RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 TRIM47Q96LD4 638 aa26.35■■□□□ 1.81
LIME1-203ENST00000465591 WDR18Q9BV38 432 aa26.35■■□□□ 1.81
LIME1-203ENST00000465591 TBC1D2Q9BYX2 928 aa26.35■■□□□ 1.81
LIME1-203ENST00000465591 SERPINB13Q9UIV8 391 aa26.35■■□□□ 1.81
LIME1-203ENST00000465591 PRKAB2O43741 272 aa26.34■■□□□ 1.81
LIME1-203ENST00000465591 MBD4O95243 580 aa26.34■■□□□ 1.81
LIME1-203ENST00000465591 KIF22Q14807 665 aa26.34■■□□□ 1.81
LIME1-203ENST00000465591 SH3D19Q5HYK7 790 aa26.34■■□□□ 1.81
LIME1-203ENST00000465591 OTUD7AQ8TE49 926 aaPredicted RBP26.34■■□□□ 1.81
LIME1-203ENST00000465591 AS3MTQ9HBK9 375 aa26.34■■□□□ 1.81
LIME1-203ENST00000465591 DCP1AQ9NPI6 582 aaPredicted RBP26.34■■□□□ 1.81
LIME1-203ENST00000465591 DOCK3Q8IZD9 2030 aa26.34■■□□□ 1.81
LIME1-203ENST00000465591 PSMC4P43686 418 aa26.33■■□□□ 1.81
LIME1-203ENST00000465591 MTMR2Q13614 643 aa26.33■■□□□ 1.81
LIME1-203ENST00000465591 ARHGEF6Q15052 776 aa26.33■■□□□ 1.81
LIME1-203ENST00000465591 TTC6Q86TZ1 520 aa26.33■■□□□ 1.81
LIME1-203ENST00000465591 ARMC5Q96C12 935 aa26.33■■□□□ 1.81
LIME1-203ENST00000465591 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.33■■□□□ 1.813e-7■■■■■ 30.8
LIME1-203ENST00000465591 GH2P01242 217 aa26.32■■□□□ 1.8
LIME1-203ENST00000465591 CYP2D6P10635 497 aa26.32■■□□□ 1.8
LIME1-203ENST00000465591 SHMT1P34896 483 aa26.32■■□□□ 1.8
LIME1-203ENST00000465591 BACE1P56817 501 aa26.32■■□□□ 1.8
LIME1-203ENST00000465591 GABPAQ06546 454 aa26.32■■□□□ 1.8
LIME1-203ENST00000465591 UBE3CQ15386 1083 aa26.32■■□□□ 1.8
LIME1-203ENST00000465591 MCM9Q9NXL9 1143 aa26.32■■□□□ 1.8
LIME1-203ENST00000465591 POLR3DP05423 398 aaPredicted RBP26.31■■□□□ 1.8
LIME1-203ENST00000465591 GINM1Q9NU53 330 aa26.31■■□□□ 1.8
LIME1-203ENST00000465591 TNRC18O15417 2968 aaPredicted RBP26.31■■□□□ 1.8
LIME1-203ENST00000465591 PDE4DIPQ5VU43 2346 aa26.3■■□□□ 1.8
LIME1-203ENST00000465591 SMIM22K7EJ46 135 aa26.3■■□□□ 1.8
LIME1-203ENST00000465591 OSBPP22059 807 aa26.3■■□□□ 1.8
LIME1-203ENST00000465591 SMCR8Q8TEV9 937 aaPredicted RBP26.3■■□□□ 1.8
LIME1-203ENST00000465591 PUS7LQ9H0K6 701 aaKnown RBP26.3■■□□□ 1.8
LIME1-203ENST00000465591 RBBP6Q7Z6E9 1792 aaKnown RBP26.3■■□□□ 1.8
LIME1-203ENST00000465591 POTEFA5A3E0 1075 aa26.29■■□□□ 1.8
LIME1-203ENST00000465591 SRRDQ9UH36 339 aa26.29■■□□□ 1.8
LIME1-203ENST00000465591 MYH8P13535 1937 aa26.29■■□□□ 1.8
LIME1-203ENST00000465591 FMNL1O95466 1100 aaPredicted RBP26.28■■□□□ 1.8
LIME1-203ENST00000465591 GNRH1P01148 92 aa26.28■■□□□ 1.8
LIME1-203ENST00000465591 CERKLQ49MI3 558 aaPredicted RBP26.28■■□□□ 1.8
LIME1-203ENST00000465591 KBTBD3Q8NAB2 608 aa26.28■■□□□ 1.8
LIME1-203ENST00000465591 SLC44A5Q8NCS7 719 aa26.28■■□□□ 1.8
LIME1-203ENST00000465591 GPATCH3Q96I76 525 aa26.28■■□□□ 1.8
LIME1-203ENST00000465591 ZNF333Q96JL9 665 aa26.28■■□□□ 1.8
LIME1-203ENST00000465591 ASCC2Q9H1I8 757 aaPredicted RBP26.28■■□□□ 1.8
LIME1-203ENST00000465591 USP17L10C9JJH3 530 aa26.27■■□□□ 1.8
LIME1-203ENST00000465591 GUCY1A2P33402 732 aa26.27■■□□□ 1.8
LIME1-203ENST00000465591 SLC9C1Q4G0N8 1177 aa26.27■■□□□ 1.8
LIME1-203ENST00000465591 ANKRD13CQ8N6S4 541 aa26.27■■□□□ 1.8
LIME1-203ENST00000465591 PI4K2BQ8TCG2 481 aa26.27■■□□□ 1.8
LIME1-203ENST00000465591 SH3TC2Q8TF17 1288 aa26.27■■□□□ 1.8
LIME1-203ENST00000465591 PNMA3Q9UL41 463 aa26.27■■□□□ 1.8
LIME1-203ENST00000465591 CYP2D7A0A087X1C5 515 aa26.26■■□□□ 1.79
LIME1-203ENST00000465591 ABCB5Q2M3G0 1257 aa26.26■■□□□ 1.79
LIME1-203ENST00000465591 DYNLL2Q96FJ2 89 aa26.26■■□□□ 1.79
LIME1-203ENST00000465591 EMILIN3Q9NT22 766 aa26.26■■□□□ 1.79
LIME1-203ENST00000465591 BRCA2P51587 3418 aa26.25■■□□□ 1.79
LIME1-203ENST00000465591 SALL3Q9BXA9 1300 aa26.25■■□□□ 1.79
LIME1-203ENST00000465591 C19orf81C9J6K1 198 aa26.25■■□□□ 1.79
LIME1-203ENST00000465591 PRMT2P55345 433 aa26.25■■□□□ 1.79
LIME1-203ENST00000465591 FCGRTP55899 365 aa26.25■■□□□ 1.79
LIME1-203ENST00000465591 RAB3GAP1Q15042 981 aa26.25■■□□□ 1.79
LIME1-203ENST00000465591 ZSCAN25Q6NSZ9 544 aa26.25■■□□□ 1.79
LIME1-203ENST00000465591 ACER1Q8TDN7 264 aa26.25■■□□□ 1.79
LIME1-203ENST00000465591 ATP8A2Q9NTI2 1148 aa26.25■■□□□ 1.79
LIME1-203ENST00000465591 TMOD4Q9NZQ9 345 aa26.25■■□□□ 1.79
LIME1-203ENST00000465591 GABRQQ9UN88 632 aa26.25■■□□□ 1.79
LIME1-203ENST00000465591 TTC41PQ6P2S7 1318 aa26.24■■□□□ 1.79
LIME1-203ENST00000465591 MYPNQ86TC9 1320 aa26.24■■□□□ 1.79
LIME1-203ENST00000465591 PRKCZQ05513 592 aa26.24■■□□□ 1.79
LIME1-203ENST00000465591 PABPC4Q13310 644 aaKnown RBP eCLIP26.24■■□□□ 1.79
LIME1-203ENST00000465591 OSBP2Q969R2 916 aa26.24■■□□□ 1.79
LIME1-203ENST00000465591 SLC4A4Q9Y6R1 1079 aa26.24■■□□□ 1.79
LIME1-203ENST00000465591 PEX10O60683 326 aa26.23■■□□□ 1.79
LIME1-203ENST00000465591 MYCP01106 439 aaPredicted RBP26.23■■□□□ 1.79
LIME1-203ENST00000465591 HOXA7P31268 230 aaPredicted RBP26.23■■□□□ 1.79
LIME1-203ENST00000465591 HDAC1Q13547 482 aaPredicted RBP26.23■■□□□ 1.79
LIME1-203ENST00000465591 ZYXQ15942 572 aaKnown RBP26.23■■□□□ 1.79
LIME1-203ENST00000465591 FAM110CQ1W6H9 321 aa26.23■■□□□ 1.79
LIME1-203ENST00000465591 USP17L12C9JPN9 530 aa26.22■■□□□ 1.79
LIME1-203ENST00000465591 USP17L21D6R901 530 aa26.22■■□□□ 1.79
LIME1-203ENST00000465591 HOXD10P28358 340 aa26.22■■□□□ 1.79
LIME1-203ENST00000465591 SEPT2Q15019 361 aa26.22■■□□□ 1.79
LIME1-203ENST00000465591 ANKRD45Q5TZF3 282 aa26.22■■□□□ 1.79
LIME1-203ENST00000465591 C12orf60Q5U649 245 aa26.22■■□□□ 1.79
LIME1-203ENST00000465591 STRBPQ96SI9 672 aaKnown RBP26.22■■□□□ 1.79
LIME1-203ENST00000465591 P2RX7Q99572 595 aaKnown RBP26.22■■□□□ 1.79
LIME1-203ENST00000465591 RNF113AO15541 343 aaKnown RBP26.21■■□□□ 1.79
LIME1-203ENST00000465591 GCLCP48506 637 aaPredicted RBP26.21■■□□□ 1.79
LIME1-203ENST00000465591 USP17L2Q6R6M4 530 aa26.21■■□□□ 1.79
LIME1-203ENST00000465591 CABP5Q9NP86 173 aa26.21■■□□□ 1.79
LIME1-203ENST00000465591 MX1P20591 662 aa26.2■■□□□ 1.78
LIME1-203ENST00000465591 IRX3P78415 501 aaPredicted RBP26.2■■□□□ 1.78
LIME1-203ENST00000465591 POTEEQ6S8J3 1075 aa26.2■■□□□ 1.78
LIME1-203ENST00000465591 NBPF11Q86T75 865 aa26.2■■□□□ 1.78
LIME1-203ENST00000465591 RAET1EQ8TD07 263 aa26.2■■□□□ 1.78
LIME1-203ENST00000465591 APPBP2Q92624 585 aa26.2■■□□□ 1.78
LIME1-203ENST00000465591 C12orf42Q96LP6 360 aa26.2■■□□□ 1.78
LIME1-203ENST00000465591 FEZ1Q99689 392 aa26.2■■□□□ 1.78
LIME1-203ENST00000465591 M0R2C6 588 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms