RNA–Protein interactions for RNA: ENST00000467998.1

CGN-205, Transcript of cingulin, humanhuman

TSL 2

Gene CGN, Length 930 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGN-205ENST00000467998 MIGA1Q8NAN2 632 aa16.28■□□□□ 0.2
CGN-205ENST00000467998 DPF3Q92784 378 aa16.28■□□□□ 0.2
CGN-205ENST00000467998 SIPA1L1O43166 1804 aa16.28■□□□□ 0.2
CGN-205ENST00000467998 C19orf81C9J6K1 198 aa16.27■□□□□ 0.2
CGN-205ENST00000467998 H0YGN5 161 aa16.27■□□□□ 0.2
CGN-205ENST00000467998 GDF11O95390 407 aa16.27■□□□□ 0.2
CGN-205ENST00000467998 SGPL1O95470 568 aa16.27■□□□□ 0.2
CGN-205ENST00000467998 MS4A1P11836 297 aa16.27■□□□□ 0.2
CGN-205ENST00000467998 USP5P45974 858 aa16.27■□□□□ 0.2
CGN-205ENST00000467998 IRX3P78415 501 aaPredicted RBP16.27■□□□□ 0.2
CGN-205ENST00000467998 UBE2Q1Q7Z7E8 422 aa16.27■□□□□ 0.2
CGN-205ENST00000467998 ANTXR1Q9H6X2 564 aa16.27■□□□□ 0.2
CGN-205ENST00000467998 ZBTB21Q9ULJ3 1066 aa16.27■□□□□ 0.2
CGN-205ENST00000467998 NDUFB9Q9Y6M9 179 aa16.27■□□□□ 0.2
CGN-205ENST00000467998 USP17L10C9JJH3 530 aa16.26■□□□□ 0.19
CGN-205ENST00000467998 HOXA7P31268 230 aaPredicted RBP16.26■□□□□ 0.19
CGN-205ENST00000467998 SHROOM1Q2M3G4 852 aaPredicted RBP16.26■□□□□ 0.19
CGN-205ENST00000467998 HTATIP2Q9BUP3 242 aa16.26■□□□□ 0.19
CGN-205ENST00000467998 MYO5AQ9Y4I1 1855 aaKnown RBP16.26■□□□□ 0.19
CGN-205ENST00000467998 FOCADQ5VW36 1801 aa16.26■□□□□ 0.19
CGN-205ENST00000467998 CDK5RAP2Q96SN8 1893 aa16.25■□□□□ 0.19
CGN-205ENST00000467998 FARP2O94887 1054 aaPredicted RBP16.25■□□□□ 0.19
CGN-205ENST00000467998 TFRCP02786 760 aaKnown RBP16.25■□□□□ 0.19
CGN-205ENST00000467998 CAPN2P17655 700 aa16.25■□□□□ 0.19
CGN-205ENST00000467998 TMED8Q6PL24 325 aaPredicted RBP16.25■□□□□ 0.19
CGN-205ENST00000467998 RHPN1Q8TCX5 695 aa16.25■□□□□ 0.19
CGN-205ENST00000467998 DEFB118Q96PH6 123 aa16.25■□□□□ 0.19
CGN-205ENST00000467998 P2RX7Q99572 595 aaKnown RBP16.25■□□□□ 0.19
CGN-205ENST00000467998 IL1RAPL2Q9NP60 686 aa16.25■□□□□ 0.19
CGN-205ENST00000467998 MORF4L1Q9UBU8 362 aa16.25■□□□□ 0.19
CGN-205ENST00000467998 COLQQ9Y215 455 aaPredicted RBP16.25■□□□□ 0.19
CGN-205ENST00000467998 GH2P01242 217 aa16.24■□□□□ 0.19
CGN-205ENST00000467998 PAK6Q9NQU5 681 aaPredicted RBP16.24■□□□□ 0.19
CGN-205ENST00000467998 GJD2Q9UKL4 321 aa16.24■□□□□ 0.19
CGN-205ENST00000467998 HMMRO75330 724 aa16.23■□□□□ 0.19
CGN-205ENST00000467998 HMGCRP04035 888 aa16.23■□□□□ 0.19
CGN-205ENST00000467998 HERVK_113P62684 666 aa16.23■□□□□ 0.19
CGN-205ENST00000467998 TTF1Q15361 905 aaPredicted RBP16.23■□□□□ 0.19
CGN-205ENST00000467998 TATDN1Q6P1N9 297 aa16.23■□□□□ 0.19
CGN-205ENST00000467998 TTC6Q86TZ1 520 aa16.23■□□□□ 0.19
CGN-205ENST00000467998 RPAP2Q8IXW5 612 aaPredicted RBP16.23■□□□□ 0.19
CGN-205ENST00000467998 CLASRPQ8N2M8 674 aaKnown RBP16.23■□□□□ 0.19
CGN-205ENST00000467998 GPRC5AQ8NFJ5 357 aa16.23■□□□□ 0.19
CGN-205ENST00000467998 KIF1BPQ96EK5 621 aa16.23■□□□□ 0.19
CGN-205ENST00000467998 EHD4Q9H223 541 aa16.23■□□□□ 0.19
CGN-205ENST00000467998 EMILIN3Q9NT22 766 aa16.23■□□□□ 0.19
CGN-205ENST00000467998 SERPINB13Q9UIV8 391 aa16.23■□□□□ 0.19
CGN-205ENST00000467998 APBB1O00213 710 aa16.22■□□□□ 0.19
CGN-205ENST00000467998 IFIT2P09913 472 aaKnown RBP16.22■□□□□ 0.19
CGN-205ENST00000467998 USP17L2Q6R6M4 530 aa16.22■□□□□ 0.19
CGN-205ENST00000467998 DDX19BQ9UMR2 479 aa16.22■□□□□ 0.19
CGN-205ENST00000467998 MAGEB6P1A0A0J9YX57 407 aa16.21■□□□□ 0.19
CGN-205ENST00000467998 PEX10O60683 326 aa16.21■□□□□ 0.19
CGN-205ENST00000467998 FXR1P51114 621 aaKnown RBP eCLIP16.21■□□□□ 0.19
CGN-205ENST00000467998 RAB3GAP1Q15042 981 aa16.21■□□□□ 0.19
CGN-205ENST00000467998 CERKLQ49MI3 558 aaPredicted RBP16.21■□□□□ 0.19
CGN-205ENST00000467998 SLC9C2Q5TAH2 1124 aa16.21■□□□□ 0.19
CGN-205ENST00000467998 CCAR1Q8IX12 1150 aaKnown RBP16.21■□□□□ 0.19
CGN-205ENST00000467998 FEZ1Q99689 392 aa16.21■□□□□ 0.19
CGN-205ENST00000467998 RIOK1Q9BRS2 568 aaKnown RBP16.21■□□□□ 0.19
CGN-205ENST00000467998 CRISPLD2Q9H0B8 497 aa16.21■□□□□ 0.19
CGN-205ENST00000467998 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.21■□□□□ 0.19
CGN-205ENST00000467998 BCL11AQ9H165 835 aa16.21■□□□□ 0.19
CGN-205ENST00000467998 TXNRD2Q9NNW7 524 aa16.21■□□□□ 0.19
CGN-205ENST00000467998 ZBTB40Q9NUA8 1239 aa16.21■□□□□ 0.19
CGN-205ENST00000467998 RBPJLQ9UBG7 517 aa16.21■□□□□ 0.19
CGN-205ENST00000467998 COG6Q9Y2V7 657 aa16.21■□□□□ 0.19
CGN-205ENST00000467998 NR2E3Q9Y5X4 410 aa16.21■□□□□ 0.19
CGN-205ENST00000467998 RPTORQ8N122 1335 aa16.2■□□□□ 0.18
CGN-205ENST00000467998 POLR3DP05423 398 aaPredicted RBP16.2■□□□□ 0.18
CGN-205ENST00000467998 CYP2B6P20813 491 aa16.2■□□□□ 0.18
CGN-205ENST00000467998 PLCD1P51178 756 aa16.2■□□□□ 0.18
CGN-205ENST00000467998 ZYXQ15942 572 aaKnown RBP16.2■□□□□ 0.18
CGN-205ENST00000467998 ABCB5Q2M3G0 1257 aa16.2■□□□□ 0.18
CGN-205ENST00000467998 CHRDL2Q6WN34 429 aa16.2■□□□□ 0.18
CGN-205ENST00000467998 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.2■□□□□ 0.18
CGN-205ENST00000467998 GTF3C2Q8WUA4 911 aaPredicted RBP16.2■□□□□ 0.18
CGN-205ENST00000467998 DNAJC2Q99543 621 aaKnown RBP16.2■□□□□ 0.18
CGN-205ENST00000467998 NUDT12Q9BQG2 462 aa16.2■□□□□ 0.18
CGN-205ENST00000467998 HMX1Q9NP08 348 aaPredicted RBP16.2■□□□□ 0.18
CGN-205ENST00000467998 CABP5Q9NP86 173 aa16.2■□□□□ 0.18
CGN-205ENST00000467998 MYH1P12882 1939 aa16.19■□□□□ 0.18
CGN-205ENST00000467998 DOCK3Q8IZD9 2030 aa16.19■□□□□ 0.18
CGN-205ENST00000467998 GOLIM4O00461 696 aa16.19■□□□□ 0.18
CGN-205ENST00000467998 PDE6AP16499 860 aa16.19■□□□□ 0.18
CGN-205ENST00000467998 MAPK4P31152 587 aa16.19■□□□□ 0.18
CGN-205ENST00000467998 USP14P54578 494 aa16.19■□□□□ 0.18
CGN-205ENST00000467998 ERVK-9P63128 1117 aa16.19■□□□□ 0.18
CGN-205ENST00000467998 ERVK-24P63145 666 aa16.19■□□□□ 0.18
CGN-205ENST00000467998 TRIM32Q13049 653 aa16.19■□□□□ 0.18
CGN-205ENST00000467998 PDE3AQ14432 1141 aa16.19■□□□□ 0.18
CGN-205ENST00000467998 SIRT2Q8IXJ6 389 aa16.19■□□□□ 0.18
CGN-205ENST00000467998 SOCS4Q8WXH5 440 aa16.19■□□□□ 0.18
CGN-205ENST00000467998 C12orf42Q96LP6 360 aa16.19■□□□□ 0.18
CGN-205ENST00000467998 PAGR1Q9BTK6 254 aa16.19■□□□□ 0.18
CGN-205ENST00000467998 CRNKL1Q9BZJ0 848 aaKnown RBP16.19■□□□□ 0.18
CGN-205ENST00000467998 CHMP4BQ9H444 224 aaKnown RBP16.19■□□□□ 0.18
CGN-205ENST00000467998 ZNF532Q9HCE3 1301 aa16.19■□□□□ 0.18
CGN-205ENST00000467998 USP17L15C9J2P7 530 aa16.18■□□□□ 0.18
CGN-205ENST00000467998 USP17L13C9JLJ4 530 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms