RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 FASTKD5Q7L8L6 764 aaKnown RBP17.72■□□□□ 0.43
TMEM39A-205ENST00000468676 AS3MTQ9HBK9 375 aa17.72■□□□□ 0.43
TMEM39A-205ENST00000468676 APPP05067 770 aa17.71■□□□□ 0.43
TMEM39A-205ENST00000468676 RRP1BQ14684 758 aaKnown RBP17.71■□□□□ 0.43
TMEM39A-205ENST00000468676 CERKLQ49MI3 558 aaPredicted RBP17.71■□□□□ 0.43
TMEM39A-205ENST00000468676 CTR9Q6PD62 1173 aa17.71■□□□□ 0.43
TMEM39A-205ENST00000468676 PTPN18Q99952 460 aa17.71■□□□□ 0.43
TMEM39A-205ENST00000468676 PHIPQ8WWQ0 1821 aa17.7■□□□□ 0.42
TMEM39A-205ENST00000468676 A0A0G2JLL6 359 aaPredicted RBP17.7■□□□□ 0.42
TMEM39A-205ENST00000468676 MFAP1P55081 439 aaKnown RBP17.7■□□□□ 0.42
TMEM39A-205ENST00000468676 MCMDC2Q4G0Z9 681 aa17.7■□□□□ 0.42
TMEM39A-205ENST00000468676 TTC22Q5TAA0 569 aa17.7■□□□□ 0.42
TMEM39A-205ENST00000468676 ERICH6BQ5W0A0 696 aa17.7■□□□□ 0.42
TMEM39A-205ENST00000468676 PRRT2Q7Z6L0 340 aaPredicted RBP17.7■□□□□ 0.42
TMEM39A-205ENST00000468676 ZNF280CQ8ND82 737 aa17.7■□□□□ 0.42
TMEM39A-205ENST00000468676 CCDC136Q96JN2 1154 aa17.7■□□□□ 0.42
TMEM39A-205ENST00000468676 SEC62Q99442 399 aaKnown RBP17.7■□□□□ 0.42
TMEM39A-205ENST00000468676 WDR18Q9BV38 432 aa17.7■□□□□ 0.42
TMEM39A-205ENST00000468676 CABP5Q9NP86 173 aa17.7■□□□□ 0.42
TMEM39A-205ENST00000468676 TSKSQ9UJT2 592 aa17.7■□□□□ 0.42
TMEM39A-205ENST00000468676 ZBTB21Q9ULJ3 1066 aa17.7■□□□□ 0.42
TMEM39A-205ENST00000468676 TBC1D8O95759 1140 aa17.69■□□□□ 0.42
TMEM39A-205ENST00000468676 CYP2D6P10635 497 aa17.69■□□□□ 0.42
TMEM39A-205ENST00000468676 SDSP20132 328 aa17.69■□□□□ 0.42
TMEM39A-205ENST00000468676 SHMT1P34896 483 aa17.69■□□□□ 0.42
TMEM39A-205ENST00000468676 TDO2P48775 406 aa17.69■□□□□ 0.42
TMEM39A-205ENST00000468676 ABCB5Q2M3G0 1257 aa17.69■□□□□ 0.42
TMEM39A-205ENST00000468676 ANKRD23Q86SG2 305 aa17.69■□□□□ 0.42
TMEM39A-205ENST00000468676 TRIM75PA6NK02 468 aa17.68■□□□□ 0.42
TMEM39A-205ENST00000468676 BTBD19C9JJ37 291 aa17.68■□□□□ 0.42
TMEM39A-205ENST00000468676 GDF11O95390 407 aa17.68■□□□□ 0.42
TMEM39A-205ENST00000468676 GH2P01242 217 aa17.68■□□□□ 0.42
TMEM39A-205ENST00000468676 SPP2Q13103 211 aa17.68■□□□□ 0.42
TMEM39A-205ENST00000468676 C16orf86Q6ZW13 317 aa17.68■□□□□ 0.42
TMEM39A-205ENST00000468676 IFNL3Q8IZI9 196 aa17.68■□□□□ 0.42
TMEM39A-205ENST00000468676 CCDC17Q96LX7 622 aa17.68■□□□□ 0.42
TMEM39A-205ENST00000468676 ZNF287Q9HBT7 754 aa17.68■□□□□ 0.42
TMEM39A-205ENST00000468676 ZFYVE28Q9HCC9 887 aa17.68■□□□□ 0.42
TMEM39A-205ENST00000468676 DIAPH3Q9NSV4 1193 aa17.68■□□□□ 0.42
TMEM39A-205ENST00000468676 PTPRFP10586 1907 aa17.68■□□□□ 0.42
TMEM39A-205ENST00000468676 MYH8P13535 1937 aa17.68■□□□□ 0.42
TMEM39A-205ENST00000468676 CASP8AP2Q9UKL3 1982 aa17.68■□□□□ 0.42
TMEM39A-205ENST00000468676 NMIQ13287 307 aaPredicted RBP17.67■□□□□ 0.42
TMEM39A-205ENST00000468676 TAF1CQ15572 869 aaPredicted RBP17.67■□□□□ 0.42
TMEM39A-205ENST00000468676 FAM43AQ8N2R8 423 aa17.67■□□□□ 0.42
TMEM39A-205ENST00000468676 PROCA1Q8NCQ7 364 aaPredicted RBP17.67■□□□□ 0.42
TMEM39A-205ENST00000468676 FAM227BQ96M60 508 aa17.67■□□□□ 0.42
TMEM39A-205ENST00000468676 NAPBQ9H115 298 aa17.67■□□□□ 0.42
TMEM39A-205ENST00000468676 SLC45A1Q9Y2W3 748 aa17.67■□□□□ 0.42
TMEM39A-205ENST00000468676 CYP2D7A0A087X1C5 515 aa17.66■□□□□ 0.42
TMEM39A-205ENST00000468676 A0A0D9SFI3 127 aa17.66■□□□□ 0.42
TMEM39A-205ENST00000468676 MINDY4BA8MYZ0 360 aa17.66■□□□□ 0.42
TMEM39A-205ENST00000468676 C19orf81C9J6K1 198 aa17.66■□□□□ 0.42
TMEM39A-205ENST00000468676 GPR25O00155 361 aa17.66■□□□□ 0.42
TMEM39A-205ENST00000468676 SLC3A2P08195 630 aaKnown RBP17.66■□□□□ 0.42
TMEM39A-205ENST00000468676 CDK8P49336 464 aa17.66■□□□□ 0.42
TMEM39A-205ENST00000468676 JAG1P78504 1218 aa17.66■□□□□ 0.42
TMEM39A-205ENST00000468676 CRHR2Q13324 411 aa17.66■□□□□ 0.42
TMEM39A-205ENST00000468676 MOGSQ13724 837 aa17.66■□□□□ 0.42
TMEM39A-205ENST00000468676 DYNLL2Q96FJ2 89 aa17.66■□□□□ 0.42
TMEM39A-205ENST00000468676 EPB41L4AQ9HCS5 686 aaPredicted RBP17.66■□□□□ 0.42
TMEM39A-205ENST00000468676 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.66■□□□□ 0.42
TMEM39A-205ENST00000468676 USP17L10C9JJH3 530 aa17.65■□□□□ 0.42
TMEM39A-205ENST00000468676 PDHXO00330 501 aa17.65■□□□□ 0.42
TMEM39A-205ENST00000468676 BACE1P56817 501 aa17.65■□□□□ 0.42
TMEM39A-205ENST00000468676 RAB3GAP1Q15042 981 aa17.65■□□□□ 0.42
TMEM39A-205ENST00000468676 ALX1Q15699 326 aa17.65■□□□□ 0.42
TMEM39A-205ENST00000468676 SH3D19Q5HYK7 790 aa17.65■□□□□ 0.42
TMEM39A-205ENST00000468676 GADL1Q6ZQY3 521 aa17.65■□□□□ 0.42
TMEM39A-205ENST00000468676 CCDC129Q6ZRS4 1044 aa17.65■□□□□ 0.42
TMEM39A-205ENST00000468676 TMEM179Q6ZVK1 233 aa17.65■□□□□ 0.42
TMEM39A-205ENST00000468676 CCDC84Q86UT8 332 aaPredicted RBP17.65■□□□□ 0.42
TMEM39A-205ENST00000468676 ROBO3Q96MS0 1386 aa17.65■□□□□ 0.42
TMEM39A-205ENST00000468676 MPHOSPH10O00566 681 aaKnown RBP17.64■□□□□ 0.41
TMEM39A-205ENST00000468676 GSPT1P15170 499 aaKnown RBP17.64■□□□□ 0.41
TMEM39A-205ENST00000468676 EVX2Q03828 476 aa17.64■□□□□ 0.41
TMEM39A-205ENST00000468676 PABPC4Q13310 644 aaKnown RBP eCLIP17.64■□□□□ 0.41
TMEM39A-205ENST00000468676 COL13A1Q5TAT6 717 aaPredicted RBP17.64■□□□□ 0.41
TMEM39A-205ENST00000468676 GPAT2Q6NUI2 795 aa17.64■□□□□ 0.41
TMEM39A-205ENST00000468676 SLC44A5Q8NCS7 719 aa17.64■□□□□ 0.41
TMEM39A-205ENST00000468676 MKNK2Q9HBH9 465 aa17.64■□□□□ 0.41
TMEM39A-205ENST00000468676 TMOD4Q9NZQ9 345 aa17.64■□□□□ 0.41
TMEM39A-205ENST00000468676 AGTPBP1Q9UPW5 1226 aa17.64■□□□□ 0.41
TMEM39A-205ENST00000468676 CCDC171Q6TFL3 1326 aa17.64■□□□□ 0.41
TMEM39A-205ENST00000468676 TLR2O60603 784 aa17.63■□□□□ 0.41
TMEM39A-205ENST00000468676 FKTNO75072 461 aa17.63■□□□□ 0.41
TMEM39A-205ENST00000468676 USP14P54578 494 aa17.63■□□□□ 0.41
TMEM39A-205ENST00000468676 HMGCS2P54868 508 aa17.63■□□□□ 0.41
TMEM39A-205ENST00000468676 SHROOM1Q2M3G4 852 aaPredicted RBP17.63■□□□□ 0.41
TMEM39A-205ENST00000468676 CWC27Q6UX04 472 aaKnown RBP17.63■□□□□ 0.41
TMEM39A-205ENST00000468676 ZNF296Q8WUU4 475 aaPredicted RBP17.63■□□□□ 0.41
TMEM39A-205ENST00000468676 PARK7Q99497 189 aaKnown RBP17.63■□□□□ 0.41
TMEM39A-205ENST00000468676 HSPD1P10809 573 aaKnown RBP17.62■□□□□ 0.41
TMEM39A-205ENST00000468676 PDE4BQ07343 736 aa17.62■□□□□ 0.41
TMEM39A-205ENST00000468676 MTMR2Q13614 643 aa17.62■□□□□ 0.41
TMEM39A-205ENST00000468676 SEPT2Q15019 361 aa17.62■□□□□ 0.41
TMEM39A-205ENST00000468676 USP17L2Q6R6M4 530 aa17.62■□□□□ 0.41
TMEM39A-205ENST00000468676 RUFY2Q8WXA3 655 aa17.62■□□□□ 0.41
TMEM39A-205ENST00000468676 R3HDMLQ9H3Y0 253 aa17.62■□□□□ 0.41
TMEM39A-205ENST00000468676 PNMA3Q9UL41 463 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms