RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 MANSC4A6NHS7 340 aaPredicted RBP13.22□□□□□ -0.29
MSH5-212ENST00000467319 IRF6O14896 467 aa13.22□□□□□ -0.29
MSH5-212ENST00000467319 CHMLP26374 656 aa13.22□□□□□ -0.29
MSH5-212ENST00000467319 TM4SF4P48230 202 aa13.22□□□□□ -0.29
MSH5-212ENST00000467319 TDO2P48775 406 aa13.22□□□□□ -0.29
MSH5-212ENST00000467319 SREBF2Q12772 1141 aa13.22□□□□□ -0.29
MSH5-212ENST00000467319 MKRN3Q13064 507 aaKnown RBP13.22□□□□□ -0.29
MSH5-212ENST00000467319 ALX1Q15699 326 aa13.22□□□□□ -0.29
MSH5-212ENST00000467319 TRIM34Q9BYJ4 488 aa13.22□□□□□ -0.29
MSH5-212ENST00000467319 PICK1Q9NRD5 415 aa13.22□□□□□ -0.29
MSH5-212ENST00000467319 ASNSP08243 561 aa13.21□□□□□ -0.29
MSH5-212ENST00000467319 HSPA1AP0DMV8 641 aaKnown RBP13.21□□□□□ -0.29
MSH5-212ENST00000467319 HSPA1BP0DMV9 641 aaKnown RBP13.21□□□□□ -0.29
MSH5-212ENST00000467319 MOGSQ13724 837 aa13.21□□□□□ -0.29
MSH5-212ENST00000467319 CWC27Q6UX04 472 aaKnown RBP13.21□□□□□ -0.29
MSH5-212ENST00000467319 CCDC84Q86UT8 332 aaPredicted RBP13.21□□□□□ -0.29
MSH5-212ENST00000467319 AMOTL1Q8IY63 956 aa13.21□□□□□ -0.29
MSH5-212ENST00000467319 BRI3BPQ8WY22 251 aa13.21□□□□□ -0.29
MSH5-212ENST00000467319 DYNLL2Q96FJ2 89 aa13.21□□□□□ -0.29
MSH5-212ENST00000467319 TBC1D2Q9BYX2 928 aa13.21□□□□□ -0.29
MSH5-212ENST00000467319 NACAP1Q9BZK3 213 aa13.21□□□□□ -0.29
MSH5-212ENST00000467319 SAGE1Q9NXZ1 904 aa13.21□□□□□ -0.29
MSH5-212ENST00000467319 AFG3L2Q9Y4W6 797 aa13.21□□□□□ -0.29
MSH5-212ENST00000467319 A0A0G2JLL6 359 aaPredicted RBP13.2□□□□□ -0.3
MSH5-212ENST00000467319 IGF2BP3O00425 579 aaKnown RBP eCLIP13.2□□□□□ -0.3
MSH5-212ENST00000467319 CA12O43570 354 aa13.2□□□□□ -0.3
MSH5-212ENST00000467319 GDF11O95390 407 aa13.2□□□□□ -0.3
MSH5-212ENST00000467319 HSPD1P10809 573 aaKnown RBP13.2□□□□□ -0.3
MSH5-212ENST00000467319 GTF2A2P52657 109 aa13.2□□□□□ -0.3
MSH5-212ENST00000467319 MFAP1P55081 439 aaKnown RBP13.2□□□□□ -0.3
MSH5-212ENST00000467319 SNAPC2Q13487 334 aa13.2□□□□□ -0.3
MSH5-212ENST00000467319 PRRT2Q7Z6L0 340 aaPredicted RBP13.2□□□□□ -0.3
MSH5-212ENST00000467319 CFHR5Q9BXR6 569 aa13.2□□□□□ -0.3
MSH5-212ENST00000467319 NAPBQ9H115 298 aa13.2□□□□□ -0.3
MSH5-212ENST00000467319 ZHX2Q9Y6X8 837 aa13.2□□□□□ -0.3
MSH5-212ENST00000467319 PLIN4Q96Q06 1357 aa13.2□□□□□ -0.3
MSH5-212ENST00000467319 CCL15-CCL14A0A0B4J2E2 113 aa13.19□□□□□ -0.3
MSH5-212ENST00000467319 CXCL11O14625 94 aa13.19□□□□□ -0.3
MSH5-212ENST00000467319 SGSM2O43147 1006 aa13.19□□□□□ -0.3
MSH5-212ENST00000467319 GH2P01242 217 aa13.19□□□□□ -0.3
MSH5-212ENST00000467319 APPP05067 770 aa13.19□□□□□ -0.3
MSH5-212ENST00000467319 GUCY1A2P33402 732 aa13.19□□□□□ -0.3
MSH5-212ENST00000467319 CDK8P49336 464 aa13.19□□□□□ -0.3
MSH5-212ENST00000467319 INHBEP58166 350 aa13.19□□□□□ -0.3
MSH5-212ENST00000467319 PPARAQ07869 468 aa13.19□□□□□ -0.3
MSH5-212ENST00000467319 CCL15Q16663 113 aa13.19□□□□□ -0.3
MSH5-212ENST00000467319 CERKLQ49MI3 558 aaPredicted RBP13.19□□□□□ -0.3
MSH5-212ENST00000467319 IFNL1Q8IU54 200 aa13.19□□□□□ -0.3
MSH5-212ENST00000467319 PTPN18Q99952 460 aa13.19□□□□□ -0.3
MSH5-212ENST00000467319 WDR18Q9BV38 432 aa13.19□□□□□ -0.3
MSH5-212ENST00000467319 DSCC1Q9BVC3 393 aa13.19□□□□□ -0.3
MSH5-212ENST00000467319 ANAPC4Q9UJX5 808 aa13.19□□□□□ -0.3
MSH5-212ENST00000467319 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.19□□□□□ -0.3
MSH5-212ENST00000467319 USP17L5A8MUK1 530 aa13.18□□□□□ -0.3
MSH5-212ENST00000467319 FOXN1O15353 648 aa13.18□□□□□ -0.3
MSH5-212ENST00000467319 FGAP02671 866 aa13.18□□□□□ -0.3
MSH5-212ENST00000467319 CETPP11597 493 aa13.18□□□□□ -0.3
MSH5-212ENST00000467319 RASA1P20936 1047 aa13.18□□□□□ -0.3
MSH5-212ENST00000467319 ABCB5Q2M3G0 1257 aa13.18□□□□□ -0.3
MSH5-212ENST00000467319 ZNF280CQ8ND82 737 aa13.18□□□□□ -0.3
MSH5-212ENST00000467319 NBPF3Q9H094 633 aa13.18□□□□□ -0.3
MSH5-212ENST00000467319 ZCCHC17Q9NP64 241 aaKnown RBP13.18□□□□□ -0.3
MSH5-212ENST00000467319 RNF186Q9NXI6 227 aa13.18□□□□□ -0.3
MSH5-212ENST00000467319 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.18□□□□□ -0.3
MSH5-212ENST00000467319 TRIM75PA6NK02 468 aa13.17□□□□□ -0.3
MSH5-212ENST00000467319 MINDY4BA8MYZ0 360 aa13.17□□□□□ -0.3
MSH5-212ENST00000467319 FGRP09769 529 aa13.17□□□□□ -0.3
MSH5-212ENST00000467319 AKR1B1P15121 316 aa13.17□□□□□ -0.3
MSH5-212ENST00000467319 TMEM179Q6ZVK1 233 aa13.17□□□□□ -0.3
MSH5-212ENST00000467319 FAM43AQ8N2R8 423 aa13.17□□□□□ -0.3
MSH5-212ENST00000467319 RUFY2Q8WXA3 655 aa13.17□□□□□ -0.3
MSH5-212ENST00000467319 CCDC17Q96LX7 622 aa13.17□□□□□ -0.3
MSH5-212ENST00000467319 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.17□□□□□ -0.3
MSH5-212ENST00000467319 BTBD19C9JJ37 291 aa13.16□□□□□ -0.3
MSH5-212ENST00000467319 HSPA8P11142 646 aaKnown RBP13.16□□□□□ -0.3
MSH5-212ENST00000467319 SPP2Q13103 211 aa13.16□□□□□ -0.3
MSH5-212ENST00000467319 SEPT2Q15019 361 aa13.16□□□□□ -0.3
MSH5-212ENST00000467319 SH3D19Q5HYK7 790 aa13.16□□□□□ -0.3
MSH5-212ENST00000467319 GPAT2Q6NUI2 795 aa13.16□□□□□ -0.3
MSH5-212ENST00000467319 ANKRD23Q86SG2 305 aa13.16□□□□□ -0.3
MSH5-212ENST00000467319 TBC1D10CQ8IV04 446 aa13.16□□□□□ -0.3
MSH5-212ENST00000467319 AS3MTQ9HBK9 375 aa13.16□□□□□ -0.3
MSH5-212ENST00000467319 TACC3Q9Y6A5 838 aa13.16□□□□□ -0.3
MSH5-212ENST00000467319 ADGRA2Q96PE1 1338 aa13.15□□□□□ -0.3
MSH5-212ENST00000467319 IGKV6D-41A0A0C4DH26 115 aa13.15□□□□□ -0.3
MSH5-212ENST00000467319 ORC4O43929 436 aa13.15□□□□□ -0.3
MSH5-212ENST00000467319 CDC45O75419 566 aa13.15□□□□□ -0.3
MSH5-212ENST00000467319 ALDH1A1P00352 501 aa13.15□□□□□ -0.3
MSH5-212ENST00000467319 BACE1P56817 501 aa13.15□□□□□ -0.3
MSH5-212ENST00000467319 MTMR2Q13614 643 aa13.15□□□□□ -0.3
MSH5-212ENST00000467319 NOM1Q5C9Z4 860 aaKnown RBP13.15□□□□□ -0.3
MSH5-212ENST00000467319 CLEC10AQ8IUN9 316 aa13.15□□□□□ -0.3
MSH5-212ENST00000467319 PROCA1Q8NCQ7 364 aaPredicted RBP13.15□□□□□ -0.3
MSH5-212ENST00000467319 C12orf42Q96LP6 360 aa13.15□□□□□ -0.3
MSH5-212ENST00000467319 ESYT1Q9BSJ8 1104 aa13.15□□□□□ -0.3
MSH5-212ENST00000467319 BEGAINQ9BUH8 593 aa13.15□□□□□ -0.3
MSH5-212ENST00000467319 KIAA1683Q9H0B3 1180 aa13.15□□□□□ -0.3
MSH5-212ENST00000467319 SLC3A2P08195 630 aaKnown RBP13.14□□□□□ -0.31
MSH5-212ENST00000467319 PCP11498 1178 aaKnown RBP13.14□□□□□ -0.31
MSH5-212ENST00000467319 CTCFP49711 727 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms