RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 DCDC2CA8MYV0 355 aa7.6□□□□□ -1.19
LRCH3-211ENST00000466054 EIF1AYO14602 144 aaKnown RBP7.6□□□□□ -1.19
LRCH3-211ENST00000466054 FANCGO15287 622 aa7.6□□□□□ -1.19
LRCH3-211ENST00000466054 CCDC27Q2M243 656 aa7.6□□□□□ -1.19
LRCH3-211ENST00000466054 AKAP2Q9Y2D5 859 aa7.6□□□□□ -1.19
LRCH3-211ENST00000466054 FOXD2O60548 495 aaPredicted RBP7.59□□□□□ -1.19
LRCH3-211ENST00000466054 LRIG2O94898 1065 aa7.59□□□□□ -1.19
LRCH3-211ENST00000466054 XRCC5P13010 732 aaKnown RBP7.59□□□□□ -1.19
LRCH3-211ENST00000466054 SYN1P17600 705 aa7.59□□□□□ -1.19
LRCH3-211ENST00000466054 NME2P22392 152 aa7.59□□□□□ -1.19
LRCH3-211ENST00000466054 FGD1P98174 961 aa7.59□□□□□ -1.19
LRCH3-211ENST00000466054 C12orf40Q86WS4 652 aa7.59□□□□□ -1.19
LRCH3-211ENST00000466054 STK35Q8TDR2 534 aa7.59□□□□□ -1.19
LRCH3-211ENST00000466054 CITED4Q96RK1 184 aa7.59□□□□□ -1.19
LRCH3-211ENST00000466054 NLRP2Q9NX02 1062 aa7.59□□□□□ -1.19
LRCH3-211ENST00000466054 PRR33A8MZF0 331 aa7.58□□□□□ -1.2
LRCH3-211ENST00000466054 HK2P52789 917 aa7.58□□□□□ -1.2
LRCH3-211ENST00000466054 UBE3DQ7Z6J8 389 aa7.58□□□□□ -1.2
LRCH3-211ENST00000466054 THAP5Q7Z6K1 395 aa7.58□□□□□ -1.2
LRCH3-211ENST00000466054 DCTN4Q9UJW0 460 aa7.58□□□□□ -1.2
LRCH3-211ENST00000466054 SAMM50Q9Y512 469 aa7.58□□□□□ -1.2
LRCH3-211ENST00000466054 NFIXQ14938 502 aa7.57□□□□□ -1.2
LRCH3-211ENST00000466054 ZNF507Q8TCN5 953 aa7.57□□□□□ -1.2
LRCH3-211ENST00000466054 UBE2FQ969M7 185 aa7.57□□□□□ -1.2
LRCH3-211ENST00000466054 ELMO3Q96BJ8 720 aa7.57□□□□□ -1.2
LRCH3-211ENST00000466054 RBCK1Q9BYM8 510 aa7.57□□□□□ -1.2
LRCH3-211ENST00000466054 PODXL2Q9NZ53 605 aa7.57□□□□□ -1.2
LRCH3-211ENST00000466054 ZSWIM5Q9P217 1185 aa7.57□□□□□ -1.2
LRCH3-211ENST00000466054 CBX7O95931 251 aa7.56□□□□□ -1.2
LRCH3-211ENST00000466054 ZBTB37Q5TC79 503 aa7.56□□□□□ -1.2
LRCH3-211ENST00000466054 TMEM132EQ6IEE7 984 aa7.56□□□□□ -1.2
LRCH3-211ENST00000466054 ZNF746Q6NUN9 644 aaPredicted RBP7.56□□□□□ -1.2
LRCH3-211ENST00000466054 EPS8L3Q8TE67 593 aaKnown RBP7.56□□□□□ -1.2
LRCH3-211ENST00000466054 MIPEPQ99797 713 aa7.56□□□□□ -1.2
LRCH3-211ENST00000466054 NIF3L1Q9GZT8 377 aa7.56□□□□□ -1.2
LRCH3-211ENST00000466054 SLITRK5O94991 958 aa7.55□□□□□ -1.2
LRCH3-211ENST00000466054 SRFP11831 508 aa7.55□□□□□ -1.2
LRCH3-211ENST00000466054 ERCC3P19447 782 aa7.55□□□□□ -1.2
LRCH3-211ENST00000466054 MAPK1P28482 360 aa7.55□□□□□ -1.2
LRCH3-211ENST00000466054 TCERG1LQ5VWI1 586 aa7.55□□□□□ -1.2
LRCH3-211ENST00000466054 ERICH6BQ5W0A0 696 aa7.55□□□□□ -1.2
LRCH3-211ENST00000466054 C22orf34Q6ZV56 151 aa7.55□□□□□ -1.2
LRCH3-211ENST00000466054 TMEM59LQ9UK28 342 aa7.55□□□□□ -1.2
LRCH3-211ENST00000466054 CCDC9Q9Y3X0 531 aaKnown RBP7.55□□□□□ -1.2
LRCH3-211ENST00000466054 DNAJC25-GNG10A0A024R161 153 aa7.54□□□□□ -1.2
LRCH3-211ENST00000466054 NTF4P34130 210 aa7.54□□□□□ -1.2
LRCH3-211ENST00000466054 MFAP1P55081 439 aaKnown RBP7.54□□□□□ -1.2
LRCH3-211ENST00000466054 ZSCAN29Q8IWY8 852 aaPredicted RBP7.54□□□□□ -1.2
LRCH3-211ENST00000466054 FAM129BQ96TA1 746 aa7.54□□□□□ -1.2
LRCH3-211ENST00000466054 CNOT6Q9ULM6 557 aaKnown RBP7.54□□□□□ -1.2
LRCH3-211ENST00000466054 PCDHA4Q9UN74 947 aa7.54□□□□□ -1.2
LRCH3-211ENST00000466054 CAPN6Q9Y6Q1 641 aa7.54□□□□□ -1.2
LRCH3-211ENST00000466054 CNTNAP4Q9C0A0 1308 aa7.53□□□□□ -1.2
LRCH3-211ENST00000466054 RFXAPO00287 272 aa7.53□□□□□ -1.2
LRCH3-211ENST00000466054 CYP7A1P22680 504 aa7.53□□□□□ -1.2
LRCH3-211ENST00000466054 ERVFC1P60507 584 aa7.53□□□□□ -1.2
LRCH3-211ENST00000466054 ZNF252P-AS1Q0IIN9 211 aa7.53□□□□□ -1.2
LRCH3-211ENST00000466054 RALGPS1Q5JS13 557 aa7.53□□□□□ -1.2
LRCH3-211ENST00000466054 BAHD1Q8TBE0 780 aaPredicted RBP7.53□□□□□ -1.2
LRCH3-211ENST00000466054 ASB16Q96NS5 453 aa7.53□□□□□ -1.2
LRCH3-211ENST00000466054 ST14Q9Y5Y6 855 aa7.53□□□□□ -1.2
LRCH3-211ENST00000466054 A0A0G2JLL6 359 aaPredicted RBP7.52□□□□□ -1.21
LRCH3-211ENST00000466054 PRAMEF27A3QJZ7 478 aa7.52□□□□□ -1.21
LRCH3-211ENST00000466054 TRIM37O94972 964 aa7.52□□□□□ -1.21
LRCH3-211ENST00000466054 DLG4P78352 724 aa7.52□□□□□ -1.21
LRCH3-211ENST00000466054 ZNF385BQ569K4 471 aa7.52□□□□□ -1.21
LRCH3-211ENST00000466054 ZNF605Q86T29 641 aa7.52□□□□□ -1.21
LRCH3-211ENST00000466054 BORCS6Q96GS4 357 aa7.52□□□□□ -1.21
LRCH3-211ENST00000466054 DMRTB1Q96MA1 342 aa7.52□□□□□ -1.21
LRCH3-211ENST00000466054 SLC6A17Q9H1V8 727 aa7.52□□□□□ -1.21
LRCH3-211ENST00000466054 LLGL2Q6P1M3 1020 aa7.51□□□□□ -1.21
LRCH3-211ENST00000466054 MPRIPQ6WCQ1 1025 aa7.51□□□□□ -1.21
LRCH3-211ENST00000466054 TMPRSS7Q7RTY8 843 aa7.51□□□□□ -1.21
LRCH3-211ENST00000466054 TMEM151BQ8IW70 566 aa7.51□□□□□ -1.21
LRCH3-211ENST00000466054 MFSD2AQ8NA29 543 aa7.51□□□□□ -1.21
LRCH3-211ENST00000466054 BCO2Q9BYV7 579 aa7.51□□□□□ -1.21
LRCH3-211ENST00000466054 RNF32Q9H0A6 362 aa7.51□□□□□ -1.21
LRCH3-211ENST00000466054 SEMA7AO75326 666 aa7.5□□□□□ -1.21
LRCH3-211ENST00000466054 HPXP02790 462 aa7.5□□□□□ -1.21
LRCH3-211ENST00000466054 LRRC14Q15048 493 aa7.5□□□□□ -1.21
LRCH3-211ENST00000466054 LETMD1Q6P1Q0 360 aa7.5□□□□□ -1.21
LRCH3-211ENST00000466054 DNAJC14Q6Y2X3 702 aaPredicted RBP7.5□□□□□ -1.21
LRCH3-211ENST00000466054 PRRT2Q7Z6L0 340 aaPredicted RBP7.5□□□□□ -1.21
LRCH3-211ENST00000466054 CREG2Q8IUH2 290 aa7.5□□□□□ -1.21
LRCH3-211ENST00000466054 GRIN3AQ8TCU5 1115 aa7.5□□□□□ -1.21
LRCH3-211ENST00000466054 ALKBH8Q96BT7 664 aaKnown RBP7.5□□□□□ -1.21
LRCH3-211ENST00000466054 SYTL4Q96C24 671 aaPredicted RBP7.5□□□□□ -1.21
LRCH3-211ENST00000466054 KRTAP9-8Q9BYQ0 159 aa7.5□□□□□ -1.21
LRCH3-211ENST00000466054 GPR182O15218 404 aa7.49□□□□□ -1.21
LRCH3-211ENST00000466054 SASH1O94885 1247 aa7.49□□□□□ -1.21
LRCH3-211ENST00000466054 TRHRP34981 398 aaPredicted RBP7.49□□□□□ -1.21
LRCH3-211ENST00000466054 RING1Q06587 406 aa7.49□□□□□ -1.21
LRCH3-211ENST00000466054 TMC7Q7Z402 723 aa7.49□□□□□ -1.21
LRCH3-211ENST00000466054 IRF2BP1Q8IU81 584 aa7.49□□□□□ -1.21
LRCH3-211ENST00000466054 COX4I2Q96KJ9 171 aa7.49□□□□□ -1.21
LRCH3-211ENST00000466054 CEP44Q9C0F1 390 aa7.49□□□□□ -1.21
LRCH3-211ENST00000466054 MCOLN1Q9GZU1 580 aa7.49□□□□□ -1.21
LRCH3-211ENST00000466054 ADAMTS10Q9H324 1103 aa7.49□□□□□ -1.21
LRCH3-211ENST00000466054 IGHA2P01877 340 aa7.48□□□□□ -1.21
LRCH3-211ENST00000466054 KIR3DL1P43629 444 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 663.6 ms