RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 CST3P01034 146 aaPredicted RBP9.55□□□□□ -0.88
SMC4-205ENST00000465563 LIG3P49916 1009 aa9.55□□□□□ -0.88
SMC4-205ENST00000465563 MAP3K11Q16584 847 aa9.55□□□□□ -0.88
SMC4-205ENST00000465563 PRAMEF13Q5VWM6 474 aa9.55□□□□□ -0.88
SMC4-205ENST00000465563 LETMD1Q6P1Q0 360 aa9.55□□□□□ -0.88
SMC4-205ENST00000465563 HSPA12BQ96MM6 686 aa9.55□□□□□ -0.88
SMC4-205ENST00000465563 RNF19AQ9NV58 838 aa9.55□□□□□ -0.88
SMC4-205ENST00000465563 CNTNAP4Q9C0A0 1308 aa9.55□□□□□ -0.88
SMC4-205ENST00000465563 FARP2O94887 1054 aaPredicted RBP9.54□□□□□ -0.88
SMC4-205ENST00000465563 CDKAL1Q5VV42 579 aa9.54□□□□□ -0.88
SMC4-205ENST00000465563 SND1Q7KZF4 910 aaKnown RBP eCLIP9.54□□□□□ -0.88
SMC4-205ENST00000465563 RIN3Q8TB24 985 aa9.54□□□□□ -0.88
SMC4-205ENST00000465563 MIR1-1HGQ9H1L0 117 aa9.54□□□□□ -0.88
SMC4-205ENST00000465563 SEMA3GQ9NS98 782 aa9.54□□□□□ -0.88
SMC4-205ENST00000465563 JAG1P78504 1218 aa9.53□□□□□ -0.88
SMC4-205ENST00000465563 ZSWIM9Q86XI8 627 aa9.53□□□□□ -0.88
SMC4-205ENST00000465563 CARS2Q9HA77 564 aaKnown RBP9.53□□□□□ -0.88
SMC4-205ENST00000465563 ATP13A1Q9HD20 1204 aa9.53□□□□□ -0.88
SMC4-205ENST00000465563 CTNND2Q9UQB3 1225 aa9.53□□□□□ -0.88
SMC4-205ENST00000465563 CAPN6Q9Y6Q1 641 aa9.53□□□□□ -0.88
SMC4-205ENST00000465563 RLBP1P12271 317 aa9.52□□□□□ -0.89
SMC4-205ENST00000465563 CYP7A1P22680 504 aa9.52□□□□□ -0.89
SMC4-205ENST00000465563 XAGE3Q8WTP9 111 aa9.52□□□□□ -0.89
SMC4-205ENST00000465563 COX4I2Q96KJ9 171 aa9.52□□□□□ -0.89
SMC4-205ENST00000465563 H3BS24 57 aa9.51□□□□□ -0.89
SMC4-205ENST00000465563 CBX7O95931 251 aa9.51□□□□□ -0.89
SMC4-205ENST00000465563 AFMP43652 599 aa9.51□□□□□ -0.89
SMC4-205ENST00000465563 KCNMB1Q16558 191 aa9.51□□□□□ -0.89
SMC4-205ENST00000465563 MEI1Q5TIA1 1274 aa9.51□□□□□ -0.89
SMC4-205ENST00000465563 NPAS4Q8IUM7 802 aa9.51□□□□□ -0.89
SMC4-205ENST00000465563 PARP2Q9UGN5 583 aa9.51□□□□□ -0.89
SMC4-205ENST00000465563 ST14Q9Y5Y6 855 aa9.51□□□□□ -0.89
SMC4-205ENST00000465563 PGRP06401 933 aa9.5□□□□□ -0.89
SMC4-205ENST00000465563 TFE3P19532 575 aaPredicted RBP9.5□□□□□ -0.89
SMC4-205ENST00000465563 TSNAXIP1Q2TAA8 658 aa9.5□□□□□ -0.89
SMC4-205ENST00000465563 MRPL41Q8IXM3 137 aaKnown RBP9.5□□□□□ -0.89
SMC4-205ENST00000465563 FAM53CQ9NYF3 392 aa9.5□□□□□ -0.89
SMC4-205ENST00000465563 KRTAP4-8A0A0G2JLE6 195 aa9.49□□□□□ -0.89
SMC4-205ENST00000465563 KIR3DL1P43629 444 aa9.49□□□□□ -0.89
SMC4-205ENST00000465563 PDE4BQ07343 736 aa9.49□□□□□ -0.89
SMC4-205ENST00000465563 PSMD2Q13200 908 aa9.49□□□□□ -0.89
SMC4-205ENST00000465563 TAF1CQ15572 869 aaPredicted RBP9.49□□□□□ -0.89
SMC4-205ENST00000465563 DIEXFQ68CQ4 756 aaKnown RBP9.49□□□□□ -0.89
SMC4-205ENST00000465563 SLC6A19Q695T7 634 aa9.49□□□□□ -0.89
SMC4-205ENST00000465563 THAP5Q7Z6K1 395 aa9.49□□□□□ -0.89
SMC4-205ENST00000465563 CDH24Q86UP0 819 aa9.49□□□□□ -0.89
SMC4-205ENST00000465563 AEBP1Q8IUX7 1158 aa9.49□□□□□ -0.89
SMC4-205ENST00000465563 KSR1Q8IVT5 923 aa9.49□□□□□ -0.89
SMC4-205ENST00000465563 NOC4LQ9BVI4 516 aaKnown RBP9.49□□□□□ -0.89
SMC4-205ENST00000465563 TJP2Q9UDY2 1190 aa9.49□□□□□ -0.89
SMC4-205ENST00000465563 LRRC10BA6NIK2 292 aa9.48□□□□□ -0.89
SMC4-205ENST00000465563 DAB2P98082 770 aa9.48□□□□□ -0.89
SMC4-205ENST00000465563 RPL6Q02878 288 aaKnown RBP9.48□□□□□ -0.89
SMC4-205ENST00000465563 ZNF124Q15973 351 aa9.48□□□□□ -0.89
SMC4-205ENST00000465563 PKN1Q16512 942 aa9.48□□□□□ -0.89
SMC4-205ENST00000465563 TMEM87BQ96K49 555 aa9.48□□□□□ -0.89
SMC4-205ENST00000465563 SLC38A3Q99624 504 aa9.48□□□□□ -0.89
SMC4-205ENST00000465563 DPH2Q9BQC3 489 aaPredicted RBP9.48□□□□□ -0.89
SMC4-205ENST00000465563 ST13P50502 369 aaKnown RBP9.47□□□□□ -0.89
SMC4-205ENST00000465563 JARID2Q92833 1246 aaPredicted RBP9.47□□□□□ -0.89
SMC4-205ENST00000465563 UBE2FQ969M7 185 aa9.47□□□□□ -0.89
SMC4-205ENST00000465563 ZNF503-AS2A6NEH8 195 aa9.46□□□□□ -0.9
SMC4-205ENST00000465563 XPCQ01831 940 aaPredicted RBP9.46□□□□□ -0.9
SMC4-205ENST00000465563 FYB2Q5VWT5 728 aa9.46□□□□□ -0.9
SMC4-205ENST00000465563 CCDC120Q96HB5 630 aa9.46□□□□□ -0.9
SMC4-205ENST00000465563 FAM84AQ96KN4 292 aa9.46□□□□□ -0.9
SMC4-205ENST00000465563 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.46□□□□□ -0.9
SMC4-205ENST00000465563 ZSWIM5Q9P217 1185 aa9.46□□□□□ -0.9
SMC4-205ENST00000465563 ADAM30Q9UKF2 790 aa9.46□□□□□ -0.9
SMC4-205ENST00000465563 TLR6Q9Y2C9 796 aa9.46□□□□□ -0.9
SMC4-205ENST00000465563 GDNFP39905 211 aa9.45□□□□□ -0.9
SMC4-205ENST00000465563 ETV3P41162 512 aa9.45□□□□□ -0.9
SMC4-205ENST00000465563 TNK2Q07912 1038 aa9.45□□□□□ -0.9
SMC4-205ENST00000465563 MLANAQ16655 118 aa9.45□□□□□ -0.9
SMC4-205ENST00000465563 MCATQ8IVS2 390 aaKnown RBP9.45□□□□□ -0.9
SMC4-205ENST00000465563 PHC3Q8NDX5 983 aa9.45□□□□□ -0.9
SMC4-205ENST00000465563 PIWIL2Q8TC59 973 aaKnown RBP9.45□□□□□ -0.9
SMC4-205ENST00000465563 KIRREL1Q96J84 757 aa9.45□□□□□ -0.9
SMC4-205ENST00000465563 ARID1BQ8NFD5 2236 aaPredicted RBP9.44□□□□□ -0.9
SMC4-205ENST00000465563 DBX1A6NMT0 343 aa9.44□□□□□ -0.9
SMC4-205ENST00000465563 MESP2Q0VG99 397 aa9.44□□□□□ -0.9
SMC4-205ENST00000465563 TMC4Q7Z404 712 aa9.44□□□□□ -0.9
SMC4-205ENST00000465563 CCDC84Q86UT8 332 aaPredicted RBP9.44□□□□□ -0.9
SMC4-205ENST00000465563 LIN37Q96GY3 246 aaPredicted RBP9.44□□□□□ -0.9
SMC4-205ENST00000465563 USP31Q70CQ4 1352 aa9.44□□□□□ -0.9
SMC4-205ENST00000465563 GLI1P08151 1106 aa9.43□□□□□ -0.9
SMC4-205ENST00000465563 PDIA4P13667 645 aaKnown RBP9.43□□□□□ -0.9
SMC4-205ENST00000465563 TMEM67Q5HYA8 995 aa9.43□□□□□ -0.9
SMC4-205ENST00000465563 DNAJC14Q6Y2X3 702 aaPredicted RBP9.43□□□□□ -0.9
SMC4-205ENST00000465563 ACSF2Q96CM8 615 aaPredicted RBP9.43□□□□□ -0.9
SMC4-205ENST00000465563 ALPK1Q96QP1 1244 aa9.43□□□□□ -0.9
SMC4-205ENST00000465563 C19orf73Q9NVV2 129 aa9.43□□□□□ -0.9
SMC4-205ENST00000465563 CTSHP09668 335 aa9.42□□□□□ -0.9
SMC4-205ENST00000465563 TMPRSS7Q7RTY8 843 aa9.42□□□□□ -0.9
SMC4-205ENST00000465563 DNAJB8Q8NHS0 232 aa9.42□□□□□ -0.9
SMC4-205ENST00000465563 FAM161BQ96MY7 647 aa9.42□□□□□ -0.9
SMC4-205ENST00000465563 CEP131Q9UPN4 1083 aa9.42□□□□□ -0.9
SMC4-205ENST00000465563 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.41□□□□□ -0.9
SMC4-205ENST00000465563 MPZL3Q6UWV2 235 aa9.41□□□□□ -0.9
SMC4-205ENST00000465563 BHLHE22Q8NFJ8 381 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms