RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 BTLAQ7Z6A9 289 aa7.54□□□□□ -1.2
PTCD3-207ENST00000467273 FBXO11Q86XK2 927 aa7.54□□□□□ -1.2
PTCD3-207ENST00000467273 TTLL6Q8N841 843 aa7.54□□□□□ -1.2
PTCD3-207ENST00000467273 TPCN2Q8NHX9 752 aa7.54□□□□□ -1.2
PTCD3-207ENST00000467273 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.54□□□□□ -1.2
PTCD3-207ENST00000467273 NRXN2Q9P2S2 1712 aa7.54□□□□□ -1.2
PTCD3-207ENST00000467273 PASKQ96RG2 1323 aa7.53□□□□□ -1.2
PTCD3-207ENST00000467273 ANKRD26Q9UPS8 1709 aa7.53□□□□□ -1.2
PTCD3-207ENST00000467273 SCN4AP35499 1836 aa7.53□□□□□ -1.2
PTCD3-207ENST00000467273 IQCA1LA6NCM1 817 aa7.53□□□□□ -1.2
PTCD3-207ENST00000467273 POLRMTO00411 1230 aaKnown RBP7.53□□□□□ -1.2
PTCD3-207ENST00000467273 HSP90AB1P08238 724 aaKnown RBP7.53□□□□□ -1.2
PTCD3-207ENST00000467273 PHKG2P15735 406 aa7.53□□□□□ -1.2
PTCD3-207ENST00000467273 FSTP19883 344 aa7.53□□□□□ -1.2
PTCD3-207ENST00000467273 TM4SF1P30408 202 aa7.53□□□□□ -1.2
PTCD3-207ENST00000467273 CHRNA5P30532 468 aa7.53□□□□□ -1.2
PTCD3-207ENST00000467273 HSP90AB2PQ58FF8 381 aa7.53□□□□□ -1.2
PTCD3-207ENST00000467273 LDHDQ86WU2 507 aa7.53□□□□□ -1.2
PTCD3-207ENST00000467273 DTWD1Q8N5C7 304 aa7.53□□□□□ -1.2
PTCD3-207ENST00000467273 ZMIZ1Q9ULJ6 1067 aa7.53□□□□□ -1.2
PTCD3-207ENST00000467273 MYH14Q7Z406 1995 aaKnown RBP7.53□□□□□ -1.2
PTCD3-207ENST00000467273 LTBP3Q9NS15 1303 aa7.52□□□□□ -1.2
PTCD3-207ENST00000467273 RASSF10A6NK89 507 aa7.52□□□□□ -1.21
PTCD3-207ENST00000467273 FYB1O15117 783 aa7.52□□□□□ -1.21
PTCD3-207ENST00000467273 HSPA8P11142 646 aaKnown RBP7.52□□□□□ -1.21
PTCD3-207ENST00000467273 HIRAP54198 1017 aaPredicted RBP7.52□□□□□ -1.21
PTCD3-207ENST00000467273 DDR1Q08345 913 aa7.52□□□□□ -1.21
PTCD3-207ENST00000467273 WFDC8Q8IUA0 241 aa7.52□□□□□ -1.21
PTCD3-207ENST00000467273 THSD7BQ9C0I4 1608 aa7.52□□□□□ -1.21
PTCD3-207ENST00000467273 ADAMTS7Q9UKP4 1686 aa7.51□□□□□ -1.21
PTCD3-207ENST00000467273 KIF20BQ96Q89 1820 aa7.51□□□□□ -1.21
PTCD3-207ENST00000467273 NFKBIEO00221 500 aa7.51□□□□□ -1.21
PTCD3-207ENST00000467273 LZTS3O60299 673 aaPredicted RBP7.51□□□□□ -1.21
PTCD3-207ENST00000467273 FBLN1P23142 703 aa7.51□□□□□ -1.21
PTCD3-207ENST00000467273 ELOAQ14241 798 aaKnown RBP7.51□□□□□ -1.21
PTCD3-207ENST00000467273 CRTC2Q53ET0 693 aaPredicted RBP7.51□□□□□ -1.21
PTCD3-207ENST00000467273 STK32AQ8WU08 396 aa7.51□□□□□ -1.21
PTCD3-207ENST00000467273 FMNL2Q96PY5 1086 aa7.51□□□□□ -1.21
PTCD3-207ENST00000467273 CARD11Q9BXL7 1154 aa7.51□□□□□ -1.21
PTCD3-207ENST00000467273 GSX2Q9BZM3 304 aa7.51□□□□□ -1.21
PTCD3-207ENST00000467273 EFCC1Q9HA90 598 aa7.51□□□□□ -1.21
PTCD3-207ENST00000467273 NOVA2Q9UNW9 492 aaKnown RBP7.51□□□□□ -1.21
PTCD3-207ENST00000467273 FER1L6Q2WGJ9 1857 aa7.51□□□□□ -1.21
PTCD3-207ENST00000467273 AFDNP55196 1824 aaKnown RBP7.5□□□□□ -1.21
PTCD3-207ENST00000467273 USP17L15C9J2P7 530 aa7.5□□□□□ -1.21
PTCD3-207ENST00000467273 USP17L10C9JJH3 530 aa7.5□□□□□ -1.21
PTCD3-207ENST00000467273 USP17L13C9JLJ4 530 aa7.5□□□□□ -1.21
PTCD3-207ENST00000467273 USP17L12C9JPN9 530 aa7.5□□□□□ -1.21
PTCD3-207ENST00000467273 USP17L11C9JVI0 530 aa7.5□□□□□ -1.21
PTCD3-207ENST00000467273 USP17L21D6R901 530 aa7.5□□□□□ -1.21
PTCD3-207ENST00000467273 USP17L18D6R9N7 530 aa7.5□□□□□ -1.21
PTCD3-207ENST00000467273 USP17L22D6RA61 530 aa7.5□□□□□ -1.21
PTCD3-207ENST00000467273 USP17L17D6RBQ6 530 aa7.5□□□□□ -1.21
PTCD3-207ENST00000467273 USP17L19D6RCP7 530 aa7.5□□□□□ -1.21
PTCD3-207ENST00000467273 USP17L20D6RJB6 530 aa7.5□□□□□ -1.21
PTCD3-207ENST00000467273 PPP1R12BO60237 982 aaPredicted RBP7.5□□□□□ -1.21
PTCD3-207ENST00000467273 BRD1O95696 1058 aa7.5□□□□□ -1.21
PTCD3-207ENST00000467273 CRKLP46109 303 aaKnown RBP7.5□□□□□ -1.21
PTCD3-207ENST00000467273 CD97P48960 835 aa7.5□□□□□ -1.21
PTCD3-207ENST00000467273 USP17L24Q0WX57 530 aa7.5□□□□□ -1.21
PTCD3-207ENST00000467273 CCINQ13939 588 aa7.5□□□□□ -1.21
PTCD3-207ENST00000467273 TMEM164Q5U3C3 297 aa7.5□□□□□ -1.21
PTCD3-207ENST00000467273 IGF2-ASQ6U949 168 aa7.5□□□□□ -1.21
PTCD3-207ENST00000467273 TRIM50Q86XT4 487 aa7.5□□□□□ -1.21
PTCD3-207ENST00000467273 WASHC2AQ641Q2 1341 aa7.5□□□□□ -1.21
PTCD3-207ENST00000467273 CCDC85CA6NKD9 419 aa7.49□□□□□ -1.21
PTCD3-207ENST00000467273 FAM196BA6NMK8 535 aa7.49□□□□□ -1.21
PTCD3-207ENST00000467273 H0YIN7 160 aa7.49□□□□□ -1.21
PTCD3-207ENST00000467273 RASA1P20936 1047 aa7.49□□□□□ -1.21
PTCD3-207ENST00000467273 PTK7Q13308 1070 aa7.49□□□□□ -1.21
PTCD3-207ENST00000467273 DEFB115Q30KQ5 88 aa7.49□□□□□ -1.21
PTCD3-207ENST00000467273 SOGA3Q5TF21 947 aa7.49□□□□□ -1.21
PTCD3-207ENST00000467273 ELMSAN1Q6PJG2 1045 aa7.49□□□□□ -1.21
PTCD3-207ENST00000467273 ALDH16A1Q8IZ83 802 aa7.49□□□□□ -1.21
PTCD3-207ENST00000467273 LPIN3Q9BQK8 851 aa7.49□□□□□ -1.21
PTCD3-207ENST00000467273 GZF1Q9H116 711 aaPredicted RBP7.49□□□□□ -1.21
PTCD3-207ENST00000467273 AKTIPQ9H8T0 292 aa7.49□□□□□ -1.21
PTCD3-207ENST00000467273 SRP68Q9UHB9 627 aaKnown RBP7.49□□□□□ -1.21
PTCD3-207ENST00000467273 KIAA1024Q9UPX6 916 aa7.49□□□□□ -1.21
PTCD3-207ENST00000467273 TJP1Q07157 1748 aa7.49□□□□□ -1.21
PTCD3-207ENST00000467273 PDE4DIPQ5VU43 2346 aa7.49□□□□□ -1.21
PTCD3-207ENST00000467273 ADAMTSL1Q8N6G6 1762 aa7.48□□□□□ -1.21
PTCD3-207ENST00000467273 CA12O43570 354 aa7.48□□□□□ -1.21
PTCD3-207ENST00000467273 PTCD1O75127 700 aaKnown RBP7.48□□□□□ -1.21
PTCD3-207ENST00000467273 ALX3O95076 343 aa7.48□□□□□ -1.21
PTCD3-207ENST00000467273 TAL1P17542 331 aaPredicted RBP7.48□□□□□ -1.21
PTCD3-207ENST00000467273 PLAURQ03405 335 aa7.48□□□□□ -1.21
PTCD3-207ENST00000467273 GRIK5Q16478 980 aa7.48□□□□□ -1.21
PTCD3-207ENST00000467273 PCSK7Q16549 785 aa7.48□□□□□ -1.21
PTCD3-207ENST00000467273 HIF1AQ16665 826 aa7.48□□□□□ -1.21
PTCD3-207ENST00000467273 PERM1Q5SV97 790 aa7.48□□□□□ -1.21
PTCD3-207ENST00000467273 CCDC102BQ68D86 513 aa7.48□□□□□ -1.21
PTCD3-207ENST00000467273 PNMA8AQ86V59 439 aaPredicted RBP7.48□□□□□ -1.21
PTCD3-207ENST00000467273 GGNBP2Q9H3C7 697 aa7.48□□□□□ -1.21
PTCD3-207ENST00000467273 TAF1DQ9H5J8 278 aaPredicted RBP7.48□□□□□ -1.21
PTCD3-207ENST00000467273 RNF114Q9Y508 228 aa7.48□□□□□ -1.21
PTCD3-207ENST00000467273 OAS3Q9Y6K5 1087 aaKnown RBP7.48□□□□□ -1.21
PTCD3-207ENST00000467273 WDR33Q9C0J8 1336 aaKnown RBP7.48□□□□□ -1.21
PTCD3-207ENST00000467273 DEAF1O75398 565 aaPredicted RBP7.47□□□□□ -1.21
PTCD3-207ENST00000467273 ECE1P42892 770 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms