RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 JAKMIP1Q96N16 626 aaKnown RBP9.6□□□□□ -0.87
HDAC6-216ENST00000468949 EHD4Q9H223 541 aa9.6□□□□□ -0.87
HDAC6-216ENST00000468949 GBA2Q9HCG7 927 aaPredicted RBP9.6□□□□□ -0.87
HDAC6-216ENST00000468949 SCAF8Q9UPN6 1271 aaKnown RBP9.6□□□□□ -0.87
HDAC6-216ENST00000468949 DDX60LQ5H9U9 1706 aaKnown RBP9.59□□□□□ -0.87
HDAC6-216ENST00000468949 WDR33Q9C0J8 1336 aaKnown RBP9.59□□□□□ -0.87
HDAC6-216ENST00000468949 FOCADQ5VW36 1801 aa9.59□□□□□ -0.87
HDAC6-216ENST00000468949 ERICH2A1L162 156 aa9.59□□□□□ -0.87
HDAC6-216ENST00000468949 DDTLA6NHG4 134 aaPredicted RBP9.59□□□□□ -0.87
HDAC6-216ENST00000468949 MPHOSPH10O00566 681 aaKnown RBP9.59□□□□□ -0.87
HDAC6-216ENST00000468949 PPP1R12BO60237 982 aaPredicted RBP9.59□□□□□ -0.87
HDAC6-216ENST00000468949 RANBP6O60518 1105 aaKnown RBP9.59□□□□□ -0.87
HDAC6-216ENST00000468949 TSPY3P0CV98 308 aa9.59□□□□□ -0.87
HDAC6-216ENST00000468949 TSPY8P0CW00 308 aa9.59□□□□□ -0.87
HDAC6-216ENST00000468949 CASTP20810 708 aaKnown RBP9.59□□□□□ -0.87
HDAC6-216ENST00000468949 NT5C2P49902 561 aa9.59□□□□□ -0.87
HDAC6-216ENST00000468949 PLCD1P51178 756 aa9.59□□□□□ -0.87
HDAC6-216ENST00000468949 HUNKP57058 714 aa9.59□□□□□ -0.87
HDAC6-216ENST00000468949 FKBP1BP68106 108 aa9.59□□□□□ -0.87
HDAC6-216ENST00000468949 PLCB2Q00722 1185 aa9.59□□□□□ -0.87
HDAC6-216ENST00000468949 NECTIN1Q15223 517 aa9.59□□□□□ -0.87
HDAC6-216ENST00000468949 BLOC1S2Q6QNY1 142 aa9.59□□□□□ -0.87
HDAC6-216ENST00000468949 C16orf86Q6ZW13 317 aa9.59□□□□□ -0.87
HDAC6-216ENST00000468949 TBC1D10CQ8IV04 446 aa9.59□□□□□ -0.87
HDAC6-216ENST00000468949 FOXP4Q8IVH2 680 aaPredicted RBP9.59□□□□□ -0.87
HDAC6-216ENST00000468949 ZFPM1Q8IX07 1006 aa9.59□□□□□ -0.87
HDAC6-216ENST00000468949 C2orf69Q8N8R5 385 aa9.59□□□□□ -0.87
HDAC6-216ENST00000468949 RNF25Q96BH1 459 aaPredicted RBP9.59□□□□□ -0.87
HDAC6-216ENST00000468949 DYNLL2Q96FJ2 89 aa9.59□□□□□ -0.87
HDAC6-216ENST00000468949 TBC1D32Q96NH3 1257 aa9.59□□□□□ -0.87
HDAC6-216ENST00000468949 ANAPC4Q9UJX5 808 aa9.59□□□□□ -0.87
HDAC6-216ENST00000468949 POLR2AP24928 1970 aaKnown RBP9.59□□□□□ -0.87
HDAC6-216ENST00000468949 LAMA4Q16363 1823 aa9.59□□□□□ -0.88
HDAC6-216ENST00000468949 E7EWF7 191 aa9.58□□□□□ -0.88
HDAC6-216ENST00000468949 PRDM1O75626 825 aa9.58□□□□□ -0.88
HDAC6-216ENST00000468949 CDK8P49336 464 aa9.58□□□□□ -0.88
HDAC6-216ENST00000468949 RBM25P49756 843 aaKnown RBP9.58□□□□□ -0.88
HDAC6-216ENST00000468949 GRM1Q13255 1194 aa9.58□□□□□ -0.88
HDAC6-216ENST00000468949 PPP4R3BQ5MIZ7 849 aa9.58□□□□□ -0.88
HDAC6-216ENST00000468949 CYP4F22Q6NT55 531 aa9.58□□□□□ -0.88
HDAC6-216ENST00000468949 IQCA1Q86XH1 822 aa9.58□□□□□ -0.88
HDAC6-216ENST00000468949 NEK1Q96PY6 1258 aa9.58□□□□□ -0.88
HDAC6-216ENST00000468949 UBAC1Q9BSL1 405 aa9.58□□□□□ -0.88
HDAC6-216ENST00000468949 ZNF341Q9BYN7 854 aa9.58□□□□□ -0.88
HDAC6-216ENST00000468949 CABP5Q9NP86 173 aa9.58□□□□□ -0.88
HDAC6-216ENST00000468949 SNX14Q9Y5W7 946 aa9.58□□□□□ -0.88
HDAC6-216ENST00000468949 CYP46A1Q9Y6A2 500 aa9.58□□□□□ -0.88
HDAC6-216ENST00000468949 MYH1P12882 1939 aa9.58□□□□□ -0.88
HDAC6-216ENST00000468949 BAZ2AQ9UIF9 1905 aaKnown RBP9.58□□□□□ -0.88
HDAC6-216ENST00000468949 SSC5DA1L4H1 1573 aa9.58□□□□□ -0.88
HDAC6-216ENST00000468949 NEDD4P46934 1319 aa9.57□□□□□ -0.88
HDAC6-216ENST00000468949 CDK5RAP2Q96SN8 1893 aa9.57□□□□□ -0.88
HDAC6-216ENST00000468949 OTOFQ9HC10 1997 aa9.57□□□□□ -0.88
HDAC6-216ENST00000468949 FAM196BA6NMK8 535 aa9.57□□□□□ -0.88
HDAC6-216ENST00000468949 B4E1Z4 1266 aa9.57□□□□□ -0.88
HDAC6-216ENST00000468949 ST18O60284 1047 aa9.57□□□□□ -0.88
HDAC6-216ENST00000468949 KDM4AO75164 1064 aa9.57□□□□□ -0.88
HDAC6-216ENST00000468949 MCM5P33992 734 aa9.57□□□□□ -0.88
HDAC6-216ENST00000468949 IREB2P48200 963 aaKnown RBP9.57□□□□□ -0.88
HDAC6-216ENST00000468949 MAP2K1Q02750 393 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-216ENST00000468949 PRKG1Q13976 671 aa9.57□□□□□ -0.88
HDAC6-216ENST00000468949 RABEP1Q15276 862 aa9.57□□□□□ -0.88
HDAC6-216ENST00000468949 CERKLQ49MI3 558 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-216ENST00000468949 CCDC178Q5BJE1 867 aa9.57□□□□□ -0.88
HDAC6-216ENST00000468949 NBPF12Q5TAG4 269 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-216ENST00000468949 PRAMEF18Q5VWM3 479 aa9.57□□□□□ -0.88
HDAC6-216ENST00000468949 DLK2Q6UY11 383 aa9.57□□□□□ -0.88
HDAC6-216ENST00000468949 MIGA2Q7L4E1 593 aa9.57□□□□□ -0.88
HDAC6-216ENST00000468949 SH3BP5LQ7L8J4 393 aa9.57□□□□□ -0.88
HDAC6-216ENST00000468949 ARMC9Q7Z3E5 817 aa9.57□□□□□ -0.88
HDAC6-216ENST00000468949 PIP4P2Q8N4L2 257 aa9.57□□□□□ -0.88
HDAC6-216ENST00000468949 SLC44A5Q8NCS7 719 aa9.57□□□□□ -0.88
HDAC6-216ENST00000468949 CCDC17Q96LX7 622 aa9.57□□□□□ -0.88
HDAC6-216ENST00000468949 TSPYL2Q9H2G4 693 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-216ENST00000468949 ORC4O43929 436 aa9.56□□□□□ -0.88
HDAC6-216ENST00000468949 TBC1D12O60347 775 aa9.56□□□□□ -0.88
HDAC6-216ENST00000468949 NOGQ13253 232 aa9.56□□□□□ -0.88
HDAC6-216ENST00000468949 ABCB5Q2M3G0 1257 aa9.56□□□□□ -0.88
HDAC6-216ENST00000468949 TSGA10IPQ3SY00 556 aa9.56□□□□□ -0.88
HDAC6-216ENST00000468949 NFXL1Q6ZNB6 911 aa9.56□□□□□ -0.88
HDAC6-216ENST00000468949 WRNIP1Q96S55 665 aa9.56□□□□□ -0.88
HDAC6-216ENST00000468949 PICK1Q9NRD5 415 aa9.56□□□□□ -0.88
HDAC6-216ENST00000468949 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-216ENST00000468949 CSADQ9Y600 493 aa9.56□□□□□ -0.88
HDAC6-216ENST00000468949 IFIT3O14879 490 aaKnown RBP9.55□□□□□ -0.88
HDAC6-216ENST00000468949 PRC1O43663 620 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 GDF11O95390 407 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 PYGBP11216 843 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 RASA1P20936 1047 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 SHMT1P34896 483 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 MAP2K2P36507 400 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 ANP32AP39687 249 aaKnown RBP9.55□□□□□ -0.88
HDAC6-216ENST00000468949 TFAP4Q01664 338 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 ATP2B2Q01814 1243 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 EVX2Q03828 476 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 GABPAQ06546 454 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 RAB3GAP1Q15042 981 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 ANKRD1Q15327 319 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 ADCK5Q3MIX3 580 aa9.55□□□□□ -0.88
HDAC6-216ENST00000468949 TMEM67Q5HYA8 995 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms