RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 TMOD4Q9NZQ9 345 aa21.11■□□□□ 0.97
TRIM56-203ENST00000467847 SAP30BPQ9UHR5 308 aaKnown RBP21.11■□□□□ 0.97
TRIM56-203ENST00000467847 MYH1P12882 1939 aa21.1■□□□□ 0.97
TRIM56-203ENST00000467847 ZBTB7BO15156 539 aaPredicted RBP21.1■□□□□ 0.97
TRIM56-203ENST00000467847 BACE1P56817 501 aa21.1■□□□□ 0.97
TRIM56-203ENST00000467847 IRX3P78415 501 aaPredicted RBP21.1■□□□□ 0.97
TRIM56-203ENST00000467847 GDF11O95390 407 aa21.09■□□□□ 0.97
TRIM56-203ENST00000467847 HLA-DOAP06340 250 aa21.09■□□□□ 0.97
TRIM56-203ENST00000467847 CYP7A1P22680 504 aa21.09■□□□□ 0.97
TRIM56-203ENST00000467847 DYNLL1P63167 89 aaKnown RBP21.09■□□□□ 0.97
TRIM56-203ENST00000467847 JAG1P78504 1218 aa21.09■□□□□ 0.97
TRIM56-203ENST00000467847 METTL16Q86W50 562 aaKnown RBP21.09■□□□□ 0.97
TRIM56-203ENST00000467847 PAK6Q9NQU5 681 aaPredicted RBP21.09■□□□□ 0.97
TRIM56-203ENST00000467847 IDH1O75874 414 aaKnown RBP21.08■□□□□ 0.97
TRIM56-203ENST00000467847 CAPN2P17655 700 aa21.08■□□□□ 0.97
TRIM56-203ENST00000467847 SHROOM1Q2M3G4 852 aaPredicted RBP21.08■□□□□ 0.97
TRIM56-203ENST00000467847 EAF2Q96CJ1 260 aaPredicted RBP21.08■□□□□ 0.97
TRIM56-203ENST00000467847 GINM1Q9NU53 330 aa21.08■□□□□ 0.97
TRIM56-203ENST00000467847 ZBTB21Q9ULJ3 1066 aa21.08■□□□□ 0.97
TRIM56-203ENST00000467847 C19orf81C9J6K1 198 aa21.07■□□□□ 0.96
TRIM56-203ENST00000467847 USP17L10C9JJH3 530 aa21.07■□□□□ 0.96
TRIM56-203ENST00000467847 HMGCRP04035 888 aa21.07■□□□□ 0.96
TRIM56-203ENST00000467847 MIGA1Q8NAN2 632 aa21.07■□□□□ 0.96
TRIM56-203ENST00000467847 MORF4L1Q9UBU8 362 aa21.07■□□□□ 0.96
TRIM56-203ENST00000467847 PLXNB2O15031 1838 aa21.06■□□□□ 0.96
TRIM56-203ENST00000467847 HOXA7P31268 230 aaPredicted RBP21.06■□□□□ 0.96
TRIM56-203ENST00000467847 CEP85Q6P2H3 762 aa21.06■□□□□ 0.96
TRIM56-203ENST00000467847 P2RX7Q99572 595 aaKnown RBP21.06■□□□□ 0.96
TRIM56-203ENST00000467847 CRISPLD2Q9H0B8 497 aa21.06■□□□□ 0.96
TRIM56-203ENST00000467847 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.06■□□□□ 0.96
TRIM56-203ENST00000467847 GJD2Q9UKL4 321 aa21.06■□□□□ 0.96
TRIM56-203ENST00000467847 HERVK_113P62684 666 aa21.05■□□□□ 0.96
TRIM56-203ENST00000467847 CERS3Q8IU89 383 aa21.05■□□□□ 0.96
TRIM56-203ENST00000467847 MAGEB6Q8N7X4 407 aa21.05■□□□□ 0.96
TRIM56-203ENST00000467847 NDUFB9Q9Y6M9 179 aa21.05■□□□□ 0.96
TRIM56-203ENST00000467847 EVI5O60447 810 aa21.04■□□□□ 0.96
TRIM56-203ENST00000467847 USP5P45974 858 aa21.04■□□□□ 0.96
TRIM56-203ENST00000467847 AACSQ86V21 672 aa21.04■□□□□ 0.96
TRIM56-203ENST00000467847 ERC1Q8IUD2 1116 aa21.04■□□□□ 0.96
TRIM56-203ENST00000467847 GPRC5AQ8NFJ5 357 aa21.04■□□□□ 0.96
TRIM56-203ENST00000467847 EXOC6BQ9Y2D4 811 aa21.04■□□□□ 0.96
TRIM56-203ENST00000467847 A0A1W2PPC1 479 aa21.03■□□□□ 0.96
TRIM56-203ENST00000467847 PEX10O60683 326 aa21.03■□□□□ 0.96
TRIM56-203ENST00000467847 GH2P01242 217 aa21.03■□□□□ 0.96
TRIM56-203ENST00000467847 MAP3K12Q12852 859 aa21.03■□□□□ 0.96
TRIM56-203ENST00000467847 MIER1Q8N108 512 aa21.03■□□□□ 0.96
TRIM56-203ENST00000467847 PAWRQ96IZ0 340 aaKnown RBP21.03■□□□□ 0.96
TRIM56-203ENST00000467847 PRO3102Q9H379 93 aa21.03■□□□□ 0.96
TRIM56-203ENST00000467847 TXNRD2Q9NNW7 524 aa21.03■□□□□ 0.96
TRIM56-203ENST00000467847 ALPK3Q96L96 1907 aa21.02■□□□□ 0.96
TRIM56-203ENST00000467847 A0A0C4DFX4 3053 aa21.02■□□□□ 0.96
TRIM56-203ENST00000467847 USP17L2Q6R6M4 530 aa21.02■□□□□ 0.96
TRIM56-203ENST00000467847 ANTXR1Q9H6X2 564 aa21.02■□□□□ 0.96
TRIM56-203ENST00000467847 HMX1Q9NP08 348 aaPredicted RBP21.02■□□□□ 0.96
TRIM56-203ENST00000467847 RPTORQ8N122 1335 aa21.02■□□□□ 0.95
TRIM56-203ENST00000467847 CYP2B6P20813 491 aa21.01■□□□□ 0.95
TRIM56-203ENST00000467847 TRIM32Q13049 653 aa21.01■□□□□ 0.95
TRIM56-203ENST00000467847 TMED8Q6PL24 325 aaPredicted RBP21.01■□□□□ 0.95
TRIM56-203ENST00000467847 NECAB2Q7Z6G3 386 aa21.01■□□□□ 0.95
TRIM56-203ENST00000467847 PANK1Q8TE04 598 aa21.01■□□□□ 0.95
TRIM56-203ENST00000467847 DIS3LQ8TF46 1054 aaKnown RBP21.01■□□□□ 0.95
TRIM56-203ENST00000467847 TRIB2Q92519 343 aa21.01■□□□□ 0.95
TRIM56-203ENST00000467847 EMILIN3Q9NT22 766 aa21.01■□□□□ 0.95
TRIM56-203ENST00000467847 RBPJLQ9UBG7 517 aa21.01■□□□□ 0.95
TRIM56-203ENST00000467847 SERPINB13Q9UIV8 391 aa21.01■□□□□ 0.95
TRIM56-203ENST00000467847 MAPK4P31152 587 aa21■□□□□ 0.95
TRIM56-203ENST00000467847 PDE3AQ14432 1141 aa21■□□□□ 0.95
TRIM56-203ENST00000467847 HSP90AB4PQ58FF6 505 aa21■□□□□ 0.95
TRIM56-203ENST00000467847 TATDN1Q6P1N9 297 aa21■□□□□ 0.95
TRIM56-203ENST00000467847 CCAR1Q8IX12 1150 aaKnown RBP21■□□□□ 0.95
TRIM56-203ENST00000467847 ANKLE1Q8NAG6 615 aa21■□□□□ 0.95
TRIM56-203ENST00000467847 GTF3C2Q8WUA4 911 aaPredicted RBP21■□□□□ 0.95
TRIM56-203ENST00000467847 SOCS4Q8WXH5 440 aa21■□□□□ 0.95
TRIM56-203ENST00000467847 FEZ1Q99689 392 aa21■□□□□ 0.95
TRIM56-203ENST00000467847 NUDT12Q9BQG2 462 aa21■□□□□ 0.95
TRIM56-203ENST00000467847 PAGR1Q9BTK6 254 aa21■□□□□ 0.95
TRIM56-203ENST00000467847 EHD4Q9H223 541 aa21■□□□□ 0.95
TRIM56-203ENST00000467847 ERVK-9P63128 1117 aa20.99■□□□□ 0.95
TRIM56-203ENST00000467847 ERVK-24P63145 666 aa20.99■□□□□ 0.95
TRIM56-203ENST00000467847 ZYXQ15942 572 aaKnown RBP20.99■□□□□ 0.95
TRIM56-203ENST00000467847 TTC6Q86TZ1 520 aa20.99■□□□□ 0.95
TRIM56-203ENST00000467847 IL1RAPL2Q9NP60 686 aa20.99■□□□□ 0.95
TRIM56-203ENST00000467847 NAV1Q8NEY1 1877 aa20.98■□□□□ 0.95
TRIM56-203ENST00000467847 DDX60LQ5H9U9 1706 aaKnown RBP20.98■□□□□ 0.95
TRIM56-203ENST00000467847 XRCC5P13010 732 aaKnown RBP20.98■□□□□ 0.95
TRIM56-203ENST00000467847 RAB3GAP1Q15042 981 aa20.98■□□□□ 0.95
TRIM56-203ENST00000467847 Q3C1V9 767 aa20.98■□□□□ 0.95
TRIM56-203ENST00000467847 CERKLQ49MI3 558 aaPredicted RBP20.98■□□□□ 0.95
TRIM56-203ENST00000467847 LRCH3Q96II8 777 aa20.98■□□□□ 0.95
TRIM56-203ENST00000467847 PORCNQ9H237 461 aa20.98■□□□□ 0.95
TRIM56-203ENST00000467847 ZBED9Q6R2W3 1325 aa20.98■□□□□ 0.95
TRIM56-203ENST00000467847 PRKAR2AP13861 404 aaKnown RBP20.97■□□□□ 0.95
TRIM56-203ENST00000467847 MNX1P50219 401 aaPredicted RBP20.97■□□□□ 0.95
TRIM56-203ENST00000467847 TTF1Q15361 905 aaPredicted RBP20.97■□□□□ 0.95
TRIM56-203ENST00000467847 ABCB5Q2M3G0 1257 aa20.97■□□□□ 0.95
TRIM56-203ENST00000467847 GPR142Q7Z601 462 aa20.97■□□□□ 0.95
TRIM56-203ENST00000467847 RHPN1Q8TCX5 695 aa20.97■□□□□ 0.95
TRIM56-203ENST00000467847 C12orf42Q96LP6 360 aa20.97■□□□□ 0.95
TRIM56-203ENST00000467847 RIOK1Q9BRS2 568 aaKnown RBP20.97■□□□□ 0.95
TRIM56-203ENST00000467847 STAP2Q9UGK3 403 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms