RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 HMGCS2P54868 508 aa21.89■■□□□ 1.09
CGREF1-208ENST00000467539 GABPAQ06546 454 aa21.89■■□□□ 1.09
CGREF1-208ENST00000467539 PABPC4Q13310 644 aaKnown RBP eCLIP21.89■■□□□ 1.09
CGREF1-208ENST00000467539 CERKLQ49MI3 558 aaPredicted RBP21.89■■□□□ 1.09
CGREF1-208ENST00000467539 TREML2Q5T2D2 321 aa21.89■■□□□ 1.09
CGREF1-208ENST00000467539 GCC1Q96CN9 775 aa21.89■■□□□ 1.09
CGREF1-208ENST00000467539 ARHGAP39Q9C0H5 1083 aa21.89■■□□□ 1.09
CGREF1-208ENST00000467539 TAOK2Q9UL54 1235 aa21.89■■□□□ 1.09
CGREF1-208ENST00000467539 USP17L10C9JJH3 530 aa21.88■■□□□ 1.09
CGREF1-208ENST00000467539 ERC2O15083 957 aa21.88■■□□□ 1.09
CGREF1-208ENST00000467539 PRKAB2O43741 272 aa21.88■■□□□ 1.09
CGREF1-208ENST00000467539 MBD4O95243 580 aa21.88■■□□□ 1.09
CGREF1-208ENST00000467539 GH2P01242 217 aa21.88■■□□□ 1.09
CGREF1-208ENST00000467539 PSMC4P43686 418 aa21.88■■□□□ 1.09
CGREF1-208ENST00000467539 PRMT2P55345 433 aa21.88■■□□□ 1.09
CGREF1-208ENST00000467539 SHROOM1Q2M3G4 852 aaPredicted RBP21.88■■□□□ 1.09
CGREF1-208ENST00000467539 ANKRD45Q5TZF3 282 aa21.88■■□□□ 1.09
CGREF1-208ENST00000467539 PUS7LQ9H0K6 701 aaKnown RBP21.88■■□□□ 1.09
CGREF1-208ENST00000467539 MYH1P12882 1939 aa21.87■■□□□ 1.09
CGREF1-208ENST00000467539 HOXD10P28358 340 aa21.87■■□□□ 1.09
CGREF1-208ENST00000467539 CTGFP29279 349 aa21.87■■□□□ 1.09
CGREF1-208ENST00000467539 SHMT1P34896 483 aa21.87■■□□□ 1.09
CGREF1-208ENST00000467539 MLLT1Q03111 559 aaPredicted RBP21.87■■□□□ 1.09
CGREF1-208ENST00000467539 TSHZ3Q63HK5 1081 aa21.87■■□□□ 1.09
CGREF1-208ENST00000467539 TRIM47Q96LD4 638 aa21.87■■□□□ 1.09
CGREF1-208ENST00000467539 PNMA3Q9UL41 463 aa21.87■■□□□ 1.09
CGREF1-208ENST00000467539 GLRX3O76003 335 aaKnown RBP21.86■■□□□ 1.09
CGREF1-208ENST00000467539 OSBPP22059 807 aa21.86■■□□□ 1.09
CGREF1-208ENST00000467539 HOXA7P31268 230 aaPredicted RBP21.86■■□□□ 1.09
CGREF1-208ENST00000467539 SOX10P56693 466 aa21.86■■□□□ 1.09
CGREF1-208ENST00000467539 MTMR2Q13614 643 aa21.86■■□□□ 1.09
CGREF1-208ENST00000467539 ABCB5Q2M3G0 1257 aa21.86■■□□□ 1.09
CGREF1-208ENST00000467539 PI4K2BQ8TCG2 481 aa21.86■■□□□ 1.09
CGREF1-208ENST00000467539 ARMC5Q96C12 935 aa21.86■■□□□ 1.09
CGREF1-208ENST00000467539 CABP5Q9NP86 173 aa21.86■■□□□ 1.09
CGREF1-208ENST00000467539 TMOD4Q9NZQ9 345 aa21.86■■□□□ 1.09
CGREF1-208ENST00000467539 ZBTB47Q9UFB7 747 aaPredicted RBP21.86■■□□□ 1.09
CGREF1-208ENST00000467539 RNF113AO15541 343 aaKnown RBP21.85■■□□□ 1.09
CGREF1-208ENST00000467539 FMNL1O95466 1100 aaPredicted RBP21.85■■□□□ 1.09
CGREF1-208ENST00000467539 ZFYP08048 801 aaPredicted RBP21.85■■□□□ 1.09
CGREF1-208ENST00000467539 NBPF11Q86T75 865 aa21.85■■□□□ 1.09
CGREF1-208ENST00000467539 OTUD7AQ8TE49 926 aaPredicted RBP21.85■■□□□ 1.09
CGREF1-208ENST00000467539 SMCR8Q8TEV9 937 aaPredicted RBP21.85■■□□□ 1.09
CGREF1-208ENST00000467539 STRBPQ96SI9 672 aaKnown RBP21.85■■□□□ 1.09
CGREF1-208ENST00000467539 SRRDQ9UH36 339 aa21.85■■□□□ 1.09
CGREF1-208ENST00000467539 PTCH2Q9Y6C5 1203 aa21.85■■□□□ 1.09
CGREF1-208ENST00000467539 GCLCP48506 637 aaPredicted RBP21.84■■□□□ 1.09
CGREF1-208ENST00000467539 LRRFIP1Q32MZ4 808 aaKnown RBP21.84■■□□□ 1.09
CGREF1-208ENST00000467539 C12orf60Q5U649 245 aa21.84■■□□□ 1.09
CGREF1-208ENST00000467539 ASCC2Q9H1I8 757 aaPredicted RBP21.84■■□□□ 1.09
CGREF1-208ENST00000467539 RWDD1Q9H446 243 aaPredicted RBP21.84■■□□□ 1.09
CGREF1-208ENST00000467539 SWAP70Q9UH65 585 aa21.84■■□□□ 1.09
CGREF1-208ENST00000467539 SLC4A4Q9Y6R1 1079 aa21.84■■□□□ 1.09
CGREF1-208ENST00000467539 PTPRFP10586 1907 aa21.84■■□□□ 1.09
CGREF1-208ENST00000467539 USP17L12C9JPN9 530 aa21.83■■□□□ 1.09
CGREF1-208ENST00000467539 USP17L21D6R901 530 aa21.83■■□□□ 1.09
CGREF1-208ENST00000467539 CYP2D6P10635 497 aa21.83■■□□□ 1.09
CGREF1-208ENST00000467539 MX1P20591 662 aa21.83■■□□□ 1.09
CGREF1-208ENST00000467539 EVX2Q03828 476 aa21.83■■□□□ 1.09
CGREF1-208ENST00000467539 USP17L2Q6R6M4 530 aa21.83■■□□□ 1.09
CGREF1-208ENST00000467539 APPBP2Q92624 585 aa21.83■■□□□ 1.09
CGREF1-208ENST00000467539 OSBP2Q969R2 916 aa21.83■■□□□ 1.09
CGREF1-208ENST00000467539 DDRGK1Q96HY6 314 aa21.83■■□□□ 1.09
CGREF1-208ENST00000467539 EMILIN3Q9NT22 766 aa21.83■■□□□ 1.09
CGREF1-208ENST00000467539 ATAD5Q96QE3 1844 aa21.83■■□□□ 1.08
CGREF1-208ENST00000467539 SALL3Q9BXA9 1300 aa21.82■■□□□ 1.08
CGREF1-208ENST00000467539 FCGRTP55899 365 aa21.82■■□□□ 1.08
CGREF1-208ENST00000467539 RAB3GAP1Q15042 981 aa21.82■■□□□ 1.08
CGREF1-208ENST00000467539 STAP2Q9UGK3 403 aa21.82■■□□□ 1.08
CGREF1-208ENST00000467539 SUPT16HQ9Y5B9 1047 aaKnown RBP21.82■■□□□ 1.08
CGREF1-208ENST00000467539 ECM2O94769 699 aaPredicted RBP21.81■■□□□ 1.08
CGREF1-208ENST00000467539 GUCY1A2P33402 732 aa21.81■■□□□ 1.08
CGREF1-208ENST00000467539 SLC9C1Q4G0N8 1177 aa21.81■■□□□ 1.08
CGREF1-208ENST00000467539 GIMAP6Q6P9H5 292 aa21.81■■□□□ 1.08
CGREF1-208ENST00000467539 CTR9Q6PD62 1173 aa21.81■■□□□ 1.08
CGREF1-208ENST00000467539 AMOTL1Q8IY63 956 aa21.81■■□□□ 1.08
CGREF1-208ENST00000467539 ANKRD13CQ8N6S4 541 aa21.81■■□□□ 1.08
CGREF1-208ENST00000467539 EXOC6Q8TAG9 804 aa21.81■■□□□ 1.08
CGREF1-208ENST00000467539 DYNLL2Q96FJ2 89 aa21.81■■□□□ 1.08
CGREF1-208ENST00000467539 P2RX7Q99572 595 aaKnown RBP21.81■■□□□ 1.08
CGREF1-208ENST00000467539 KIAA1683Q9H0B3 1180 aa21.81■■□□□ 1.08
CGREF1-208ENST00000467539 GSG1L2A8MUP6 293 aa21.8■■□□□ 1.08
CGREF1-208ENST00000467539 USP14P54578 494 aa21.8■■□□□ 1.08
CGREF1-208ENST00000467539 FAM110CQ1W6H9 321 aa21.8■■□□□ 1.08
CGREF1-208ENST00000467539 ZNF333Q96JL9 665 aa21.8■■□□□ 1.08
CGREF1-208ENST00000467539 C12orf42Q96LP6 360 aa21.8■■□□□ 1.08
CGREF1-208ENST00000467539 HTTP42858 3142 aa21.8■■□□□ 1.08
CGREF1-208ENST00000467539 CDK8P49336 464 aa21.79■■□□□ 1.08
CGREF1-208ENST00000467539 IRX3P78415 501 aaPredicted RBP21.79■■□□□ 1.08
CGREF1-208ENST00000467539 SEPT2Q15019 361 aa21.79■■□□□ 1.08
CGREF1-208ENST00000467539 SBK1Q52WX2 424 aa21.79■■□□□ 1.08
CGREF1-208ENST00000467539 SMC5Q8IY18 1101 aa21.79■■□□□ 1.08
CGREF1-208ENST00000467539 ACER1Q8TDN7 264 aa21.79■■□□□ 1.08
CGREF1-208ENST00000467539 CCDC17Q96LX7 622 aa21.79■■□□□ 1.08
CGREF1-208ENST00000467539 CYP2D7A0A087X1C5 515 aa21.78■■□□□ 1.08
CGREF1-208ENST00000467539 GNAT2P19087 354 aa21.78■■□□□ 1.08
CGREF1-208ENST00000467539 PDE1AP54750 535 aa21.78■■□□□ 1.08
CGREF1-208ENST00000467539 C16orf86Q6ZW13 317 aa21.78■■□□□ 1.08
CGREF1-208ENST00000467539 SLC44A5Q8NCS7 719 aa21.78■■□□□ 1.08
CGREF1-208ENST00000467539 RAET1EQ8TD07 263 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms