RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 FKBP1AP62942 108 aaKnown RBP8.47□□□□□ -1.05
CLDN4-204ENST00000466411 IRF5Q13568 498 aa8.47□□□□□ -1.05
CLDN4-204ENST00000466411 GORABQ5T7V8 394 aa8.47□□□□□ -1.05
CLDN4-204ENST00000466411 ATG9AQ7Z3C6 839 aa8.47□□□□□ -1.05
CLDN4-204ENST00000466411 CDAN1Q8IWY9 1227 aa8.47□□□□□ -1.05
CLDN4-204ENST00000466411 CLASRPQ8N2M8 674 aaKnown RBP8.47□□□□□ -1.05
CLDN4-204ENST00000466411 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.47□□□□□ -1.05
CLDN4-204ENST00000466411 TBC1D22AQ8WUA7 517 aa8.47□□□□□ -1.05
CLDN4-204ENST00000466411 ZNF594Q96JF6 807 aaPredicted RBP8.47□□□□□ -1.05
CLDN4-204ENST00000466411 CRBNQ96SW2 442 aa8.47□□□□□ -1.05
CLDN4-204ENST00000466411 UHRF1Q96T88 793 aaPredicted RBP8.47□□□□□ -1.05
CLDN4-204ENST00000466411 C11orf16Q9NQ32 467 aa8.47□□□□□ -1.05
CLDN4-204ENST00000466411 SUGT1Q9Y2Z0 365 aa8.47□□□□□ -1.05
CLDN4-204ENST00000466411 HCN4Q9Y3Q4 1203 aa8.47□□□□□ -1.05
CLDN4-204ENST00000466411 REV3LO60673 3130 aa8.47□□□□□ -1.05
CLDN4-204ENST00000466411 XIRP2A4UGR9 3374 aa8.46□□□□□ -1.05
CLDN4-204ENST00000466411 IRF6O14896 467 aa8.46□□□□□ -1.06
CLDN4-204ENST00000466411 FRAT2O75474 233 aaPredicted RBP8.46□□□□□ -1.06
CLDN4-204ENST00000466411 UQCRFS1P1P0C7P4 283 aa8.46□□□□□ -1.06
CLDN4-204ENST00000466411 IL1R1P14778 569 aa8.46□□□□□ -1.06
CLDN4-204ENST00000466411 HIBADHP31937 336 aaKnown RBP8.46□□□□□ -1.06
CLDN4-204ENST00000466411 FLT3LGP49771 235 aa8.46□□□□□ -1.06
CLDN4-204ENST00000466411 MRE11P49959 708 aa8.46□□□□□ -1.06
CLDN4-204ENST00000466411 MOGSQ13724 837 aa8.46□□□□□ -1.06
CLDN4-204ENST00000466411 RASA3Q14644 834 aa8.46□□□□□ -1.06
CLDN4-204ENST00000466411 LRRC24Q50LG9 513 aa8.46□□□□□ -1.06
CLDN4-204ENST00000466411 CCDC158Q5M9N0 1113 aa8.46□□□□□ -1.06
CLDN4-204ENST00000466411 TXNRD3Q86VQ6 643 aa8.46□□□□□ -1.06
CLDN4-204ENST00000466411 KIAA0825Q8IV33 1275 aa8.46□□□□□ -1.06
CLDN4-204ENST00000466411 PRMT6Q96LA8 375 aaPredicted RBP8.46□□□□□ -1.06
CLDN4-204ENST00000466411 LRRCC1Q9C099 1032 aa8.46□□□□□ -1.06
CLDN4-204ENST00000466411 EPHX3Q9H6B9 360 aa8.46□□□□□ -1.06
CLDN4-204ENST00000466411 C1orf115Q9H7X2 142 aa8.46□□□□□ -1.06
CLDN4-204ENST00000466411 MAST3O60307 1309 aa8.46□□□□□ -1.06
CLDN4-204ENST00000466411 MAST2Q6P0Q8 1798 aa8.45□□□□□ -1.06
CLDN4-204ENST00000466411 A0A1B0GUL7 405 aa8.45□□□□□ -1.06
CLDN4-204ENST00000466411 TAF5LO75529 589 aa8.45□□□□□ -1.06
CLDN4-204ENST00000466411 FGFR2P21802 821 aa8.45□□□□□ -1.06
CLDN4-204ENST00000466411 SMAD3P84022 425 aaKnown RBP8.45□□□□□ -1.06
CLDN4-204ENST00000466411 SHHQ15465 462 aa8.45□□□□□ -1.06
CLDN4-204ENST00000466411 LRRC26Q2I0M4 334 aa8.45□□□□□ -1.06
CLDN4-204ENST00000466411 CERS5Q8N5B7 392 aa8.45□□□□□ -1.06
CLDN4-204ENST00000466411 WDR66Q8TBY9 1149 aa8.45□□□□□ -1.06
CLDN4-204ENST00000466411 PTCD2Q8WV60 388 aaKnown RBP8.45□□□□□ -1.06
CLDN4-204ENST00000466411 ZNF512BQ96KM6 892 aaPredicted RBP8.45□□□□□ -1.06
CLDN4-204ENST00000466411 NECAB3Q96P71 396 aaPredicted RBP8.45□□□□□ -1.06
CLDN4-204ENST00000466411 PUS3Q9BZE2 481 aaKnown RBP8.45□□□□□ -1.06
CLDN4-204ENST00000466411 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.45□□□□□ -1.06
CLDN4-204ENST00000466411 C11orf49Q9H6J7 331 aa8.45□□□□□ -1.06
CLDN4-204ENST00000466411 DCTPP1Q9H773 170 aa8.45□□□□□ -1.06
CLDN4-204ENST00000466411 OGDHLQ9ULD0 1010 aa8.45□□□□□ -1.06
CLDN4-204ENST00000466411 DENND2AQ9ULE3 1009 aa8.45□□□□□ -1.06
CLDN4-204ENST00000466411 SNCAIPQ9Y6H5 919 aa8.45□□□□□ -1.06
CLDN4-204ENST00000466411 LTBP2Q14767 1821 aa8.45□□□□□ -1.06
CLDN4-204ENST00000466411 WDFY4Q6ZS81 3184 aa8.44□□□□□ -1.06
CLDN4-204ENST00000466411 CLRN2A0PK11 232 aa8.44□□□□□ -1.06
CLDN4-204ENST00000466411 IFIT2P09913 472 aaKnown RBP8.44□□□□□ -1.06
CLDN4-204ENST00000466411 TFCP2Q12800 502 aa8.44□□□□□ -1.06
CLDN4-204ENST00000466411 GRIN2CQ14957 1233 aa8.44□□□□□ -1.06
CLDN4-204ENST00000466411 DLGAP5Q15398 846 aa8.44□□□□□ -1.06
CLDN4-204ENST00000466411 TNNI3KQ59H18 835 aa8.44□□□□□ -1.06
CLDN4-204ENST00000466411 C9orf50Q5SZB4 431 aa8.44□□□□□ -1.06
CLDN4-204ENST00000466411 SPTY2D1Q68D10 685 aaPredicted RBP8.44□□□□□ -1.06
CLDN4-204ENST00000466411 TTLL5Q6EMB2 1281 aa8.44□□□□□ -1.06
CLDN4-204ENST00000466411 FBXO33Q7Z6M2 555 aa8.44□□□□□ -1.06
CLDN4-204ENST00000466411 ANKRD23Q86SG2 305 aa8.44□□□□□ -1.06
CLDN4-204ENST00000466411 TICAM2Q86XR7 235 aa8.44□□□□□ -1.06
CLDN4-204ENST00000466411 CERS3Q8IU89 383 aa8.44□□□□□ -1.06
CLDN4-204ENST00000466411 SLF2Q8IX21 1173 aa8.44□□□□□ -1.06
CLDN4-204ENST00000466411 KLHDC4Q8TBB5 520 aa8.44□□□□□ -1.06
CLDN4-204ENST00000466411 RHPN1Q8TCX5 695 aa8.44□□□□□ -1.06
CLDN4-204ENST00000466411 CD209Q9NNX6 404 aa8.44□□□□□ -1.06
CLDN4-204ENST00000466411 PA2G4Q9UQ80 394 aaKnown RBP8.44□□□□□ -1.06
CLDN4-204ENST00000466411 FPGT-TNNI3KV9GXZ4 949 aa8.44□□□□□ -1.06
CLDN4-204ENST00000466411 GPR37L1O60883 481 aa8.43□□□□□ -1.06
CLDN4-204ENST00000466411 WDHD1O75717 1129 aaPredicted RBP8.43□□□□□ -1.06
CLDN4-204ENST00000466411 BMP1P13497 986 aa8.43□□□□□ -1.06
CLDN4-204ENST00000466411 FCGRTP55899 365 aa8.43□□□□□ -1.06
CLDN4-204ENST00000466411 MRPS5P82675 430 aaKnown RBP8.43□□□□□ -1.06
CLDN4-204ENST00000466411 SNAPC2Q13487 334 aa8.43□□□□□ -1.06
CLDN4-204ENST00000466411 LRRFIP1Q32MZ4 808 aaKnown RBP8.43□□□□□ -1.06
CLDN4-204ENST00000466411 ERO1BQ86YB8 467 aa8.43□□□□□ -1.06
CLDN4-204ENST00000466411 GPIHBP1Q8IV16 184 aa8.43□□□□□ -1.06
CLDN4-204ENST00000466411 SIRT2Q8IXJ6 389 aa8.43□□□□□ -1.06
CLDN4-204ENST00000466411 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.43□□□□□ -1.06
CLDN4-204ENST00000466411 NEUROD6Q96NK8 337 aa8.43□□□□□ -1.06
CLDN4-204ENST00000466411 EXOC6BQ9Y2D4 811 aa8.43□□□□□ -1.06
CLDN4-204ENST00000466411 SALL1Q9NSC2 1324 aa8.43□□□□□ -1.06
CLDN4-204ENST00000466411 CFAP54Q96N23 3096 aa8.43□□□□□ -1.06
CLDN4-204ENST00000466411 GRXCR2A6NFK2 248 aa8.42□□□□□ -1.06
CLDN4-204ENST00000466411 PDHXO00330 501 aa8.42□□□□□ -1.06
CLDN4-204ENST00000466411 ERC2O15083 957 aa8.42□□□□□ -1.06
CLDN4-204ENST00000466411 ZMYND10O75800 440 aa8.42□□□□□ -1.06
CLDN4-204ENST00000466411 ARID4AP29374 1257 aaPredicted RBP8.42□□□□□ -1.06
CLDN4-204ENST00000466411 HDLBPQ00341 1268 aaKnown RBP8.42□□□□□ -1.06
CLDN4-204ENST00000466411 PPIL2Q13356 520 aa8.42□□□□□ -1.06
CLDN4-204ENST00000466411 TTF1Q15361 905 aaPredicted RBP8.42□□□□□ -1.06
CLDN4-204ENST00000466411 TTC39AQ5SRH9 613 aa8.42□□□□□ -1.06
CLDN4-204ENST00000466411 TDRD7Q8NHU6 1098 aaKnown RBP8.42□□□□□ -1.06
CLDN4-204ENST00000466411 EXOC6Q8TAG9 804 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms