RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 ARHGEF6Q15052 776 aa14.7□□□□□ -0.06
XRN1-204ENST00000465074 B4GALNT3Q6L9W6 998 aa14.7□□□□□ -0.06
XRN1-204ENST00000465074 PARK7Q99497 189 aaKnown RBP14.7□□□□□ -0.06
XRN1-204ENST00000465074 BAZ2AQ9UIF9 1905 aaKnown RBP14.7□□□□□ -0.06
XRN1-204ENST00000465074 MPHOSPH10O00566 681 aaKnown RBP14.69□□□□□ -0.06
XRN1-204ENST00000465074 ERC2O15083 957 aa14.69□□□□□ -0.06
XRN1-204ENST00000465074 GH2P01242 217 aa14.69□□□□□ -0.06
XRN1-204ENST00000465074 CAP1Q01518 475 aa14.69□□□□□ -0.06
XRN1-204ENST00000465074 EVX2Q03828 476 aa14.69□□□□□ -0.06
XRN1-204ENST00000465074 MTMR2Q13614 643 aa14.69□□□□□ -0.06
XRN1-204ENST00000465074 RAB3GAP1Q15042 981 aa14.69□□□□□ -0.06
XRN1-204ENST00000465074 CERKLQ49MI3 558 aaPredicted RBP14.69□□□□□ -0.06
XRN1-204ENST00000465074 TREML2Q5T2D2 321 aa14.69□□□□□ -0.06
XRN1-204ENST00000465074 SMCR8Q8TEV9 937 aaPredicted RBP14.69□□□□□ -0.06
XRN1-204ENST00000465074 DDRGK1Q96HY6 314 aa14.69□□□□□ -0.06
XRN1-204ENST00000465074 ARHGAP39Q9C0H5 1083 aa14.69□□□□□ -0.06
XRN1-204ENST00000465074 ZBTB21Q9ULJ3 1066 aa14.69□□□□□ -0.06
XRN1-204ENST00000465074 SLC4A4Q9Y6R1 1079 aa14.69□□□□□ -0.06
XRN1-204ENST00000465074 FMNL1O95466 1100 aaPredicted RBP14.68□□□□□ -0.06
XRN1-204ENST00000465074 MX1P20591 662 aa14.68□□□□□ -0.06
XRN1-204ENST00000465074 LACTBP83111 547 aaPredicted RBP14.68□□□□□ -0.06
XRN1-204ENST00000465074 UBE3CQ15386 1083 aa14.68□□□□□ -0.06
XRN1-204ENST00000465074 ZYXQ15942 572 aaKnown RBP14.68□□□□□ -0.06
XRN1-204ENST00000465074 C17orf99Q6UX52 265 aa14.68□□□□□ -0.06
XRN1-204ENST00000465074 METTL16Q86W50 562 aaKnown RBP14.68□□□□□ -0.06
XRN1-204ENST00000465074 AMOTL1Q8IY63 956 aa14.68□□□□□ -0.06
XRN1-204ENST00000465074 KBTBD3Q8NAB2 608 aa14.68□□□□□ -0.06
XRN1-204ENST00000465074 GCC1Q96CN9 775 aa14.68□□□□□ -0.06
XRN1-204ENST00000465074 PUS7LQ9H0K6 701 aaKnown RBP14.68□□□□□ -0.06
XRN1-204ENST00000465074 RWDD1Q9H446 243 aaPredicted RBP14.68□□□□□ -0.06
XRN1-204ENST00000465074 DCP1AQ9NPI6 582 aaPredicted RBP14.68□□□□□ -0.06
XRN1-204ENST00000465074 TMOD4Q9NZQ9 345 aa14.68□□□□□ -0.06
XRN1-204ENST00000465074 AGTPBP1Q9UPW5 1226 aa14.68□□□□□ -0.06
XRN1-204ENST00000465074 PTPN22Q9Y2R2 807 aa14.68□□□□□ -0.06
XRN1-204ENST00000465074 TTC41PQ6P2S7 1318 aa14.67□□□□□ -0.06
XRN1-204ENST00000465074 MYH8P13535 1937 aa14.67□□□□□ -0.06
XRN1-204ENST00000465074 CYP2D7A0A087X1C5 515 aa14.67□□□□□ -0.06
XRN1-204ENST00000465074 MYCP01106 439 aaPredicted RBP14.67□□□□□ -0.06
XRN1-204ENST00000465074 PSMC4P43686 418 aa14.67□□□□□ -0.06
XRN1-204ENST00000465074 HDAC1Q13547 482 aaPredicted RBP14.67□□□□□ -0.06
XRN1-204ENST00000465074 ABCB5Q2M3G0 1257 aa14.67□□□□□ -0.06
XRN1-204ENST00000465074 STK11IPQ8N1F8 1099 aa14.67□□□□□ -0.06
XRN1-204ENST00000465074 DYNLL2Q96FJ2 89 aa14.67□□□□□ -0.06
XRN1-204ENST00000465074 FEZ1Q99689 392 aa14.67□□□□□ -0.06
XRN1-204ENST00000465074 FSD1Q9BTV5 496 aa14.67□□□□□ -0.06
XRN1-204ENST00000465074 TBC1D2Q9BYX2 928 aa14.67□□□□□ -0.06
XRN1-204ENST00000465074 EHD4Q9H223 541 aa14.67□□□□□ -0.06
XRN1-204ENST00000465074 CABP5Q9NP86 173 aa14.67□□□□□ -0.06
XRN1-204ENST00000465074 USP17L10C9JJH3 530 aa14.66□□□□□ -0.06
XRN1-204ENST00000465074 RNF113AO15541 343 aaKnown RBP14.66□□□□□ -0.06
XRN1-204ENST00000465074 GLRX3O76003 335 aaKnown RBP14.66□□□□□ -0.06
XRN1-204ENST00000465074 APPP05067 770 aa14.66□□□□□ -0.06
XRN1-204ENST00000465074 TATDN1Q6P1N9 297 aa14.66□□□□□ -0.06
XRN1-204ENST00000465074 PROCA1Q8NCQ7 364 aaPredicted RBP14.66□□□□□ -0.06
XRN1-204ENST00000465074 WDR18Q9BV38 432 aa14.66□□□□□ -0.06
XRN1-204ENST00000465074 LNPKQ9C0E8 428 aa14.66□□□□□ -0.06
XRN1-204ENST00000465074 ATP8A2Q9NTI2 1148 aa14.66□□□□□ -0.06
XRN1-204ENST00000465074 PNMA3Q9UL41 463 aa14.66□□□□□ -0.06
XRN1-204ENST00000465074 USP17L12C9JPN9 530 aa14.65□□□□□ -0.06
XRN1-204ENST00000465074 USP17L21D6R901 530 aa14.65□□□□□ -0.06
XRN1-204ENST00000465074 OSBPP22059 807 aa14.65□□□□□ -0.06
XRN1-204ENST00000465074 SHMT1P34896 483 aa14.65□□□□□ -0.06
XRN1-204ENST00000465074 BACE1P56817 501 aa14.65□□□□□ -0.06
XRN1-204ENST00000465074 PABPC4Q13310 644 aaKnown RBP eCLIP14.65□□□□□ -0.06
XRN1-204ENST00000465074 AAMPQ13685 434 aa14.65□□□□□ -0.06
XRN1-204ENST00000465074 LRRFIP1Q32MZ4 808 aaKnown RBP14.65□□□□□ -0.06
XRN1-204ENST00000465074 ANKRD13CQ8N6S4 541 aa14.65□□□□□ -0.06
XRN1-204ENST00000465074 SLC44A5Q8NCS7 719 aa14.65□□□□□ -0.06
XRN1-204ENST00000465074 PI4K2BQ8TCG2 481 aa14.65□□□□□ -0.06
XRN1-204ENST00000465074 TRIM47Q96LD4 638 aa14.65□□□□□ -0.06
XRN1-204ENST00000465074 PTCH2Q9Y6C5 1203 aa14.65□□□□□ -0.06
XRN1-204ENST00000465074 DDX60LQ5H9U9 1706 aaKnown RBP14.65□□□□□ -0.06
XRN1-204ENST00000465074 LOC285556D6RIA3 1793 aa14.65□□□□□ -0.06
XRN1-204ENST00000465074 MGAMO43451 1857 aa14.64□□□□□ -0.07
XRN1-204ENST00000465074 MINDY4BA8MYZ0 360 aa14.64□□□□□ -0.07
XRN1-204ENST00000465074 SMIM22K7EJ46 135 aa14.64□□□□□ -0.07
XRN1-204ENST00000465074 IGHDP01880 384 aa14.64□□□□□ -0.07
XRN1-204ENST00000465074 ZFYP08048 801 aaPredicted RBP14.64□□□□□ -0.07
XRN1-204ENST00000465074 IRX3P78415 501 aaPredicted RBP14.64□□□□□ -0.07
XRN1-204ENST00000465074 SLC9C1Q4G0N8 1177 aa14.64□□□□□ -0.07
XRN1-204ENST00000465074 APPBP2Q92624 585 aa14.64□□□□□ -0.07
XRN1-204ENST00000465074 OSBP2Q969R2 916 aa14.64□□□□□ -0.07
XRN1-204ENST00000465074 STRBPQ96SI9 672 aaKnown RBP14.64□□□□□ -0.07
XRN1-204ENST00000465074 ASCC2Q9H1I8 757 aaPredicted RBP14.64□□□□□ -0.07
XRN1-204ENST00000465074 GINM1Q9NU53 330 aa14.64□□□□□ -0.07
XRN1-204ENST00000465074 SLC45A1Q9Y2W3 748 aa14.64□□□□□ -0.07
XRN1-204ENST00000465074 ADGRA2Q96PE1 1338 aa14.64□□□□□ -0.07
XRN1-204ENST00000465074 C19orf81C9J6K1 198 aa14.63□□□□□ -0.07
XRN1-204ENST00000465074 M0R2C6 588 aa14.63□□□□□ -0.07
XRN1-204ENST00000465074 CTGFP29279 349 aa14.63□□□□□ -0.07
XRN1-204ENST00000465074 MLLT1Q03111 559 aaPredicted RBP14.63□□□□□ -0.07
XRN1-204ENST00000465074 SEPT2Q15019 361 aa14.63□□□□□ -0.07
XRN1-204ENST00000465074 SH3D19Q5HYK7 790 aa14.63□□□□□ -0.07
XRN1-204ENST00000465074 USP17L2Q6R6M4 530 aa14.63□□□□□ -0.07
XRN1-204ENST00000465074 SEC62Q99442 399 aaKnown RBP14.63□□□□□ -0.07
XRN1-204ENST00000465074 TAOK2Q9UL54 1235 aa14.63□□□□□ -0.07
XRN1-204ENST00000465074 GPAA1O43292 621 aa14.62□□□□□ -0.07
XRN1-204ENST00000465074 BCRP11274 1271 aa14.62□□□□□ -0.07
XRN1-204ENST00000465074 HOXD10P28358 340 aa14.62□□□□□ -0.07
XRN1-204ENST00000465074 DSG3P32926 999 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms