RNA–Protein interactions for RNA: ENST00000465934.1

CACNA1C-224, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-224ENST00000465934 ANKRD13CQ8N6S4 541 aa17.04■□□□□ 0.32
CACNA1C-224ENST00000465934 HAUS7Q99871 368 aa17.04■□□□□ 0.32
CACNA1C-224ENST00000465934 TBC1D2Q9BYX2 928 aa17.04■□□□□ 0.32
CACNA1C-224ENST00000465934 AS3MTQ9HBK9 375 aa17.04■□□□□ 0.32
CACNA1C-224ENST00000465934 GABRQQ9UN88 632 aa17.04■□□□□ 0.32
CACNA1C-224ENST00000465934 PTPRFP10586 1907 aa17.04■□□□□ 0.32
CACNA1C-224ENST00000465934 FOCADQ5VW36 1801 aa17.03■□□□□ 0.32
CACNA1C-224ENST00000465934 GH2P01242 217 aa17.03■□□□□ 0.32
CACNA1C-224ENST00000465934 BACE1P56817 501 aa17.03■□□□□ 0.32
CACNA1C-224ENST00000465934 TATDN1Q6P1N9 297 aa17.03■□□□□ 0.32
CACNA1C-224ENST00000465934 NBPF11Q86T75 865 aa17.03■□□□□ 0.32
CACNA1C-224ENST00000465934 SDR42E1Q8WUS8 393 aa17.03■□□□□ 0.32
CACNA1C-224ENST00000465934 ASCC2Q9H1I8 757 aaPredicted RBP17.03■□□□□ 0.32
CACNA1C-224ENST00000465934 EHD4Q9H223 541 aa17.03■□□□□ 0.32
CACNA1C-224ENST00000465934 ARMT1Q9H993 441 aa17.03■□□□□ 0.32
CACNA1C-224ENST00000465934 SERPINB13Q9UIV8 391 aa17.03■□□□□ 0.32
CACNA1C-224ENST00000465934 ADD2P35612 726 aa17.02■□□□□ 0.32
CACNA1C-224ENST00000465934 PRMT2P55345 433 aa17.02■□□□□ 0.32
CACNA1C-224ENST00000465934 TSHZ3Q63HK5 1081 aa17.02■□□□□ 0.32
CACNA1C-224ENST00000465934 RAET1EQ8TD07 263 aa17.02■□□□□ 0.32
CACNA1C-224ENST00000465934 CRNKL1Q9BZJ0 848 aaKnown RBP17.02■□□□□ 0.32
CACNA1C-224ENST00000465934 PNMA3Q9UL41 463 aa17.02■□□□□ 0.32
CACNA1C-224ENST00000465934 PCDHB15Q9Y5E8 787 aa17.02■□□□□ 0.32
CACNA1C-224ENST00000465934 ATAD5Q96QE3 1844 aa17.01■□□□□ 0.31
CACNA1C-224ENST00000465934 PRKAB2O43741 272 aa17.01■□□□□ 0.31
CACNA1C-224ENST00000465934 PEX10O60683 326 aa17.01■□□□□ 0.31
CACNA1C-224ENST00000465934 CYP2D6P10635 497 aa17.01■□□□□ 0.31
CACNA1C-224ENST00000465934 HOXD10P28358 340 aa17.01■□□□□ 0.31
CACNA1C-224ENST00000465934 SHMT1P34896 483 aa17.01■□□□□ 0.31
CACNA1C-224ENST00000465934 RRP1P56182 461 aaKnown RBP17.01■□□□□ 0.31
CACNA1C-224ENST00000465934 MTFR1Q15390 333 aa17.01■□□□□ 0.31
CACNA1C-224ENST00000465934 TTC6Q86TZ1 520 aa17.01■□□□□ 0.31
CACNA1C-224ENST00000465934 YTHDC1Q96MU7 727 aaKnown RBP17.01■□□□□ 0.31
CACNA1C-224ENST00000465934 TMEM106CQ9BVX2 250 aa17.01■□□□□ 0.31
CACNA1C-224ENST00000465934 DCTPP1Q9H773 170 aa17.01■□□□□ 0.31
CACNA1C-224ENST00000465934 MCM9Q9NXL9 1143 aa17.01■□□□□ 0.31
CACNA1C-224ENST00000465934 LOC285556D6RIA3 1793 aa17.01■□□□□ 0.31
CACNA1C-224ENST00000465934 USP17L10C9JJH3 530 aa17■□□□□ 0.31
CACNA1C-224ENST00000465934 TNPO2O14787 897 aaKnown RBP17■□□□□ 0.31
CACNA1C-224ENST00000465934 MBD4O95243 580 aa17■□□□□ 0.31
CACNA1C-224ENST00000465934 POLR3DP05423 398 aaPredicted RBP17■□□□□ 0.31
CACNA1C-224ENST00000465934 GRK4P32298 578 aa17■□□□□ 0.31
CACNA1C-224ENST00000465934 FAM110CQ1W6H9 321 aa17■□□□□ 0.31
CACNA1C-224ENST00000465934 DDX60LQ5H9U9 1706 aaKnown RBP17■□□□□ 0.31
CACNA1C-224ENST00000465934 DCP1AQ9NPI6 582 aaPredicted RBP17■□□□□ 0.31
CACNA1C-224ENST00000465934 EMILIN3Q9NT22 766 aa17■□□□□ 0.31
CACNA1C-224ENST00000465934 GINM1Q9NU53 330 aa17■□□□□ 0.31
CACNA1C-224ENST00000465934 TMOD4Q9NZQ9 345 aa17■□□□□ 0.31
CACNA1C-224ENST00000465934 SMIM22K7EJ46 135 aa16.99■□□□□ 0.31
CACNA1C-224ENST00000465934 FLT3LGP49771 235 aa16.99■□□□□ 0.31
CACNA1C-224ENST00000465934 GABPAQ06546 454 aa16.99■□□□□ 0.31
CACNA1C-224ENST00000465934 PABPC4Q13310 644 aaKnown RBP eCLIP16.99■□□□□ 0.31
CACNA1C-224ENST00000465934 RAB3GAP1Q15042 981 aa16.99■□□□□ 0.31
CACNA1C-224ENST00000465934 ZYXQ15942 572 aaKnown RBP16.99■□□□□ 0.31
CACNA1C-224ENST00000465934 CERKLQ49MI3 558 aaPredicted RBP16.99■□□□□ 0.31
CACNA1C-224ENST00000465934 SLC44A5Q8NCS7 719 aa16.99■□□□□ 0.31
CACNA1C-224ENST00000465934 ACER1Q8TDN7 264 aa16.99■□□□□ 0.31
CACNA1C-224ENST00000465934 ECHDC1Q9NTX5 307 aa16.99■□□□□ 0.31
CACNA1C-224ENST00000465934 C19orf81C9J6K1 198 aa16.98■□□□□ 0.31
CACNA1C-224ENST00000465934 ELNP15502 786 aa16.98■□□□□ 0.31
CACNA1C-224ENST00000465934 GUCY1A2P33402 732 aa16.98■□□□□ 0.31
CACNA1C-224ENST00000465934 GCLCP48506 637 aaPredicted RBP16.98■□□□□ 0.31
CACNA1C-224ENST00000465934 IRX3P78415 501 aaPredicted RBP16.98■□□□□ 0.31
CACNA1C-224ENST00000465934 ABCB5Q2M3G0 1257 aa16.98■□□□□ 0.31
CACNA1C-224ENST00000465934 P2RX7Q99572 595 aaKnown RBP16.98■□□□□ 0.31
CACNA1C-224ENST00000465934 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.98■□□□□ 0.31
CACNA1C-224ENST00000465934 CYP2D7A0A087X1C5 515 aa16.97■□□□□ 0.31
CACNA1C-224ENST00000465934 HOXA7P31268 230 aaPredicted RBP16.97■□□□□ 0.31
CACNA1C-224ENST00000465934 POTEEQ6S8J3 1075 aa16.97■□□□□ 0.31
CACNA1C-224ENST00000465934 DYNLL2Q96FJ2 89 aa16.97■□□□□ 0.31
CACNA1C-224ENST00000465934 FEZ1Q99689 392 aa16.97■□□□□ 0.31
CACNA1C-224ENST00000465934 TXNRD2Q9NNW7 524 aa16.97■□□□□ 0.31
CACNA1C-224ENST00000465934 BIN2Q9UBW5 565 aaPredicted RBP16.97■□□□□ 0.31
CACNA1C-224ENST00000465934 TAOK2Q9UL54 1235 aa16.97■□□□□ 0.31
CACNA1C-224ENST00000465934 KIAA0100Q14667 2235 aaKnown RBP16.97■□□□□ 0.31
CACNA1C-224ENST00000465934 ADCY3O60266 1144 aa16.96■□□□□ 0.31
CACNA1C-224ENST00000465934 CCL5P13501 91 aa16.96■□□□□ 0.31
CACNA1C-224ENST00000465934 HERVK_113P62684 666 aa16.96■□□□□ 0.31
CACNA1C-224ENST00000465934 SEPT2Q15019 361 aa16.96■□□□□ 0.31
CACNA1C-224ENST00000465934 UBE3CQ15386 1083 aa16.96■□□□□ 0.31
CACNA1C-224ENST00000465934 PRPF38BQ5VTL8 546 aaKnown RBP16.96■□□□□ 0.31
CACNA1C-224ENST00000465934 USP17L2Q6R6M4 530 aa16.96■□□□□ 0.31
CACNA1C-224ENST00000465934 SLAIN1Q8ND83 568 aa16.96■□□□□ 0.31
CACNA1C-224ENST00000465934 OTUD7AQ8TE49 926 aaPredicted RBP16.96■□□□□ 0.31
CACNA1C-224ENST00000465934 SHISA4Q96DD7 197 aa16.96■□□□□ 0.31
CACNA1C-224ENST00000465934 CRBNQ96SW2 442 aa16.96■□□□□ 0.31
CACNA1C-224ENST00000465934 PUS7LQ9H0K6 701 aaKnown RBP16.96■□□□□ 0.31
CACNA1C-224ENST00000465934 PDE4DIPQ5VU43 2346 aa16.96■□□□□ 0.3
CACNA1C-224ENST00000465934 MYH1P12882 1939 aa16.96■□□□□ 0.3
CACNA1C-224ENST00000465934 RBBP6Q7Z6E9 1792 aaKnown RBP16.95■□□□□ 0.3
CACNA1C-224ENST00000465934 MORF4L1Q9UBU8 362 aa16.95■□□□□ 0.3
CACNA1C-224ENST00000465934 NAV1Q8NEY1 1877 aa16.95■□□□□ 0.3
CACNA1C-224ENST00000465934 MPHOSPH10O00566 681 aaKnown RBP16.94■□□□□ 0.3
CACNA1C-224ENST00000465934 IRF5Q13568 498 aa16.94■□□□□ 0.3
CACNA1C-224ENST00000465934 CLEC10AQ8IUN9 316 aa16.94■□□□□ 0.3
CACNA1C-224ENST00000465934 COA7Q96BR5 231 aa16.94■□□□□ 0.3
CACNA1C-224ENST00000465934 GPATCH3Q96I76 525 aa16.94■□□□□ 0.3
CACNA1C-224ENST00000465934 C12orf42Q96LP6 360 aa16.94■□□□□ 0.3
CACNA1C-224ENST00000465934 KIAA1683Q9H0B3 1180 aa16.94■□□□□ 0.3
CACNA1C-224ENST00000465934 UNC93B1Q9H1C4 597 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms