RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.49□□□□□ -1.37
SSR3-204ENST00000467733 MYOM2P54296 1465 aa6.48□□□□□ -1.37
SSR3-204ENST00000467733 SRPK2P78362 688 aaKnown RBP6.48□□□□□ -1.37
SSR3-204ENST00000467733 SOX4Q06945 474 aaPredicted RBP6.48□□□□□ -1.37
SSR3-204ENST00000467733 SNX29Q8TEQ0 813 aa6.48□□□□□ -1.37
SSR3-204ENST00000467733 SEPT3Q9UH03 358 aa6.48□□□□□ -1.37
SSR3-204ENST00000467733 GLI3P10071 1580 aa6.48□□□□□ -1.37
SSR3-204ENST00000467733 ADGRL2O95490 1459 aa6.47□□□□□ -1.37
SSR3-204ENST00000467733 BCL9LQ86UU0 1499 aa6.47□□□□□ -1.37
SSR3-204ENST00000467733 ANKRD30AQ9BXX3 1397 aa6.47□□□□□ -1.37
SSR3-204ENST00000467733 PHACTR2O75167 634 aa6.47□□□□□ -1.37
SSR3-204ENST00000467733 ESRRAP11474 423 aaPredicted RBP6.47□□□□□ -1.37
SSR3-204ENST00000467733 DRD2P14416 443 aa6.47□□□□□ -1.37
SSR3-204ENST00000467733 MAP7Q14244 749 aa6.47□□□□□ -1.37
SSR3-204ENST00000467733 DUSP27Q5VZP5 1158 aa6.47□□□□□ -1.37
SSR3-204ENST00000467733 ALKBH2Q6NS38 261 aa6.47□□□□□ -1.37
SSR3-204ENST00000467733 ASAP3Q8TDY4 903 aa6.47□□□□□ -1.37
SSR3-204ENST00000467733 GGNBP2Q9H3C7 697 aa6.47□□□□□ -1.37
SSR3-204ENST00000467733 AMOTL2Q9Y2J4 779 aa6.47□□□□□ -1.37
SSR3-204ENST00000467733 DLGAP3O95886 979 aa6.46□□□□□ -1.38
SSR3-204ENST00000467733 ADH5P11766 374 aa6.46□□□□□ -1.38
SSR3-204ENST00000467733 GSTM4Q03013 218 aa6.46□□□□□ -1.38
SSR3-204ENST00000467733 EHHADHQ08426 723 aa6.46□□□□□ -1.38
SSR3-204ENST00000467733 DDX17Q92841 729 aaKnown RBP6.46□□□□□ -1.38
SSR3-204ENST00000467733 ZFYVE1Q9HBF4 777 aa6.46□□□□□ -1.38
SSR3-204ENST00000467733 PAK6Q9NQU5 681 aaPredicted RBP6.46□□□□□ -1.38
SSR3-204ENST00000467733 C1orf167Q5SNV9 1468 aa6.46□□□□□ -1.38
SSR3-204ENST00000467733 VPS8Q8N3P4 1428 aa6.45□□□□□ -1.38
SSR3-204ENST00000467733 A6NHS1 94 aa6.45□□□□□ -1.38
SSR3-204ENST00000467733 FAM170BA6NMN3 283 aa6.45□□□□□ -1.38
SSR3-204ENST00000467733 EREGO14944 169 aa6.45□□□□□ -1.38
SSR3-204ENST00000467733 TNFRSF21O75509 655 aa6.45□□□□□ -1.38
SSR3-204ENST00000467733 ADMP35318 185 aa6.45□□□□□ -1.38
SSR3-204ENST00000467733 USP5P45974 858 aa6.45□□□□□ -1.38
SSR3-204ENST00000467733 EIF1AXP47813 144 aaKnown RBP6.45□□□□□ -1.38
SSR3-204ENST00000467733 SHISA5Q8N114 240 aa6.45□□□□□ -1.38
SSR3-204ENST00000467733 GATA6Q92908 595 aa6.45□□□□□ -1.38
SSR3-204ENST00000467733 C1orf115Q9H7X2 142 aa6.45□□□□□ -1.38
SSR3-204ENST00000467733 RALGAPBQ86X10 1494 aa6.45□□□□□ -1.38
SSR3-204ENST00000467733 RGPD1P0DJD0 1748 aa6.45□□□□□ -1.38
SSR3-204ENST00000467733 USP32Q8NFA0 1604 aa6.44□□□□□ -1.38
SSR3-204ENST00000467733 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.44□□□□□ -1.38
SSR3-204ENST00000467733 STK11IPQ8N1F8 1099 aa6.44□□□□□ -1.38
SSR3-204ENST00000467733 NRSN2Q9GZP1 204 aa6.44□□□□□ -1.38
SSR3-204ENST00000467733 ACTL7BQ9Y614 415 aa6.44□□□□□ -1.38
SSR3-204ENST00000467733 PLCH1Q4KWH8 1693 aa6.44□□□□□ -1.38
SSR3-204ENST00000467733 NWD2Q9ULI1 1742 aa6.44□□□□□ -1.38
SSR3-204ENST00000467733 PXDNQ92626 1479 aa6.43□□□□□ -1.38
SSR3-204ENST00000467733 ABCA3Q99758 1704 aa6.43□□□□□ -1.38
SSR3-204ENST00000467733 TNS1Q9HBL0 1735 aaKnown RBP6.43□□□□□ -1.38
SSR3-204ENST00000467733 BIN1O00499 593 aa6.43□□□□□ -1.38
SSR3-204ENST00000467733 CYP11A1P05108 521 aa6.43□□□□□ -1.38
SSR3-204ENST00000467733 COL19A1Q14993 1142 aa6.43□□□□□ -1.38
SSR3-204ENST00000467733 LRRC4CQ9HCJ2 640 aa6.43□□□□□ -1.38
SSR3-204ENST00000467733 ZC3H7BQ9UGR2 993 aaKnown RBP6.43□□□□□ -1.38
SSR3-204ENST00000467733 SLC5A6Q9Y289 635 aa6.43□□□□□ -1.38
SSR3-204ENST00000467733 SLIT2O94813 1529 aa6.43□□□□□ -1.38
SSR3-204ENST00000467733 CDC42BPGQ6DT37 1551 aa6.43□□□□□ -1.38
SSR3-204ENST00000467733 METP08581 1390 aa6.43□□□□□ -1.38
SSR3-204ENST00000467733 PRAG1Q86YV5 1406 aa6.42□□□□□ -1.38
SSR3-204ENST00000467733 ANKRD50Q9ULJ7 1429 aa6.42□□□□□ -1.38
SSR3-204ENST00000467733 PAPLNO95428 1278 aa6.42□□□□□ -1.38
SSR3-204ENST00000467733 RAB6AP20340 208 aa6.42□□□□□ -1.38
SSR3-204ENST00000467733 MPSTP25325 297 aa6.42□□□□□ -1.38
SSR3-204ENST00000467733 SF3B2Q13435 895 aaKnown RBP6.42□□□□□ -1.38
SSR3-204ENST00000467733 ZNF765Q7L2R6 523 aa6.42□□□□□ -1.38
SSR3-204ENST00000467733 DEFB132Q7Z7B7 95 aa6.42□□□□□ -1.38
SSR3-204ENST00000467733 ARID3AQ99856 593 aa6.42□□□□□ -1.38
SSR3-204ENST00000467733 SEMA6CQ9H3T2 930 aa6.42□□□□□ -1.38
SSR3-204ENST00000467733 POLIQ9UNA4 740 aa6.42□□□□□ -1.38
SSR3-204ENST00000467733 NEXMIFQ5QGS0 1516 aa6.41□□□□□ -1.38
SSR3-204ENST00000467733 NFICP08651 508 aa6.41□□□□□ -1.38
SSR3-204ENST00000467733 PLCL1Q15111 1095 aa6.41□□□□□ -1.38
SSR3-204ENST00000467733 PEAR1Q5VY43 1037 aaPredicted RBP6.41□□□□□ -1.38
SSR3-204ENST00000467733 DDX54Q8TDD1 881 aaKnown RBP6.41□□□□□ -1.38
SSR3-204ENST00000467733 MISP3Q96FF7 219 aa6.41□□□□□ -1.38
SSR3-204ENST00000467733 CLEC4MQ9H2X3 399 aaPredicted RBP6.41□□□□□ -1.38
SSR3-204ENST00000467733 ACSS3Q9H6R3 686 aa6.41□□□□□ -1.38
SSR3-204ENST00000467733 ADGRB2O60241 1585 aa6.4□□□□□ -1.38
SSR3-204ENST00000467733 KIF1AQ12756 1690 aa6.4□□□□□ -1.38
SSR3-204ENST00000467733 NRAPQ86VF7 1730 aa6.4□□□□□ -1.38
SSR3-204ENST00000467733 MAOBP27338 520 aa6.4□□□□□ -1.38
SSR3-204ENST00000467733 PCDH1Q08174 1060 aa6.4□□□□□ -1.38
SSR3-204ENST00000467733 POU4F3Q15319 338 aa6.4□□□□□ -1.38
SSR3-204ENST00000467733 BCL7CQ8WUZ0 217 aaPredicted RBP6.4□□□□□ -1.38
SSR3-204ENST00000467733 FOXD3Q9UJU5 478 aaPredicted RBP6.4□□□□□ -1.38
SSR3-204ENST00000467733 KIF1BO60333 1816 aa6.4□□□□□ -1.38
SSR3-204ENST00000467733 CEP350Q5VT06 3117 aa6.4□□□□□ -1.39
SSR3-204ENST00000467733 RREB1Q92766 1687 aa6.39□□□□□ -1.39
SSR3-204ENST00000467733 YY1P25490 414 aa6.39□□□□□ -1.39
SSR3-204ENST00000467733 AAMPQ13685 434 aa6.39□□□□□ -1.39
SSR3-204ENST00000467733 AKAP4Q5JQC9 854 aa6.39□□□□□ -1.39
SSR3-204ENST00000467733 DYMQ7RTS9 669 aa6.39□□□□□ -1.39
SSR3-204ENST00000467733 UNC5CLQ8IV45 518 aa6.39□□□□□ -1.39
SSR3-204ENST00000467733 GTF3C2Q8WUA4 911 aaPredicted RBP6.39□□□□□ -1.39
SSR3-204ENST00000467733 ORAI2Q96SN7 254 aa6.39□□□□□ -1.39
SSR3-204ENST00000467733 CORO1BQ9BR76 489 aa6.39□□□□□ -1.39
SSR3-204ENST00000467733 KRTAP4-9Q9BYQ8 210 aa6.39□□□□□ -1.39
SSR3-204ENST00000467733 LATS2Q9NRM7 1088 aa6.39□□□□□ -1.39
SSR3-204ENST00000467733 RAD18Q9NS91 495 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms