RNA–Protein interactions for RNA: ENST00000467288.6

GMDS-203, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-203ENST00000467288 ZSCAN25Q6NSZ9 544 aa23.47■■□□□ 1.35
GMDS-203ENST00000467288 SDR42E1Q8WUS8 393 aa23.47■■□□□ 1.35
GMDS-203ENST00000467288 DCP1AQ9NPI6 582 aaPredicted RBP23.47■■□□□ 1.35
GMDS-203ENST00000467288 ZBTB21Q9ULJ3 1066 aa23.47■■□□□ 1.35
GMDS-203ENST00000467288 MBD4O95243 580 aa23.46■■□□□ 1.35
GMDS-203ENST00000467288 BCRP11274 1271 aa23.46■■□□□ 1.35
GMDS-203ENST00000467288 KIF22Q14807 665 aa23.46■■□□□ 1.35
GMDS-203ENST00000467288 TSHZ3Q63HK5 1081 aa23.46■■□□□ 1.35
GMDS-203ENST00000467288 TTC41PQ6P2S7 1318 aa23.46■■□□□ 1.35
GMDS-203ENST00000467288 KBTBD3Q8NAB2 608 aa23.46■■□□□ 1.35
GMDS-203ENST00000467288 NAV1Q8NEY1 1877 aa23.46■■□□□ 1.35
GMDS-203ENST00000467288 ARHGAP39Q9C0H5 1083 aa23.46■■□□□ 1.35
GMDS-203ENST00000467288 PCDH10Q9P2E7 1040 aa23.46■■□□□ 1.35
GMDS-203ENST00000467288 MYH7P12883 1935 aa23.45■■□□□ 1.35
GMDS-203ENST00000467288 LOC285556D6RIA3 1793 aa23.45■■□□□ 1.34
GMDS-203ENST00000467288 POLR3DP05423 398 aaPredicted RBP23.45■■□□□ 1.34
GMDS-203ENST00000467288 GABPAQ06546 454 aa23.45■■□□□ 1.34
GMDS-203ENST00000467288 TREML2Q5T2D2 321 aa23.45■■□□□ 1.34
GMDS-203ENST00000467288 MCM9Q9NXL9 1143 aa23.45■■□□□ 1.34
GMDS-203ENST00000467288 CENPFP49454 3210 aa23.44■■□□□ 1.34
GMDS-203ENST00000467288 PRKAB2O43741 272 aa23.44■■□□□ 1.34
GMDS-203ENST00000467288 GNRH1P01148 92 aa23.44■■□□□ 1.34
GMDS-203ENST00000467288 EN2P19622 333 aaPredicted RBP23.44■■□□□ 1.34
GMDS-203ENST00000467288 HMGCS2P54868 508 aa23.44■■□□□ 1.34
GMDS-203ENST00000467288 BACE1P56817 501 aa23.44■■□□□ 1.34
GMDS-203ENST00000467288 OTUD7AQ8TE49 926 aaPredicted RBP23.44■■□□□ 1.34
GMDS-203ENST00000467288 CTGFP29279 349 aa23.43■■□□□ 1.34
GMDS-203ENST00000467288 SHMT1P34896 483 aa23.43■■□□□ 1.34
GMDS-203ENST00000467288 PI4K2BQ8TCG2 481 aa23.43■■□□□ 1.34
GMDS-203ENST00000467288 GCC1Q96CN9 775 aa23.43■■□□□ 1.34
GMDS-203ENST00000467288 PUS7LQ9H0K6 701 aaKnown RBP23.43■■□□□ 1.34
GMDS-203ENST00000467288 ATP8A2Q9NTI2 1148 aa23.43■■□□□ 1.34
GMDS-203ENST00000467288 PTCH2Q9Y6C5 1203 aa23.43■■□□□ 1.34
GMDS-203ENST00000467288 ZSWIM8A7E2V4 1837 aa23.43■■□□□ 1.34
GMDS-203ENST00000467288 SALL3Q9BXA9 1300 aa23.42■■□□□ 1.34
GMDS-203ENST00000467288 C19orf81C9J6K1 198 aa23.42■■□□□ 1.34
GMDS-203ENST00000467288 GH2P01242 217 aa23.42■■□□□ 1.34
GMDS-203ENST00000467288 MTMR2Q13614 643 aa23.42■■□□□ 1.34
GMDS-203ENST00000467288 CERKLQ49MI3 558 aaPredicted RBP23.42■■□□□ 1.34
GMDS-203ENST00000467288 ZNF333Q96JL9 665 aa23.42■■□□□ 1.34
GMDS-203ENST00000467288 PNMA3Q9UL41 463 aa23.42■■□□□ 1.34
GMDS-203ENST00000467288 MKI67P46013 3256 aaKnown RBP23.42■■□□□ 1.34
GMDS-203ENST00000467288 ERC2O15083 957 aa23.41■■□□□ 1.34
GMDS-203ENST00000467288 GLRX3O76003 335 aaKnown RBP23.41■■□□□ 1.34
GMDS-203ENST00000467288 PSMC4P43686 418 aa23.41■■□□□ 1.34
GMDS-203ENST00000467288 EVX2Q03828 476 aa23.41■■□□□ 1.34
GMDS-203ENST00000467288 PABPC4Q13310 644 aaKnown RBP eCLIP23.41■■□□□ 1.34
GMDS-203ENST00000467288 TMEM106CQ9BVX2 250 aa23.41■■□□□ 1.34
GMDS-203ENST00000467288 TAOK2Q9UL54 1235 aa23.41■■□□□ 1.34
GMDS-203ENST00000467288 USP17L10C9JJH3 530 aa23.4■■□□□ 1.34
GMDS-203ENST00000467288 CYP2D6P10635 497 aa23.4■■□□□ 1.34
GMDS-203ENST00000467288 PRMT2P55345 433 aa23.4■■□□□ 1.34
GMDS-203ENST00000467288 ABCB5Q2M3G0 1257 aa23.4■■□□□ 1.34
GMDS-203ENST00000467288 SLC9C1Q4G0N8 1177 aa23.4■■□□□ 1.34
GMDS-203ENST00000467288 ANKRD45Q5TZF3 282 aa23.4■■□□□ 1.34
GMDS-203ENST00000467288 NBPF11Q86T75 865 aa23.4■■□□□ 1.34
GMDS-203ENST00000467288 SMCR8Q8TEV9 937 aaPredicted RBP23.4■■□□□ 1.34
GMDS-203ENST00000467288 TRIM47Q96LD4 638 aa23.4■■□□□ 1.34
GMDS-203ENST00000467288 MX1P20591 662 aa23.39■■□□□ 1.33
GMDS-203ENST00000467288 APPBP2Q92624 585 aa23.39■■□□□ 1.33
GMDS-203ENST00000467288 TMOD4Q9NZQ9 345 aa23.39■■□□□ 1.33
GMDS-203ENST00000467288 SLC4A4Q9Y6R1 1079 aa23.39■■□□□ 1.33
GMDS-203ENST00000467288 RNF113AO15541 343 aaKnown RBP23.38■■□□□ 1.33
GMDS-203ENST00000467288 ZFYP08048 801 aaPredicted RBP23.38■■□□□ 1.33
GMDS-203ENST00000467288 OSBPP22059 807 aa23.38■■□□□ 1.33
GMDS-203ENST00000467288 HOXA7P31268 230 aaPredicted RBP23.38■■□□□ 1.33
GMDS-203ENST00000467288 EXOC6Q8TAG9 804 aa23.38■■□□□ 1.33
GMDS-203ENST00000467288 OSBP2Q969R2 916 aa23.38■■□□□ 1.33
GMDS-203ENST00000467288 STRBPQ96SI9 672 aaKnown RBP23.38■■□□□ 1.33
GMDS-203ENST00000467288 ASCC2Q9H1I8 757 aaPredicted RBP23.38■■□□□ 1.33
GMDS-203ENST00000467288 CABP5Q9NP86 173 aa23.38■■□□□ 1.33
GMDS-203ENST00000467288 ZBTB47Q9UFB7 747 aaPredicted RBP23.38■■□□□ 1.33
GMDS-203ENST00000467288 ECM2O94769 699 aaPredicted RBP23.37■■□□□ 1.33
GMDS-203ENST00000467288 FMNL1O95466 1100 aaPredicted RBP23.37■■□□□ 1.33
GMDS-203ENST00000467288 HOXD10P28358 340 aa23.37■■□□□ 1.33
GMDS-203ENST00000467288 GUCY1A2P33402 732 aa23.37■■□□□ 1.33
GMDS-203ENST00000467288 C12orf60Q5U649 245 aa23.37■■□□□ 1.33
GMDS-203ENST00000467288 SRRDQ9UH36 339 aa23.37■■□□□ 1.33
GMDS-203ENST00000467288 SWAP70Q9UH65 585 aa23.37■■□□□ 1.33
GMDS-203ENST00000467288 BRCA2P51587 3418 aa23.37■■□□□ 1.33
GMDS-203ENST00000467288 USP17L12C9JPN9 530 aa23.36■■□□□ 1.33
GMDS-203ENST00000467288 USP17L21D6R901 530 aa23.36■■□□□ 1.33
GMDS-203ENST00000467288 MYCP01106 439 aaPredicted RBP23.36■■□□□ 1.33
GMDS-203ENST00000467288 GCLCP48506 637 aaPredicted RBP23.36■■□□□ 1.33
GMDS-203ENST00000467288 FCGRTP55899 365 aa23.36■■□□□ 1.33
GMDS-203ENST00000467288 RAB3GAP1Q15042 981 aa23.36■■□□□ 1.33
GMDS-203ENST00000467288 USP17L2Q6R6M4 530 aa23.36■■□□□ 1.33
GMDS-203ENST00000467288 SMC5Q8IY18 1101 aa23.36■■□□□ 1.33
GMDS-203ENST00000467288 SLC44A5Q8NCS7 719 aa23.36■■□□□ 1.33
GMDS-203ENST00000467288 DYNLL2Q96FJ2 89 aa23.36■■□□□ 1.33
GMDS-203ENST00000467288 DDRGK1Q96HY6 314 aa23.36■■□□□ 1.33
GMDS-203ENST00000467288 C12orf42Q96LP6 360 aa23.36■■□□□ 1.33
GMDS-203ENST00000467288 EMILIN3Q9NT22 766 aa23.36■■□□□ 1.33
GMDS-203ENST00000467288 STAP2Q9UGK3 403 aa23.36■■□□□ 1.33
GMDS-203ENST00000467288 SUPT16HQ9Y5B9 1047 aaKnown RBP23.36■■□□□ 1.33
GMDS-203ENST00000467288 BAZ2AQ9UIF9 1905 aaKnown RBP23.35■■□□□ 1.33
GMDS-203ENST00000467288 FAM110CQ1W6H9 321 aa23.35■■□□□ 1.33
GMDS-203ENST00000467288 LRRFIP1Q32MZ4 808 aaKnown RBP23.35■■□□□ 1.33
GMDS-203ENST00000467288 ANKRD13CQ8N6S4 541 aa23.35■■□□□ 1.33
GMDS-203ENST00000467288 SH3TC2Q8TF17 1288 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms