RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 MIPEPQ99797 713 aa5.35□□□□□ -1.55
SNX4-202ENST00000465505 ATP13A1Q9HD20 1204 aa5.35□□□□□ -1.55
SNX4-202ENST00000465505 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.35□□□□□ -1.55
SNX4-202ENST00000465505 TPX2Q9ULW0 747 aaKnown RBP5.35□□□□□ -1.55
SNX4-202ENST00000465505 ST14Q9Y5Y6 855 aa5.35□□□□□ -1.55
SNX4-202ENST00000465505 FAM155AB1AL88 458 aaPredicted RBP5.34□□□□□ -1.55
SNX4-202ENST00000465505 CST3P01034 146 aaPredicted RBP5.34□□□□□ -1.55
SNX4-202ENST00000465505 GRK4P32298 578 aa5.34□□□□□ -1.55
SNX4-202ENST00000465505 MESP2Q0VG99 397 aa5.34□□□□□ -1.55
SNX4-202ENST00000465505 CCDC85BQ15834 202 aaPredicted RBP5.34□□□□□ -1.55
SNX4-202ENST00000465505 CDKAL1Q5VV42 579 aa5.34□□□□□ -1.55
SNX4-202ENST00000465505 FYB2Q5VWT5 728 aa5.34□□□□□ -1.55
SNX4-202ENST00000465505 LETMD1Q6P1Q0 360 aa5.34□□□□□ -1.55
SNX4-202ENST00000465505 AGMOQ6ZNB7 445 aa5.34□□□□□ -1.55
SNX4-202ENST00000465505 ZSWIM9Q86XI8 627 aa5.34□□□□□ -1.55
SNX4-202ENST00000465505 MFSD4AQ8N468 514 aa5.34□□□□□ -1.55
SNX4-202ENST00000465505 DUSP9Q99956 384 aaKnown RBP5.34□□□□□ -1.55
SNX4-202ENST00000465505 CARS2Q9HA77 564 aaKnown RBP5.34□□□□□ -1.55
SNX4-202ENST00000465505 CAPN6Q9Y6Q1 641 aa5.34□□□□□ -1.55
SNX4-202ENST00000465505 EIF5BO60841 1220 aaKnown RBP5.33□□□□□ -1.56
SNX4-202ENST00000465505 FGD1P98174 961 aa5.33□□□□□ -1.56
SNX4-202ENST00000465505 SEPT6Q14141 434 aa5.33□□□□□ -1.56
SNX4-202ENST00000465505 PRAMEF13Q5VWM6 474 aa5.33□□□□□ -1.56
SNX4-202ENST00000465505 NPAS4Q8IUM7 802 aa5.33□□□□□ -1.56
SNX4-202ENST00000465505 C19orf73Q9NVV2 129 aa5.33□□□□□ -1.56
SNX4-202ENST00000465505 FAM53CQ9NYF3 392 aa5.33□□□□□ -1.56
SNX4-202ENST00000465505 TACC3Q9Y6A5 838 aa5.33□□□□□ -1.56
SNX4-202ENST00000465505 ANKRD33BA6NCL7 494 aa5.32□□□□□ -1.56
SNX4-202ENST00000465505 DBX1A6NMT0 343 aa5.32□□□□□ -1.56
SNX4-202ENST00000465505 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.32□□□□□ -1.56
SNX4-202ENST00000465505 H3BS24 57 aa5.32□□□□□ -1.56
SNX4-202ENST00000465505 AFMP43652 599 aa5.32□□□□□ -1.56
SNX4-202ENST00000465505 LIG3P49916 1009 aa5.32□□□□□ -1.56
SNX4-202ENST00000465505 KCNMB1Q16558 191 aa5.32□□□□□ -1.56
SNX4-202ENST00000465505 LCE1DQ5T752 114 aa5.32□□□□□ -1.56
SNX4-202ENST00000465505 CDH24Q86UP0 819 aa5.32□□□□□ -1.56
SNX4-202ENST00000465505 XAGE3Q8WTP9 111 aa5.32□□□□□ -1.56
SNX4-202ENST00000465505 FAM84AQ96KN4 292 aa5.32□□□□□ -1.56
SNX4-202ENST00000465505 TJP2Q9UDY2 1190 aa5.32□□□□□ -1.56
SNX4-202ENST00000465505 LRRC10BA6NIK2 292 aa5.31□□□□□ -1.56
SNX4-202ENST00000465505 PATL2C9JE40 543 aaKnown RBP5.31□□□□□ -1.56
SNX4-202ENST00000465505 CBX7O95931 251 aa5.31□□□□□ -1.56
SNX4-202ENST00000465505 TFE3P19532 575 aaPredicted RBP5.31□□□□□ -1.56
SNX4-202ENST00000465505 MAP3K11Q16584 847 aa5.31□□□□□ -1.56
SNX4-202ENST00000465505 EAPPQ56P03 285 aaPredicted RBP5.31□□□□□ -1.56
SNX4-202ENST00000465505 MEI1Q5TIA1 1274 aa5.31□□□□□ -1.56
SNX4-202ENST00000465505 ZNF746Q6NUN9 644 aaPredicted RBP5.31□□□□□ -1.56
SNX4-202ENST00000465505 THAP5Q7Z6K1 395 aa5.31□□□□□ -1.56
SNX4-202ENST00000465505 KSR1Q8IVT5 923 aa5.31□□□□□ -1.56
SNX4-202ENST00000465505 MRPL41Q8IXM3 137 aaKnown RBP5.31□□□□□ -1.56
SNX4-202ENST00000465505 UBE2FQ969M7 185 aa5.31□□□□□ -1.56
SNX4-202ENST00000465505 LIN37Q96GY3 246 aaPredicted RBP5.31□□□□□ -1.56
SNX4-202ENST00000465505 PGRP06401 933 aa5.3□□□□□ -1.56
SNX4-202ENST00000465505 LMNB1P20700 586 aa5.3□□□□□ -1.56
SNX4-202ENST00000465505 CYP7A1P22680 504 aa5.3□□□□□ -1.56
SNX4-202ENST00000465505 GDNFP39905 211 aa5.3□□□□□ -1.56
SNX4-202ENST00000465505 KIR3DL1P43629 444 aa5.3□□□□□ -1.56
SNX4-202ENST00000465505 TNK2Q07912 1038 aa5.3□□□□□ -1.56
SNX4-202ENST00000465505 MLANAQ16655 118 aa5.3□□□□□ -1.56
SNX4-202ENST00000465505 SLC6A19Q695T7 634 aa5.3□□□□□ -1.56
SNX4-202ENST00000465505 MCATQ8IVS2 390 aaKnown RBP5.3□□□□□ -1.56
SNX4-202ENST00000465505 TMEM87BQ96K49 555 aa5.3□□□□□ -1.56
SNX4-202ENST00000465505 COX4I2Q96KJ9 171 aa5.3□□□□□ -1.56
SNX4-202ENST00000465505 MIR1-1HGQ9H1L0 117 aa5.3□□□□□ -1.56
SNX4-202ENST00000465505 GLI1P08151 1106 aa5.29□□□□□ -1.56
SNX4-202ENST00000465505 RPL6Q02878 288 aaKnown RBP5.29□□□□□ -1.56
SNX4-202ENST00000465505 PKN1Q16512 942 aa5.29□□□□□ -1.56
SNX4-202ENST00000465505 TSNAXIP1Q2TAA8 658 aa5.29□□□□□ -1.56
SNX4-202ENST00000465505 BHLHE22Q8NFJ8 381 aaPredicted RBP5.29□□□□□ -1.56
SNX4-202ENST00000465505 KIRREL1Q96J84 757 aa5.29□□□□□ -1.56
SNX4-202ENST00000465505 SLC38A3Q99624 504 aa5.29□□□□□ -1.56
SNX4-202ENST00000465505 DPH2Q9BQC3 489 aaPredicted RBP5.29□□□□□ -1.56
SNX4-202ENST00000465505 ZSWIM5Q9P217 1185 aa5.29□□□□□ -1.56
SNX4-202ENST00000465505 PARP2Q9UGN5 583 aa5.29□□□□□ -1.56
SNX4-202ENST00000465505 TLR6Q9Y2C9 796 aa5.29□□□□□ -1.56
SNX4-202ENST00000465505 ESR1P03372 595 aa5.28□□□□□ -1.56
SNX4-202ENST00000465505 RLBP1P12271 317 aa5.28□□□□□ -1.56
SNX4-202ENST00000465505 DAB2P98082 770 aa5.28□□□□□ -1.56
SNX4-202ENST00000465505 PDE4BQ07343 736 aa5.28□□□□□ -1.56
SNX4-202ENST00000465505 TAF1CQ15572 869 aaPredicted RBP5.28□□□□□ -1.56
SNX4-202ENST00000465505 TMEM67Q5HYA8 995 aa5.28□□□□□ -1.56
SNX4-202ENST00000465505 PRR23BQ6ZRT6 265 aa5.28□□□□□ -1.56
SNX4-202ENST00000465505 CILP2Q8IUL8 1156 aa5.28□□□□□ -1.56
SNX4-202ENST00000465505 DNAJB8Q8NHS0 232 aa5.28□□□□□ -1.56
SNX4-202ENST00000465505 JARID2Q92833 1246 aaPredicted RBP5.28□□□□□ -1.56
SNX4-202ENST00000465505 ACSF2Q96CM8 615 aaPredicted RBP5.28□□□□□ -1.56
SNX4-202ENST00000465505 Q96M66 194 aa5.28□□□□□ -1.56
SNX4-202ENST00000465505 ALPK1Q96QP1 1244 aa5.28□□□□□ -1.56
SNX4-202ENST00000465505 NOC4LQ9BVI4 516 aaKnown RBP5.28□□□□□ -1.56
SNX4-202ENST00000465505 ADAM30Q9UKF2 790 aa5.28□□□□□ -1.56
SNX4-202ENST00000465505 CEP131Q9UPN4 1083 aa5.28□□□□□ -1.56
SNX4-202ENST00000465505 USP31Q70CQ4 1352 aa5.28□□□□□ -1.56
SNX4-202ENST00000465505 WASH4PA8MWX3 477 aa5.27□□□□□ -1.57
SNX4-202ENST00000465505 CTSHP09668 335 aa5.27□□□□□ -1.57
SNX4-202ENST00000465505 ST13P50502 369 aaKnown RBP5.27□□□□□ -1.57
SNX4-202ENST00000465505 SND1Q7KZF4 910 aaKnown RBP eCLIP5.27□□□□□ -1.57
SNX4-202ENST00000465505 PHC3Q8NDX5 983 aa5.27□□□□□ -1.57
SNX4-202ENST00000465505 PIWIL2Q8TC59 973 aaKnown RBP5.27□□□□□ -1.57
SNX4-202ENST00000465505 PPP1R13LQ8WUF5 828 aa5.27□□□□□ -1.57
SNX4-202ENST00000465505 CCDC120Q96HB5 630 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms