RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 BACH2Q9BYV9 841 aa6.39□□□□□ -1.39
VPS50-209ENST00000467326 FOXQ1Q9C009 403 aa6.39□□□□□ -1.39
VPS50-209ENST00000467326 BSDC1Q9NW68 430 aaPredicted RBP6.39□□□□□ -1.39
VPS50-209ENST00000467326 ZC3H7BQ9UGR2 993 aaKnown RBP6.39□□□□□ -1.39
VPS50-209ENST00000467326 GARTP22102 1010 aa6.38□□□□□ -1.39
VPS50-209ENST00000467326 FANCCQ00597 558 aa6.38□□□□□ -1.39
VPS50-209ENST00000467326 FAM196AQ6ZSG2 479 aa6.38□□□□□ -1.39
VPS50-209ENST00000467326 RGS22Q8NE09 1264 aa6.38□□□□□ -1.39
VPS50-209ENST00000467326 GTF2IRD1Q9UHL9 959 aa6.38□□□□□ -1.39
VPS50-209ENST00000467326 ADAM30Q9UKF2 790 aa6.38□□□□□ -1.39
VPS50-209ENST00000467326 U3KQE9 123 aa6.38□□□□□ -1.39
VPS50-209ENST00000467326 SLITRK5O94991 958 aa6.37□□□□□ -1.39
VPS50-209ENST00000467326 CST3P01034 146 aaPredicted RBP6.37□□□□□ -1.39
VPS50-209ENST00000467326 PRNPP04156 253 aa6.37□□□□□ -1.39
VPS50-209ENST00000467326 CEACAM5P06731 702 aa6.37□□□□□ -1.39
VPS50-209ENST00000467326 ITIH2P19823 946 aa6.37□□□□□ -1.39
VPS50-209ENST00000467326 VAMP1P23763 118 aa6.37□□□□□ -1.39
VPS50-209ENST00000467326 EIF4A3P38919 411 aaKnown RBP6.37□□□□□ -1.39
VPS50-209ENST00000467326 MPP2Q14168 576 aa6.37□□□□□ -1.39
VPS50-209ENST00000467326 OGFOD2Q6N063 350 aa6.37□□□□□ -1.39
VPS50-209ENST00000467326 MRPL41Q8IXM3 137 aaKnown RBP6.37□□□□□ -1.39
VPS50-209ENST00000467326 PLD6Q8N2A8 252 aaKnown RBP6.37□□□□□ -1.39
VPS50-209ENST00000467326 POU5F2Q8N7G0 328 aa6.37□□□□□ -1.39
VPS50-209ENST00000467326 MFSD2AQ8NA29 543 aa6.37□□□□□ -1.39
VPS50-209ENST00000467326 FBXO27Q8NI29 283 aa6.37□□□□□ -1.39
VPS50-209ENST00000467326 NETO1Q8TDF5 533 aa6.37□□□□□ -1.39
VPS50-209ENST00000467326 TMEM87BQ96K49 555 aa6.37□□□□□ -1.39
VPS50-209ENST00000467326 DPH2Q9BQC3 489 aaPredicted RBP6.37□□□□□ -1.39
VPS50-209ENST00000467326 MKNK2Q9HBH9 465 aa6.37□□□□□ -1.39
VPS50-209ENST00000467326 PRDM5Q9NQX1 630 aaPredicted RBP6.37□□□□□ -1.39
VPS50-209ENST00000467326 KCNQ5Q9NR82 932 aa6.37□□□□□ -1.39
VPS50-209ENST00000467326 METTL5Q9NRN9 209 aaKnown RBP6.37□□□□□ -1.39
VPS50-209ENST00000467326 TJP2Q9UDY2 1190 aa6.37□□□□□ -1.39
VPS50-209ENST00000467326 SUPT16HQ9Y5B9 1047 aaKnown RBP6.37□□□□□ -1.39
VPS50-209ENST00000467326 CORINQ9Y5Q5 1042 aa6.37□□□□□ -1.39
VPS50-209ENST00000467326 ADAMTS4O75173 837 aa6.36□□□□□ -1.39
VPS50-209ENST00000467326 JUNBP17275 347 aaPredicted RBP6.36□□□□□ -1.39
VPS50-209ENST00000467326 PLCG1P19174 1290 aa6.36□□□□□ -1.39
VPS50-209ENST00000467326 IFI16Q16666 785 aaKnown RBP6.36□□□□□ -1.39
VPS50-209ENST00000467326 ZNF746Q6NUN9 644 aaPredicted RBP6.36□□□□□ -1.39
VPS50-209ENST00000467326 LETMD1Q6P1Q0 360 aa6.36□□□□□ -1.39
VPS50-209ENST00000467326 REC114Q7Z4M0 266 aa6.36□□□□□ -1.39
VPS50-209ENST00000467326 XAGE3Q8WTP9 111 aa6.36□□□□□ -1.39
VPS50-209ENST00000467326 ACSF2Q96CM8 615 aaPredicted RBP6.36□□□□□ -1.39
VPS50-209ENST00000467326 FBXL18Q96ME1 805 aa6.36□□□□□ -1.39
VPS50-209ENST00000467326 HEXIM2Q96MH2 286 aaKnown RBP6.36□□□□□ -1.39
VPS50-209ENST00000467326 LRRC3Q9BY71 257 aa6.36□□□□□ -1.39
VPS50-209ENST00000467326 KRTAP4-11Q9BYQ6 195 aa6.36□□□□□ -1.39
VPS50-209ENST00000467326 CCDC39Q9UFE4 941 aa6.36□□□□□ -1.39
VPS50-209ENST00000467326 TPX2Q9ULW0 747 aaKnown RBP6.36□□□□□ -1.39
VPS50-209ENST00000467326 MAPK8IP1Q9UQF2 711 aa6.36□□□□□ -1.39
VPS50-209ENST00000467326 GNAT3A8MTJ3 354 aa6.35□□□□□ -1.39
VPS50-209ENST00000467326 IGF2BP3O00425 579 aaKnown RBP eCLIP6.35□□□□□ -1.39
VPS50-209ENST00000467326 TLR3O15455 904 aaKnown RBP6.35□□□□□ -1.39
VPS50-209ENST00000467326 GRIN3BO60391 1043 aa6.35□□□□□ -1.39
VPS50-209ENST00000467326 EOMESO95936 686 aa6.35□□□□□ -1.39
VPS50-209ENST00000467326 OXCT1P55809 520 aa6.35□□□□□ -1.39
VPS50-209ENST00000467326 CWF19L2Q2TBE0 894 aaKnown RBP6.35□□□□□ -1.39
VPS50-209ENST00000467326 SLC6A19Q695T7 634 aa6.35□□□□□ -1.39
VPS50-209ENST00000467326 FBXL19Q6PCT2 694 aa6.35□□□□□ -1.39
VPS50-209ENST00000467326 STK11IPQ8N1F8 1099 aa6.35□□□□□ -1.39
VPS50-209ENST00000467326 FLCNQ8NFG4 579 aa6.35□□□□□ -1.39
VPS50-209ENST00000467326 MRRFQ96E11 262 aaKnown RBP6.35□□□□□ -1.39
VPS50-209ENST00000467326 ADAMTS1Q9UHI8 967 aa6.35□□□□□ -1.39
VPS50-209ENST00000467326 POLR3KQ9Y2Y1 108 aaPredicted RBP6.35□□□□□ -1.39
VPS50-209ENST00000467326 SCAMP3O14828 347 aaKnown RBP6.34□□□□□ -1.39
VPS50-209ENST00000467326 HTR3BO95264 441 aa6.34□□□□□ -1.39
VPS50-209ENST00000467326 C8AP07357 584 aa6.34□□□□□ -1.39
VPS50-209ENST00000467326 RANGAP1P46060 587 aaPredicted RBP6.34□□□□□ -1.39
VPS50-209ENST00000467326 TMEM201Q5SNT2 666 aa6.34□□□□□ -1.39
VPS50-209ENST00000467326 FAM214BQ7L5A3 538 aa6.34□□□□□ -1.39
VPS50-209ENST00000467326 USP48Q86UV5 1035 aa6.34□□□□□ -1.39
VPS50-209ENST00000467326 KIAA0825Q8IV33 1275 aa6.34□□□□□ -1.39
VPS50-209ENST00000467326 MCATQ8IVS2 390 aaKnown RBP6.34□□□□□ -1.39
VPS50-209ENST00000467326 FAM13CQ8NE31 585 aa6.34□□□□□ -1.39
VPS50-209ENST00000467326 ZNF296Q8WUU4 475 aaPredicted RBP6.34□□□□□ -1.39
VPS50-209ENST00000467326 MISP3Q96FF7 219 aa6.34□□□□□ -1.39
VPS50-209ENST00000467326 REV1Q9UBZ9 1251 aa6.34□□□□□ -1.39
VPS50-209ENST00000467326 KLHL3Q9UH77 587 aa6.34□□□□□ -1.39
VPS50-209ENST00000467326 ROBO2Q9HCK4 1378 aa6.33□□□□□ -1.4
VPS50-209ENST00000467326 PRR36Q9H6K5 1346 aa6.33□□□□□ -1.4
VPS50-209ENST00000467326 GREM1O60565 184 aa6.33□□□□□ -1.4
VPS50-209ENST00000467326 CRKP46108 304 aa6.33□□□□□ -1.4
VPS50-209ENST00000467326 YARSP54577 528 aaKnown RBP6.33□□□□□ -1.4
VPS50-209ENST00000467326 APOBRQ0VD83 1088 aa6.33□□□□□ -1.4
VPS50-209ENST00000467326 ZNF394Q53GI3 561 aa6.33□□□□□ -1.4
VPS50-209ENST00000467326 SFRP5Q5T4F7 317 aa6.33□□□□□ -1.4
VPS50-209ENST00000467326 NFXL1Q6ZNB6 911 aa6.33□□□□□ -1.4
VPS50-209ENST00000467326 ABI1Q8IZP0 508 aa6.33□□□□□ -1.4
VPS50-209ENST00000467326 RNF34Q969K3 372 aa6.33□□□□□ -1.4
VPS50-209ENST00000467326 SLC5A6Q9Y289 635 aa6.33□□□□□ -1.4
VPS50-209ENST00000467326 PCDHGB7Q9Y5F8 929 aa6.33□□□□□ -1.4
VPS50-209ENST00000467326 TMEM265A0A087WTH1 108 aa6.32□□□□□ -1.4
VPS50-209ENST00000467326 UNCXA6NJT0 531 aa6.32□□□□□ -1.4
VPS50-209ENST00000467326 C22orf34Q6ZV56 151 aa6.32□□□□□ -1.4
VPS50-209ENST00000467326 SPACA3Q8IXA5 215 aa6.32□□□□□ -1.4
VPS50-209ENST00000467326 MFSD4AQ8N468 514 aa6.32□□□□□ -1.4
VPS50-209ENST00000467326 CYB5D2Q8WUJ1 264 aa6.32□□□□□ -1.4
VPS50-209ENST00000467326 BCL7CQ8WUZ0 217 aaPredicted RBP6.32□□□□□ -1.4
VPS50-209ENST00000467326 HRASLS5Q96KN8 279 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms