RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 RASA1P20936 1047 aa24.06■■□□□ 1.44
TMEM53-207ENST00000468117 RASSF7Q02833 373 aa24.06■■□□□ 1.44
TMEM53-207ENST00000468117 ZNF287Q9HBT7 754 aa24.06■■□□□ 1.44
TMEM53-207ENST00000468117 PDIA4P13667 645 aaKnown RBP24.05■■□□□ 1.44
TMEM53-207ENST00000468117 TTC6Q86TZ1 520 aa24.05■■□□□ 1.44
TMEM53-207ENST00000468117 ZFPM1Q8IX07 1006 aa24.05■■□□□ 1.44
TMEM53-207ENST00000468117 NUP133Q8WUM0 1156 aa24.05■■□□□ 1.44
TMEM53-207ENST00000468117 PRMT6Q96LA8 375 aaPredicted RBP24.05■■□□□ 1.44
TMEM53-207ENST00000468117 TDRD3Q9H7E2 651 aaKnown RBP24.05■■□□□ 1.44
TMEM53-207ENST00000468117 TSPY3P0CV98 308 aa24.05■■□□□ 1.44
TMEM53-207ENST00000468117 TSPY8P0CW00 308 aa24.05■■□□□ 1.44
TMEM53-207ENST00000468117 FOSBP53539 338 aa24.05■■□□□ 1.44
TMEM53-207ENST00000468117 IL17RBQ9NRM6 502 aa24.05■■□□□ 1.44
TMEM53-207ENST00000468117 KIF3AQ9Y496 699 aa24.05■■□□□ 1.44
TMEM53-207ENST00000468117 NID2Q14112 1375 aa24.04■■□□□ 1.44
TMEM53-207ENST00000468117 TCP10Q12799 353 aa24.04■■□□□ 1.44
TMEM53-207ENST00000468117 LTBP3Q9NS15 1303 aa24.03■■□□□ 1.44
TMEM53-207ENST00000468117 GOLGA6L22H0YM25 854 aa24.03■■□□□ 1.44
TMEM53-207ENST00000468117 NT5C2P49902 561 aa24.03■■□□□ 1.44
TMEM53-207ENST00000468117 NTRK3Q16288 839 aa24.03■■□□□ 1.44
TMEM53-207ENST00000468117 FERMT3Q86UX7 667 aa24.03■■□□□ 1.44
TMEM53-207ENST00000468117 OGFOD1Q8N543 542 aa24.03■■□□□ 1.44
TMEM53-207ENST00000468117 IDI2Q9BXS1 227 aa24.03■■□□□ 1.44
TMEM53-207ENST00000468117 ORC3Q9UBD5 711 aaPredicted RBP24.03■■□□□ 1.44
TMEM53-207ENST00000468117 FAM198AQ9UFP1 575 aa24.03■■□□□ 1.44
TMEM53-207ENST00000468117 H3BQV1 296 aa24.03■■□□□ 1.44
TMEM53-207ENST00000468117 RTN1Q16799 776 aa24.03■■□□□ 1.44
TMEM53-207ENST00000468117 IFFO2Q5TF58 517 aa24.03■■□□□ 1.44
TMEM53-207ENST00000468117 RCSD1Q6JBY9 416 aa24.03■■□□□ 1.44
TMEM53-207ENST00000468117 ILDR2Q71H61 639 aa24.03■■□□□ 1.44
TMEM53-207ENST00000468117 FANCBQ8NB91 859 aa24.03■■□□□ 1.44
TMEM53-207ENST00000468117 PHKBQ93100 1093 aa24.03■■□□□ 1.44
TMEM53-207ENST00000468117 HDAC9Q9UKV0 1011 aa24.03■■□□□ 1.44
TMEM53-207ENST00000468117 SIPA1L1O43166 1804 aa24.02■■□□□ 1.44
TMEM53-207ENST00000468117 MYH6P13533 1939 aa24.02■■□□□ 1.44
TMEM53-207ENST00000468117 PRELPP51888 382 aa24.02■■□□□ 1.44
TMEM53-207ENST00000468117 RCAN1P53805 252 aa24.02■■□□□ 1.44
TMEM53-207ENST00000468117 GABPAQ06546 454 aa24.02■■□□□ 1.44
TMEM53-207ENST00000468117 CIAPIN1Q6FI81 312 aa24.02■■□□□ 1.44
TMEM53-207ENST00000468117 CPLX2Q6PUV4 134 aaKnown RBP24.02■■□□□ 1.44
TMEM53-207ENST00000468117 CATIPQ7Z7H3 387 aa24.02■■□□□ 1.44
TMEM53-207ENST00000468117 AGBL3Q8NEM8 1001 aa24.02■■□□□ 1.44
TMEM53-207ENST00000468117 FHDC1Q9C0D6 1143 aaPredicted RBP24.02■■□□□ 1.44
TMEM53-207ENST00000468117 CDKL5O76039 1030 aa24.01■■□□□ 1.43
TMEM53-207ENST00000468117 SERPINB13Q9UIV8 391 aa24.01■■□□□ 1.43
TMEM53-207ENST00000468117 SPDYE2BA6NHP3 402 aa24.01■■□□□ 1.43
TMEM53-207ENST00000468117 SPDYE6P0CI01 402 aa24.01■■□□□ 1.43
TMEM53-207ENST00000468117 TROAPQ12815 778 aa24■■□□□ 1.43
TMEM53-207ENST00000468117 HLA-DOAP06340 250 aa24■■□□□ 1.43
TMEM53-207ENST00000468117 DLGAP5Q15398 846 aa24■■□□□ 1.43
TMEM53-207ENST00000468117 CMTR1Q8N1G2 835 aaKnown RBP24■■□□□ 1.43
TMEM53-207ENST00000468117 TCP11L1Q9NUJ3 509 aa24■■□□□ 1.43
TMEM53-207ENST00000468117 ATP6V1DQ9Y5K8 247 aa24■■□□□ 1.43
TMEM53-207ENST00000468117 DDTLA6NHG4 134 aaPredicted RBP23.99■■□□□ 1.43
TMEM53-207ENST00000468117 GUCY1B3Q02153 619 aa23.99■■□□□ 1.43
TMEM53-207ENST00000468117 DGKHQ86XP1 1220 aa23.99■■□□□ 1.43
TMEM53-207ENST00000468117 CCDC196A0A1B0GTZ2 297 aa23.98■■□□□ 1.43
TMEM53-207ENST00000468117 SLURP2P0DP57 97 aa23.98■■□□□ 1.43
TMEM53-207ENST00000468117 ZSCAN29Q8IWY8 852 aaPredicted RBP23.98■■□□□ 1.43
TMEM53-207ENST00000468117 CCDC82Q8N4S0 544 aa23.98■■□□□ 1.43
TMEM53-207ENST00000468117 NPM3O75607 178 aaKnown RBP23.98■■□□□ 1.43
TMEM53-207ENST00000468117 IFNAR1P17181 557 aa23.98■■□□□ 1.43
TMEM53-207ENST00000468117 TNIP1Q15025 636 aa23.98■■□□□ 1.43
TMEM53-207ENST00000468117 SH3BP5LQ7L8J4 393 aa23.98■■□□□ 1.43
TMEM53-207ENST00000468117 NEDD1Q8NHV4 660 aa23.98■■□□□ 1.43
TMEM53-207ENST00000468117 DHX36Q9H2U1 1008 aaKnown RBP23.98■■□□□ 1.43
TMEM53-207ENST00000468117 STX8Q9UNK0 236 aa23.98■■□□□ 1.43
TMEM53-207ENST00000468117 BAZ2BQ9UIF8 2168 aaKnown RBP23.97■■□□□ 1.43
TMEM53-207ENST00000468117 CLRN2A0PK11 232 aa23.97■■□□□ 1.43
TMEM53-207ENST00000468117 TRAK2O60296 914 aa23.97■■□□□ 1.43
TMEM53-207ENST00000468117 PRPF40AO75400 957 aaKnown RBP23.97■■□□□ 1.43
TMEM53-207ENST00000468117 DDAH1O94760 285 aa23.97■■□□□ 1.43
TMEM53-207ENST00000468117 AIFM3Q96NN9 605 aa23.97■■□□□ 1.43
TMEM53-207ENST00000468117 SLC26A6Q9BXS9 759 aa23.97■■□□□ 1.43
TMEM53-207ENST00000468117 KAT14Q9H8E8 782 aa23.97■■□□□ 1.43
TMEM53-207ENST00000468117 GDPD2Q9HCC8 539 aa23.97■■□□□ 1.43
TMEM53-207ENST00000468117 GJB4Q9NTQ9 266 aa23.97■■□□□ 1.43
TMEM53-207ENST00000468117 LMBRD1Q9NUN5 540 aa23.97■■□□□ 1.43
TMEM53-207ENST00000468117 SWAP70Q9UH65 585 aa23.97■■□□□ 1.43
TMEM53-207ENST00000468117 MYH15Q9Y2K3 1946 aa23.97■■□□□ 1.43
TMEM53-207ENST00000468117 UBE2Q2LH0YL09 131 aa23.96■■□□□ 1.43
TMEM53-207ENST00000468117 CALM1P0DP23 149 aa23.96■■□□□ 1.43
TMEM53-207ENST00000468117 CALM2P0DP24 149 aa23.96■■□□□ 1.43
TMEM53-207ENST00000468117 CALM3P0DP25 149 aa23.96■■□□□ 1.43
TMEM53-207ENST00000468117 CCDC178Q5BJE1 867 aa23.96■■□□□ 1.43
TMEM53-207ENST00000468117 OTUD7BQ6GQQ9 843 aa23.96■■□□□ 1.43
TMEM53-207ENST00000468117 FAM173BQ6P4H8 233 aa23.96■■□□□ 1.43
TMEM53-207ENST00000468117 ANKS1AQ92625 1134 aa23.96■■□□□ 1.43
TMEM53-207ENST00000468117 C8orf76Q96K31 380 aa23.96■■□□□ 1.43
TMEM53-207ENST00000468117 SHTN1A0MZ66 631 aa23.96■■□□□ 1.43
TMEM53-207ENST00000468117 SHMT1P34896 483 aa23.96■■□□□ 1.43
TMEM53-207ENST00000468117 DNM1Q05193 864 aaKnown RBP23.96■■□□□ 1.43
TMEM53-207ENST00000468117 SSRP1Q08945 709 aaKnown RBP23.96■■□□□ 1.43
TMEM53-207ENST00000468117 PPP2R5BQ15173 497 aa23.96■■□□□ 1.43
TMEM53-207ENST00000468117 EHD4Q9H223 541 aa23.96■■□□□ 1.43
TMEM53-207ENST00000468117 CNPY2Q9Y2B0 182 aa23.96■■□□□ 1.43
TMEM53-207ENST00000468117 FMNL1O95466 1100 aaPredicted RBP23.95■■□□□ 1.42
TMEM53-207ENST00000468117 PTMSP20962 102 aa23.95■■□□□ 1.42
TMEM53-207ENST00000468117 NBPF11Q86T75 865 aa23.95■■□□□ 1.42
TMEM53-207ENST00000468117 PNMA1Q8ND90 353 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms