RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 GTF2IRD1Q9UHL9 959 aa6.66□□□□□ -1.34
GPNMB-207ENST00000468723 TPX2Q9ULW0 747 aaKnown RBP6.66□□□□□ -1.34
GPNMB-207ENST00000468723 UPK3BL1B0FP48 263 aa6.65□□□□□ -1.34
GPNMB-207ENST00000468723 UPK3BL2E5RIL1 263 aa6.65□□□□□ -1.34
GPNMB-207ENST00000468723 CST3P01034 146 aaPredicted RBP6.65□□□□□ -1.34
GPNMB-207ENST00000468723 PRNPP04156 253 aa6.65□□□□□ -1.34
GPNMB-207ENST00000468723 CEACAM5P06731 702 aa6.65□□□□□ -1.34
GPNMB-207ENST00000468723 GARTP22102 1010 aa6.65□□□□□ -1.34
GPNMB-207ENST00000468723 EIF4A3P38919 411 aaKnown RBP6.65□□□□□ -1.34
GPNMB-207ENST00000468723 ZNF574Q6ZN55 896 aaPredicted RBP6.65□□□□□ -1.34
GPNMB-207ENST00000468723 NFXL1Q6ZNB6 911 aa6.65□□□□□ -1.34
GPNMB-207ENST00000468723 CDH24Q86UP0 819 aa6.65□□□□□ -1.34
GPNMB-207ENST00000468723 VSIG10LQ86VR7 867 aa6.65□□□□□ -1.34
GPNMB-207ENST00000468723 TP53INP2Q8IXH6 220 aa6.65□□□□□ -1.34
GPNMB-207ENST00000468723 MFSD2AQ8NA29 543 aa6.65□□□□□ -1.34
GPNMB-207ENST00000468723 FLCNQ8NFG4 579 aa6.65□□□□□ -1.34
GPNMB-207ENST00000468723 ACSF2Q96CM8 615 aaPredicted RBP6.65□□□□□ -1.34
GPNMB-207ENST00000468723 PLAGL2Q9UPG8 496 aa6.65□□□□□ -1.34
GPNMB-207ENST00000468723 TACC3Q9Y6A5 838 aa6.65□□□□□ -1.34
GPNMB-207ENST00000468723 CNTNAP4Q9C0A0 1308 aa6.65□□□□□ -1.35
GPNMB-207ENST00000468723 CAP2P40123 477 aa6.64□□□□□ -1.35
GPNMB-207ENST00000468723 CD96P40200 585 aa6.64□□□□□ -1.35
GPNMB-207ENST00000468723 LETMD1Q6P1Q0 360 aa6.64□□□□□ -1.35
GPNMB-207ENST00000468723 SPRED2Q7Z698 418 aa6.64□□□□□ -1.35
GPNMB-207ENST00000468723 MRPL41Q8IXM3 137 aaKnown RBP6.64□□□□□ -1.35
GPNMB-207ENST00000468723 BCL7CQ8WUZ0 217 aaPredicted RBP6.64□□□□□ -1.35
GPNMB-207ENST00000468723 PRDM5Q9NQX1 630 aaPredicted RBP6.64□□□□□ -1.35
GPNMB-207ENST00000468723 POLR3KQ9Y2Y1 108 aaPredicted RBP6.64□□□□□ -1.35
GPNMB-207ENST00000468723 IFI16Q16666 785 aaKnown RBP6.63□□□□□ -1.35
GPNMB-207ENST00000468723 SLC6A19Q695T7 634 aa6.63□□□□□ -1.35
GPNMB-207ENST00000468723 FAM196AQ6ZSG2 479 aa6.63□□□□□ -1.35
GPNMB-207ENST00000468723 MCATQ8IVS2 390 aaKnown RBP6.63□□□□□ -1.35
GPNMB-207ENST00000468723 ZNF296Q8WUU4 475 aaPredicted RBP6.63□□□□□ -1.35
GPNMB-207ENST00000468723 ADAMTS1Q9UHI8 967 aa6.63□□□□□ -1.35
GPNMB-207ENST00000468723 SLC5A6Q9Y289 635 aa6.63□□□□□ -1.35
GPNMB-207ENST00000468723 SUPT16HQ9Y5B9 1047 aaKnown RBP6.63□□□□□ -1.35
GPNMB-207ENST00000468723 GNAT3A8MTJ3 354 aa6.62□□□□□ -1.35
GPNMB-207ENST00000468723 PRR33A8MZF0 331 aa6.62□□□□□ -1.35
GPNMB-207ENST00000468723 IGF2BP3O00425 579 aaKnown RBP eCLIP6.62□□□□□ -1.35
GPNMB-207ENST00000468723 CBX7O95931 251 aa6.62□□□□□ -1.35
GPNMB-207ENST00000468723 ZNF76P36508 570 aa6.62□□□□□ -1.35
GPNMB-207ENST00000468723 MPP2Q14168 576 aa6.62□□□□□ -1.35
GPNMB-207ENST00000468723 AOC3Q16853 763 aa6.62□□□□□ -1.35
GPNMB-207ENST00000468723 REC114Q7Z4M0 266 aa6.62□□□□□ -1.35
GPNMB-207ENST00000468723 ABI1Q8IZP0 508 aa6.62□□□□□ -1.35
GPNMB-207ENST00000468723 FAM13CQ8NE31 585 aa6.62□□□□□ -1.35
GPNMB-207ENST00000468723 FBXL18Q96ME1 805 aa6.62□□□□□ -1.35
GPNMB-207ENST00000468723 MKNK2Q9HBH9 465 aa6.62□□□□□ -1.35
GPNMB-207ENST00000468723 PAK6Q9NQU5 681 aaPredicted RBP6.62□□□□□ -1.35
GPNMB-207ENST00000468723 REV1Q9UBZ9 1251 aa6.62□□□□□ -1.35
GPNMB-207ENST00000468723 KLHL3Q9UH77 587 aa6.62□□□□□ -1.35
GPNMB-207ENST00000468723 ADAM30Q9UKF2 790 aa6.62□□□□□ -1.35
GPNMB-207ENST00000468723 TMEM265A0A087WTH1 108 aa6.61□□□□□ -1.35
GPNMB-207ENST00000468723 CHURC1-FNTBB4DL54 471 aa6.61□□□□□ -1.35
GPNMB-207ENST00000468723 GREM1O60565 184 aa6.61□□□□□ -1.35
GPNMB-207ENST00000468723 CD8BP10966 210 aa6.61□□□□□ -1.35
GPNMB-207ENST00000468723 CRKP46108 304 aa6.61□□□□□ -1.35
GPNMB-207ENST00000468723 NKPD1Q17RQ9 610 aa6.61□□□□□ -1.35
GPNMB-207ENST00000468723 SFRP5Q5T4F7 317 aa6.61□□□□□ -1.35
GPNMB-207ENST00000468723 KRTAP1-3Q8IUG1 177 aa6.61□□□□□ -1.35
GPNMB-207ENST00000468723 RGS22Q8NE09 1264 aa6.61□□□□□ -1.35
GPNMB-207ENST00000468723 BRMS1Q9HCU9 246 aa6.61□□□□□ -1.35
GPNMB-207ENST00000468723 UBP1Q9NZI7 540 aa6.61□□□□□ -1.35
GPNMB-207ENST00000468723 HTR3BO95264 441 aa6.6□□□□□ -1.35
GPNMB-207ENST00000468723 IRAK1P51617 712 aa6.6□□□□□ -1.35
GPNMB-207ENST00000468723 FANCCQ00597 558 aa6.6□□□□□ -1.35
GPNMB-207ENST00000468723 PRKCQQ04759 706 aa6.6□□□□□ -1.35
GPNMB-207ENST00000468723 CWF19L2Q2TBE0 894 aaKnown RBP6.6□□□□□ -1.35
GPNMB-207ENST00000468723 SEZ6Q53EL9 994 aa6.6□□□□□ -1.35
GPNMB-207ENST00000468723 ZNF394Q53GI3 561 aa6.6□□□□□ -1.35
GPNMB-207ENST00000468723 CDKAL1Q5VV42 579 aa6.6□□□□□ -1.35
GPNMB-207ENST00000468723 WFDC3Q8IUB2 231 aa6.6□□□□□ -1.35
GPNMB-207ENST00000468723 SPACA3Q8IXA5 215 aa6.6□□□□□ -1.35
GPNMB-207ENST00000468723 STK11IPQ8N1F8 1099 aa6.6□□□□□ -1.35
GPNMB-207ENST00000468723 MRRFQ96E11 262 aaKnown RBP6.6□□□□□ -1.35
GPNMB-207ENST00000468723 MISP3Q96FF7 219 aa6.6□□□□□ -1.35
GPNMB-207ENST00000468723 HRASLS5Q96KN8 279 aa6.6□□□□□ -1.35
GPNMB-207ENST00000468723 VAV3Q9UKW4 847 aa6.6□□□□□ -1.35
GPNMB-207ENST00000468723 MAPK8IP1Q9UQF2 711 aa6.6□□□□□ -1.35
GPNMB-207ENST00000468723 PCDHGB7Q9Y5F8 929 aa6.6□□□□□ -1.35
GPNMB-207ENST00000468723 FAM155AB1AL88 458 aaPredicted RBP6.59□□□□□ -1.35
GPNMB-207ENST00000468723 DNAJA2O60884 412 aa6.59□□□□□ -1.35
GPNMB-207ENST00000468723 RECKO95980 971 aa6.59□□□□□ -1.35
GPNMB-207ENST00000468723 YARSP54577 528 aaKnown RBP6.59□□□□□ -1.35
GPNMB-207ENST00000468723 TMEM201Q5SNT2 666 aa6.59□□□□□ -1.35
GPNMB-207ENST00000468723 USP48Q86UV5 1035 aa6.59□□□□□ -1.35
GPNMB-207ENST00000468723 TNKS2Q9H2K2 1166 aa6.59□□□□□ -1.35
GPNMB-207ENST00000468723 KCNQ5Q9NR82 932 aa6.59□□□□□ -1.35
GPNMB-207ENST00000468723 PCDHB14Q9Y5E9 798 aa6.59□□□□□ -1.35
GPNMB-207ENST00000468723 ROBO2Q9HCK4 1378 aa6.58□□□□□ -1.36
GPNMB-207ENST00000468723 PRR36Q9H6K5 1346 aa6.58□□□□□ -1.36
GPNMB-207ENST00000468723 UNCXA6NJT0 531 aa6.58□□□□□ -1.36
GPNMB-207ENST00000468723 CYP7A1P22680 504 aa6.58□□□□□ -1.36
GPNMB-207ENST00000468723 MCM4P33991 863 aa6.58□□□□□ -1.36
GPNMB-207ENST00000468723 PLCL1Q15111 1095 aa6.58□□□□□ -1.36
GPNMB-207ENST00000468723 MFSD4AQ8N468 514 aa6.58□□□□□ -1.36
GPNMB-207ENST00000468723 RNF34Q969K3 372 aa6.58□□□□□ -1.36
GPNMB-207ENST00000468723 HSPA12BQ96MM6 686 aa6.58□□□□□ -1.36
GPNMB-207ENST00000468723 SPON2Q9BUD6 331 aa6.58□□□□□ -1.36
GPNMB-207ENST00000468723 ADGRE2Q9UHX3 823 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms