RNA–Protein interactions for RNA: ENST00000465352.1

ABCA4-203, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 1,048 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-203ENST00000465352 UBXN2AP68543 259 aa17.34■□□□□ 0.37
ABCA4-203ENST00000465352 IRX3P78415 501 aaPredicted RBP17.34■□□□□ 0.37
ABCA4-203ENST00000465352 FAM110CQ1W6H9 321 aa17.34■□□□□ 0.37
ABCA4-203ENST00000465352 ANKRD13CQ8N6S4 541 aa17.34■□□□□ 0.37
ABCA4-203ENST00000465352 COA7Q96BR5 231 aa17.34■□□□□ 0.37
ABCA4-203ENST00000465352 EHD4Q9H223 541 aa17.34■□□□□ 0.37
ABCA4-203ENST00000465352 DNAJC18Q9H819 358 aa17.34■□□□□ 0.37
ABCA4-203ENST00000465352 SERPINB13Q9UIV8 391 aa17.34■□□□□ 0.37
ABCA4-203ENST00000465352 MGAMO43451 1857 aa17.33■□□□□ 0.37
ABCA4-203ENST00000465352 GDF11O95390 407 aa17.33■□□□□ 0.36
ABCA4-203ENST00000465352 MYCP01106 439 aaPredicted RBP17.33■□□□□ 0.36
ABCA4-203ENST00000465352 POLR3DP05423 398 aaPredicted RBP17.33■□□□□ 0.36
ABCA4-203ENST00000465352 PDE6AP16499 860 aa17.33■□□□□ 0.36
ABCA4-203ENST00000465352 SLAIN1Q8ND83 568 aa17.33■□□□□ 0.36
ABCA4-203ENST00000465352 NKX2-3Q8TAU0 364 aa17.33■□□□□ 0.36
ABCA4-203ENST00000465352 LRRCC1Q9C099 1032 aa17.33■□□□□ 0.36
ABCA4-203ENST00000465352 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.33■□□□□ 0.36
ABCA4-203ENST00000465352 ZBTB21Q9ULJ3 1066 aa17.33■□□□□ 0.36
ABCA4-203ENST00000465352 SIPA1L1O43166 1804 aa17.33■□□□□ 0.36
ABCA4-203ENST00000465352 ATP5JP18859 108 aa17.32■□□□□ 0.36
ABCA4-203ENST00000465352 PRKCZQ05513 592 aa17.32■□□□□ 0.36
ABCA4-203ENST00000465352 MTMR2Q13614 643 aa17.32■□□□□ 0.36
ABCA4-203ENST00000465352 RIOK1Q9BRS2 568 aaKnown RBP17.32■□□□□ 0.36
ABCA4-203ENST00000465352 ASCC2Q9H1I8 757 aaPredicted RBP17.32■□□□□ 0.36
ABCA4-203ENST00000465352 BOLA2Q9H3K6 86 aa17.32■□□□□ 0.36
ABCA4-203ENST00000465352 CABP5Q9NP86 173 aa17.32■□□□□ 0.36
ABCA4-203ENST00000465352 PAG1Q9NWQ8 432 aa17.32■□□□□ 0.36
ABCA4-203ENST00000465352 ZNF532Q9HCE3 1301 aa17.31■□□□□ 0.36
ABCA4-203ENST00000465352 ADCY3O60266 1144 aa17.31■□□□□ 0.36
ABCA4-203ENST00000465352 HOXA7P31268 230 aaPredicted RBP17.31■□□□□ 0.36
ABCA4-203ENST00000465352 CERKLQ49MI3 558 aaPredicted RBP17.31■□□□□ 0.36
ABCA4-203ENST00000465352 C20orf194Q5TEA3 1177 aa17.31■□□□□ 0.36
ABCA4-203ENST00000465352 TATDN1Q6P1N9 297 aa17.31■□□□□ 0.36
ABCA4-203ENST00000465352 LOC285556D6RIA3 1793 aa17.3■□□□□ 0.36
ABCA4-203ENST00000465352 DOCK3Q8IZD9 2030 aa17.3■□□□□ 0.36
ABCA4-203ENST00000465352 GH2P01242 217 aa17.3■□□□□ 0.36
ABCA4-203ENST00000465352 FLT3LGP49771 235 aa17.3■□□□□ 0.36
ABCA4-203ENST00000465352 IRF5Q13568 498 aa17.3■□□□□ 0.36
ABCA4-203ENST00000465352 USP17L2Q6R6M4 530 aa17.3■□□□□ 0.36
ABCA4-203ENST00000465352 FEZ1Q99689 392 aa17.3■□□□□ 0.36
ABCA4-203ENST00000465352 MCM9Q9NXL9 1143 aa17.3■□□□□ 0.36
ABCA4-203ENST00000465352 GABRQQ9UN88 632 aa17.3■□□□□ 0.36
ABCA4-203ENST00000465352 USP14P54578 494 aa17.29■□□□□ 0.36
ABCA4-203ENST00000465352 JAG1P78504 1218 aa17.29■□□□□ 0.36
ABCA4-203ENST00000465352 ABCB5Q2M3G0 1257 aa17.29■□□□□ 0.36
ABCA4-203ENST00000465352 ZSCAN25Q6NSZ9 544 aa17.29■□□□□ 0.36
ABCA4-203ENST00000465352 PXYLP1Q8TE99 480 aa17.29■□□□□ 0.36
ABCA4-203ENST00000465352 GTF3C2Q8WUA4 911 aaPredicted RBP17.29■□□□□ 0.36
ABCA4-203ENST00000465352 HAUS7Q99871 368 aa17.29■□□□□ 0.36
ABCA4-203ENST00000465352 RNF208Q9H0X6 261 aa17.29■□□□□ 0.36
ABCA4-203ENST00000465352 TAOK2Q9UL54 1235 aa17.29■□□□□ 0.36
ABCA4-203ENST00000465352 CENPFP49454 3210 aa17.29■□□□□ 0.36
ABCA4-203ENST00000465352 GJB1P08034 283 aa17.28■□□□□ 0.36
ABCA4-203ENST00000465352 CCL5P13501 91 aa17.28■□□□□ 0.36
ABCA4-203ENST00000465352 CAPN2P17655 700 aa17.28■□□□□ 0.36
ABCA4-203ENST00000465352 RAB3GAP1Q15042 981 aa17.28■□□□□ 0.36
ABCA4-203ENST00000465352 MTFR1Q15390 333 aa17.28■□□□□ 0.36
ABCA4-203ENST00000465352 AMOTL1Q8IY63 956 aa17.28■□□□□ 0.36
ABCA4-203ENST00000465352 EDC3Q96F86 508 aaKnown RBP17.28■□□□□ 0.36
ABCA4-203ENST00000465352 DDRGK1Q96HY6 314 aa17.28■□□□□ 0.36
ABCA4-203ENST00000465352 GPATCH3Q96I76 525 aa17.28■□□□□ 0.36
ABCA4-203ENST00000465352 MORF4L1Q9UBU8 362 aa17.28■□□□□ 0.36
ABCA4-203ENST00000465352 CEP290O15078 2479 aa17.27■□□□□ 0.36
ABCA4-203ENST00000465352 TCRBV5S4A2TA0A5A2 114 aa17.27■□□□□ 0.36
ABCA4-203ENST00000465352 ADD2P35612 726 aa17.27■□□□□ 0.36
ABCA4-203ENST00000465352 PLCD1P51178 756 aa17.27■□□□□ 0.36
ABCA4-203ENST00000465352 CCAR1Q8IX12 1150 aaKnown RBP17.27■□□□□ 0.36
ABCA4-203ENST00000465352 GCC1Q96CN9 775 aa17.27■□□□□ 0.36
ABCA4-203ENST00000465352 P2RX7Q99572 595 aaKnown RBP17.27■□□□□ 0.36
ABCA4-203ENST00000465352 ATP8A2Q9NTI2 1148 aa17.27■□□□□ 0.36
ABCA4-203ENST00000465352 HERVK_113P62684 666 aa17.26■□□□□ 0.35
ABCA4-203ENST00000465352 UBE3CQ15386 1083 aa17.26■□□□□ 0.35
ABCA4-203ENST00000465352 SHROOM1Q2M3G4 852 aaPredicted RBP17.26■□□□□ 0.35
ABCA4-203ENST00000465352 LCORLQ8N3X6 602 aa17.26■□□□□ 0.35
ABCA4-203ENST00000465352 GPRC5AQ8NFJ5 357 aa17.26■□□□□ 0.35
ABCA4-203ENST00000465352 DCTPP1Q9H773 170 aa17.26■□□□□ 0.35
ABCA4-203ENST00000465352 ARMT1Q9H993 441 aa17.26■□□□□ 0.35
ABCA4-203ENST00000465352 DCP1AQ9NPI6 582 aaPredicted RBP17.26■□□□□ 0.35
ABCA4-203ENST00000465352 EMILIN3Q9NT22 766 aa17.26■□□□□ 0.35
ABCA4-203ENST00000465352 ECHDC1Q9NTX5 307 aa17.26■□□□□ 0.35
ABCA4-203ENST00000465352 SWAP70Q9UH65 585 aa17.26■□□□□ 0.35
ABCA4-203ENST00000465352 USP17L15C9J2P7 530 aa17.25■□□□□ 0.35
ABCA4-203ENST00000465352 USP17L13C9JLJ4 530 aa17.25■□□□□ 0.35
ABCA4-203ENST00000465352 USP17L11C9JVI0 530 aa17.25■□□□□ 0.35
ABCA4-203ENST00000465352 USP17L18D6R9N7 530 aa17.25■□□□□ 0.35
ABCA4-203ENST00000465352 USP17L22D6RA61 530 aa17.25■□□□□ 0.35
ABCA4-203ENST00000465352 USP17L17D6RBQ6 530 aa17.25■□□□□ 0.35
ABCA4-203ENST00000465352 USP17L19D6RCP7 530 aa17.25■□□□□ 0.35
ABCA4-203ENST00000465352 USP17L20D6RJB6 530 aa17.25■□□□□ 0.35
ABCA4-203ENST00000465352 SMARCA5O60264 1052 aaPredicted RBP17.25■□□□□ 0.35
ABCA4-203ENST00000465352 MBD4O95243 580 aa17.25■□□□□ 0.35
ABCA4-203ENST00000465352 SHMT1P34896 483 aa17.25■□□□□ 0.35
ABCA4-203ENST00000465352 GJA8P48165 433 aa17.25■□□□□ 0.35
ABCA4-203ENST00000465352 USP17L24Q0WX57 530 aa17.25■□□□□ 0.35
ABCA4-203ENST00000465352 SDR42E1Q8WUS8 393 aa17.25■□□□□ 0.35
ABCA4-203ENST00000465352 C12orf42Q96LP6 360 aa17.25■□□□□ 0.35
ABCA4-203ENST00000465352 KIAA1683Q9H0B3 1180 aa17.25■□□□□ 0.35
ABCA4-203ENST00000465352 NAV1Q8NEY1 1877 aa17.24■□□□□ 0.35
ABCA4-203ENST00000465352 MPHOSPH10O00566 681 aaKnown RBP17.24■□□□□ 0.35
ABCA4-203ENST00000465352 INHAP05111 366 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms