RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	EAF1	Q96JC9	268 aa	Predicted RBP	7.81	□□□□□ -1.16
CACNA1C-223	ENST00000465278	WDR18	Q9BV38	432 aa		7.81	□□□□□ -1.16
CACNA1C-223	ENST00000465278	KRT82	Q9NSB4	513 aa		7.81	□□□□□ -1.16
CACNA1C-223	ENST00000465278	UBP1	Q9NZI7	540 aa		7.81	□□□□□ -1.16
CACNA1C-223	ENST00000465278	PPP1R9A	Q9ULJ8	1098 aa		7.81	□□□□□ -1.16
CACNA1C-223	ENST00000465278	INPP5F	Q9Y2H2	1132 aa		7.81	□□□□□ -1.16
CACNA1C-223	ENST00000465278	KIF14	Q15058	1648 aa		7.81	□□□□□ -1.16
CACNA1C-223	ENST00000465278	SPATA31A6	Q5VVP1	1343 aa		7.8	□□□□□ -1.16
CACNA1C-223	ENST00000465278	MEGF11	A6BM72	1044 aa		7.8	□□□□□ -1.16
CACNA1C-223	ENST00000465278	GREM1	O60565	184 aa		7.8	□□□□□ -1.16
CACNA1C-223	ENST00000465278	MEX3C	Q5U5Q3	659 aa	Known RBP	7.8	□□□□□ -1.16
CACNA1C-223	ENST00000465278	WFDC12	Q8WWY7	111 aa		7.8	□□□□□ -1.16
CACNA1C-223	ENST00000465278	RNF208	Q9H0X6	261 aa		7.8	□□□□□ -1.16
CACNA1C-223	ENST00000465278	CACNA2D2	Q9NY47	1150 aa		7.8	□□□□□ -1.16
CACNA1C-223	ENST00000465278	SUPT16H	Q9Y5B9	1047 aa	Known RBP	7.8	□□□□□ -1.16
CACNA1C-223	ENST00000465278	DIP2C	Q9Y2E4	1556 aa		7.8	□□□□□ -1.16
CACNA1C-223	ENST00000465278	ZC3H13	Q5T200	1668 aa	Known RBP	7.79	□□□□□ -1.16
CACNA1C-223	ENST00000465278	FGD6	Q6ZV73	1430 aa		7.79	□□□□□ -1.16
CACNA1C-223	ENST00000465278	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	7.79	□□□□□ -1.16
CACNA1C-223	ENST00000465278	FAM221A	A4D161	298 aa		7.79	□□□□□ -1.16
CACNA1C-223	ENST00000465278	GLB1	P16278	677 aa		7.79	□□□□□ -1.16
CACNA1C-223	ENST00000465278	NOS3	P29474	1203 aa		7.79	□□□□□ -1.16
CACNA1C-223	ENST00000465278	GATAD2B	Q8WXI9	593 aa		7.79	□□□□□ -1.16
CACNA1C-223	ENST00000465278	DCAF5	Q96JK2	942 aa		7.79	□□□□□ -1.16
CACNA1C-223	ENST00000465278	NACC1	Q96RE7	527 aa		7.79	□□□□□ -1.16
CACNA1C-223	ENST00000465278	CYP4F12	Q9HCS2	524 aa		7.79	□□□□□ -1.16
CACNA1C-223	ENST00000465278	LRRC9	Q6ZRR7	1453 aa		7.79	□□□□□ -1.16
CACNA1C-223	ENST00000465278	ITSN2	Q9NZM3	1697 aa		7.79	□□□□□ -1.16
CACNA1C-223	ENST00000465278	UGGT2	Q9NYU1	1516 aa		7.78	□□□□□ -1.16
CACNA1C-223	ENST00000465278	CRK	P46108	304 aa		7.78	□□□□□ -1.16
CACNA1C-223	ENST00000465278	NRG1	Q02297	640 aa	Predicted RBP	7.78	□□□□□ -1.16
CACNA1C-223	ENST00000465278	RASSF7	Q02833	373 aa		7.78	□□□□□ -1.16
CACNA1C-223	ENST00000465278	KIF4B	Q2VIQ3	1234 aa		7.78	□□□□□ -1.16
CACNA1C-223	ENST00000465278	NAALADL2	Q58DX5	795 aa		7.78	□□□□□ -1.16
CACNA1C-223	ENST00000465278	LRFN4	Q6PJG9	635 aa		7.78	□□□□□ -1.16
CACNA1C-223	ENST00000465278	FAM196A	Q6ZSG2	479 aa		7.78	□□□□□ -1.16
CACNA1C-223	ENST00000465278	DYM	Q7RTS9	669 aa		7.78	□□□□□ -1.16
CACNA1C-223	ENST00000465278	MED14	O60244	1454 aa		7.78	□□□□□ -1.16
CACNA1C-223	ENST00000465278	CLTC	Q00610	1675 aa	Known RBP	7.77	□□□□□ -1.17
CACNA1C-223	ENST00000465278	A2ML1	A8K2U0	1454 aa		7.77	□□□□□ -1.17
CACNA1C-223	ENST00000465278	C1QTNF9B	B2RNN3	333 aa		7.77	□□□□□ -1.17
CACNA1C-223	ENST00000465278	CILP	O75339	1184 aa		7.77	□□□□□ -1.17
CACNA1C-223	ENST00000465278	CHRNA4	P43681	627 aa		7.77	□□□□□ -1.17
CACNA1C-223	ENST00000465278	ZC3H6	P61129	1189 aa	Known RBP	7.77	□□□□□ -1.17
CACNA1C-223	ENST00000465278	RBM6	P78332	1123 aa	Known RBP	7.77	□□□□□ -1.17
CACNA1C-223	ENST00000465278	SOX4	Q06945	474 aa	Predicted RBP	7.77	□□□□□ -1.17
CACNA1C-223	ENST00000465278	SEZ6	Q53EL9	994 aa		7.77	□□□□□ -1.17
CACNA1C-223	ENST00000465278	ZC3H12A	Q5D1E8	599 aa	Known RBP	7.77	□□□□□ -1.17
CACNA1C-223	ENST00000465278	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	7.77	□□□□□ -1.17
CACNA1C-223	ENST00000465278	FDX2	Q6P4F2	183 aa		7.77	□□□□□ -1.17
CACNA1C-223	ENST00000465278	CCDC84	Q86UT8	332 aa	Predicted RBP	7.77	□□□□□ -1.17
CACNA1C-223	ENST00000465278	CD163	Q86VB7	1156 aa		7.77	□□□□□ -1.17
CACNA1C-223	ENST00000465278	SMG8	Q8ND04	991 aa	Known RBP	7.77	□□□□□ -1.17
CACNA1C-223	ENST00000465278	NKD1	Q969G9	470 aa		7.77	□□□□□ -1.17
CACNA1C-223	ENST00000465278	ELMO3	Q96BJ8	720 aa		7.77	□□□□□ -1.17
CACNA1C-223	ENST00000465278	PLPPR2	Q96GM1	343 aa		7.77	□□□□□ -1.17
CACNA1C-223	ENST00000465278	UBL7	Q96S82	380 aa	Predicted RBP	7.77	□□□□□ -1.17
CACNA1C-223	ENST00000465278	NT5C1A	Q9BXI3	368 aa		7.77	□□□□□ -1.17
CACNA1C-223	ENST00000465278	AP4E1	Q9UPM8	1137 aa		7.77	□□□□□ -1.17
CACNA1C-223	ENST00000465278	ABCA6	Q8N139	1617 aa		7.77	□□□□□ -1.17
CACNA1C-223	ENST00000465278	SART1	O43290	800 aa	Known RBP	7.76	□□□□□ -1.17
CACNA1C-223	ENST00000465278	BPNT1	O95861	308 aa		7.76	□□□□□ -1.17
CACNA1C-223	ENST00000465278	MCM4	P33991	863 aa		7.76	□□□□□ -1.17
CACNA1C-223	ENST00000465278	RPL6	Q02878	288 aa	Known RBP	7.76	□□□□□ -1.17
CACNA1C-223	ENST00000465278	APOBR	Q0VD83	1088 aa		7.76	□□□□□ -1.17
CACNA1C-223	ENST00000465278	ADGRE1	Q14246	886 aa		7.76	□□□□□ -1.17
CACNA1C-223	ENST00000465278	MBTPS1	Q14703	1052 aa		7.76	□□□□□ -1.17
CACNA1C-223	ENST00000465278	PPM1J	Q5JR12	505 aa		7.76	□□□□□ -1.17
CACNA1C-223	ENST00000465278	SCARA3	Q6AZY7	606 aa		7.76	□□□□□ -1.17
CACNA1C-223	ENST00000465278	HDX	Q7Z353	690 aa		7.76	□□□□□ -1.17
CACNA1C-223	ENST00000465278	SUGCT	Q9HAC7	445 aa		7.76	□□□□□ -1.17
CACNA1C-223	ENST00000465278	KCNQ5	Q9NR82	932 aa		7.76	□□□□□ -1.17
CACNA1C-223	ENST00000465278	HIF3A	Q9Y2N7	669 aa		7.76	□□□□□ -1.17
CACNA1C-223	ENST00000465278	ATP10B	O94823	1461 aa		7.75	□□□□□ -1.17
CACNA1C-223	ENST00000465278	RNF225	M0QZC1	329 aa	Predicted RBP	7.75	□□□□□ -1.17
CACNA1C-223	ENST00000465278	GFRA2	O00451	464 aa		7.75	□□□□□ -1.17
CACNA1C-223	ENST00000465278	TMPRSS2	O15393	492 aa		7.75	□□□□□ -1.17
CACNA1C-223	ENST00000465278	GRIN3B	O60391	1043 aa		7.75	□□□□□ -1.17
CACNA1C-223	ENST00000465278	ID3	Q02535	119 aa		7.75	□□□□□ -1.17
CACNA1C-223	ENST00000465278	WIPI1	Q5MNZ9	446 aa	Predicted RBP	7.75	□□□□□ -1.17
CACNA1C-223	ENST00000465278	DIEXF	Q68CQ4	756 aa	Known RBP	7.75	□□□□□ -1.17
CACNA1C-223	ENST00000465278	GPRASP2	Q96D09	838 aa		7.75	□□□□□ -1.17
CACNA1C-223	ENST00000465278	BRMS1	Q9HCU9	246 aa		7.75	□□□□□ -1.17
CACNA1C-223	ENST00000465278	PICK1	Q9NRD5	415 aa		7.75	□□□□□ -1.17
CACNA1C-223	ENST00000465278	DISC1	Q9NRI5	854 aa		7.75	□□□□□ -1.17
CACNA1C-223	ENST00000465278	CRIM1	Q9NZV1	1036 aa		7.75	□□□□□ -1.17
CACNA1C-223	ENST00000465278	PCDHGC5	Q9Y5F6	944 aa		7.75	□□□□□ -1.17
CACNA1C-223	ENST00000465278	BLM	P54132	1417 aa	Predicted RBP	7.75	□□□□□ -1.17
CACNA1C-223	ENST00000465278	SCAF11	Q99590	1463 aa	Known RBP	7.75	□□□□□ -1.17
CACNA1C-223	ENST00000465278	ROBO2	Q9HCK4	1378 aa		7.74	□□□□□ -1.17
CACNA1C-223	ENST00000465278	ADH5	P11766	374 aa		7.74	□□□□□ -1.17
CACNA1C-223	ENST00000465278	ASPA	P45381	313 aa		7.74	□□□□□ -1.17
CACNA1C-223	ENST00000465278	PREP	P48147	710 aa		7.74	□□□□□ -1.17
CACNA1C-223	ENST00000465278	GSK3A	P49840	483 aa		7.74	□□□□□ -1.17
CACNA1C-223	ENST00000465278	USP11	P51784	963 aa		7.74	□□□□□ -1.17
CACNA1C-223	ENST00000465278	KCNMA1	Q12791	1236 aa		7.74	□□□□□ -1.17
CACNA1C-223	ENST00000465278	ANKRD34A	Q69YU3	496 aa		7.74	□□□□□ -1.17
CACNA1C-223	ENST00000465278	ALYREF	Q86V81	257 aa	Known RBP	7.74	□□□□□ -1.17
CACNA1C-223	ENST00000465278	C2CD4A	Q8NCU7	369 aa	Predicted RBP	7.74	□□□□□ -1.17
CACNA1C-223	ENST00000465278	MEGF10	Q96KG7	1140 aa		7.74	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms