RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 KIAA1328Q86T90 577 aa5.61□□□□□ -1.51
SF3B1-207ENST00000468925 TADA2BQ86TJ2 420 aa5.61□□□□□ -1.51
SF3B1-207ENST00000468925 PLA2G4DQ86XP0 818 aa5.61□□□□□ -1.51
SF3B1-207ENST00000468925 DRC7Q8IY82 874 aa5.61□□□□□ -1.51
SF3B1-207ENST00000468925 CCDC150Q8NCX0 1101 aa5.61□□□□□ -1.51
SF3B1-207ENST00000468925 ELOA3Q8NG57 546 aa5.61□□□□□ -1.51
SF3B1-207ENST00000468925 TDRD7Q8NHU6 1098 aaKnown RBP5.61□□□□□ -1.51
SF3B1-207ENST00000468925 ABCA10Q8WWZ4 1543 aa5.61□□□□□ -1.51
SF3B1-207ENST00000468925 C16orf45Q96MC5 204 aaPredicted RBP5.61□□□□□ -1.51
SF3B1-207ENST00000468925 TESK2Q96S53 571 aa5.61□□□□□ -1.51
SF3B1-207ENST00000468925 EIF3CQ99613 913 aaKnown RBP5.61□□□□□ -1.51
SF3B1-207ENST00000468925 SH3GL3Q99963 347 aa5.61□□□□□ -1.51
SF3B1-207ENST00000468925 FANCD2Q9BXW9 1451 aa5.61□□□□□ -1.51
SF3B1-207ENST00000468925 BRD7Q9NPI1 651 aa5.61□□□□□ -1.51
SF3B1-207ENST00000468925 BATF3Q9NR55 127 aa5.61□□□□□ -1.51
SF3B1-207ENST00000468925 DDX19AQ9NUU7 478 aaKnown RBP5.61□□□□□ -1.51
SF3B1-207ENST00000468925 ZNF215Q9UL58 517 aaPredicted RBP5.61□□□□□ -1.51
SF3B1-207ENST00000468925 PYCARDQ9ULZ3 195 aa5.61□□□□□ -1.51
SF3B1-207ENST00000468925 TRAK1Q9UPV9 953 aa5.61□□□□□ -1.51
SF3B1-207ENST00000468925 CHMP3Q9Y3E7 222 aa5.61□□□□□ -1.51
SF3B1-207ENST00000468925 WDR7Q9Y4E6 1490 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 C9orf84Q5VXU9 1444 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 CCDC151A5D8V7 595 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 M0R082 166 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 MPHOSPH10O00566 681 aaKnown RBP5.6□□□□□ -1.51
SF3B1-207ENST00000468925 MAFGO15525 162 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 MARCH6O60337 910 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 COBLO75128 1261 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 NBPF7P0C2Y1 421 aaPredicted RBP5.6□□□□□ -1.51
SF3B1-207ENST00000468925 HCLS1P14317 486 aaPredicted RBP5.6□□□□□ -1.51
SF3B1-207ENST00000468925 CASTP20810 708 aaKnown RBP5.6□□□□□ -1.51
SF3B1-207ENST00000468925 ALAS2P22557 587 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 VAMP1P23763 118 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 MCM3P25205 808 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 MNAT1P51948 309 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 RWDD2BP57060 319 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 SPEM2Q0P670 501 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 SLMAPQ14BN4 828 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 ELF2Q15723 593 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 MAP3K11Q16584 847 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 LRRFIP1Q32MZ4 808 aaKnown RBP5.6□□□□□ -1.51
SF3B1-207ENST00000468925 HSP90B2PQ58FF3 399 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 TMED8Q6PL24 325 aaPredicted RBP5.6□□□□□ -1.51
SF3B1-207ENST00000468925 GBP6Q6ZN66 633 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 CCDC186Q7Z3E2 898 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 USP48Q86UV5 1035 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 TAX1BP1Q86VP1 789 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 APLFQ8IW19 511 aaPredicted RBP5.6□□□□□ -1.51
SF3B1-207ENST00000468925 LRRC8AQ8IWT6 810 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 MICALL1Q8N3F8 863 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 ZNF417Q8TAU3 575 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 BICD2Q8TD16 824 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 BHMTQ93088 406 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 MKL1Q969V6 931 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 CFAP53Q96M91 514 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 ZNF587Q96SQ5 575 aaPredicted RBP5.6□□□□□ -1.51
SF3B1-207ENST00000468925 ZSCAN16Q9H4T2 348 aaPredicted RBP5.6□□□□□ -1.51
SF3B1-207ENST00000468925 HOMER3Q9NSC5 361 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 GNL3LQ9NVN8 582 aaKnown RBP5.6□□□□□ -1.51
SF3B1-207ENST00000468925 DNAI1Q9UI46 699 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 ADAM21Q9UKJ8 722 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 ZDHHC9Q9Y397 364 aa5.6□□□□□ -1.51
SF3B1-207ENST00000468925 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.6□□□□□ -1.515e-8■■□□□ 12.1
SF3B1-207ENST00000468925 MED14O60244 1454 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 GOLGA6L19H0YKK7 550 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 U2SURPO15042 1029 aaKnown RBP5.59□□□□□ -1.51
SF3B1-207ENST00000468925 ERC2O15083 957 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 CHUKO15111 745 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 SRGAP3O43295 1099 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 MYO1BO43795 1136 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 ERLIN2O94905 339 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 RECKO95980 971 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 ALBP02768 609 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 GCFC2P16383 781 aaKnown RBP5.59□□□□□ -1.51
SF3B1-207ENST00000468925 RASA1P20936 1047 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 OAS2P29728 719 aaKnown RBP5.59□□□□□ -1.51
SF3B1-207ENST00000468925 NF2P35240 595 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 ADH7P40394 386 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 PRPHP41219 470 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 ZNF75DP51815 510 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 LMNB2Q03252 620 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 SNW1Q13573 536 aaKnown RBP5.59□□□□□ -1.51
SF3B1-207ENST00000468925 RBBP5Q15291 538 aaKnown RBP5.59□□□□□ -1.51
SF3B1-207ENST00000468925 ARHGAP29Q52LW3 1261 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 CCDC93Q567U6 631 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 AP1ARQ63HQ0 302 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 HDXQ7Z353 690 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 BRAPQ7Z569 592 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 PLEKHM2Q8IWE5 1019 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 TEX11Q8IYF3 940 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 CCAR2Q8N163 923 aaKnown RBP5.59□□□□□ -1.51
SF3B1-207ENST00000468925 CTCFLQ8NI51 663 aaPredicted RBP5.59□□□□□ -1.51
SF3B1-207ENST00000468925 FAM71BQ8TC56 605 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 MAGEC3Q8TD91 643 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 ZNF526Q8TF50 670 aaPredicted RBP5.59□□□□□ -1.51
SF3B1-207ENST00000468925 SCG3Q8WXD2 468 aaKnown RBP5.59□□□□□ -1.51
SF3B1-207ENST00000468925 RABGGTAQ92696 567 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 MIEF2Q96C03 454 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 SUSD3Q96L08 255 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 MPHOSPH8Q99549 860 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms