RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 TFRCP02786 760 aaKnown RBP27.8■■■□□ 2.04
USP42-205ENST00000465073 IRX3P78415 501 aaPredicted RBP27.8■■■□□ 2.04
USP42-205ENST00000465073 CEP85Q6P2H3 762 aa27.8■■■□□ 2.04
USP42-205ENST00000465073 DEFB118Q96PH6 123 aa27.8■■■□□ 2.04
USP42-205ENST00000465073 PAK6Q9NQU5 681 aaPredicted RBP27.8■■■□□ 2.04
USP42-205ENST00000465073 SAP30BPQ9UHR5 308 aaKnown RBP27.8■■■□□ 2.04
USP42-205ENST00000465073 DYNLL1P63167 89 aaKnown RBP27.79■■■□□ 2.04
USP42-205ENST00000465073 TMED8Q6PL24 325 aaPredicted RBP27.79■■■□□ 2.04
USP42-205ENST00000465073 MIER1Q8N108 512 aa27.79■■■□□ 2.04
USP42-205ENST00000465073 USP17L10C9JJH3 530 aa27.78■■■□□ 2.04
USP42-205ENST00000465073 ERC1Q8IUD2 1116 aa27.78■■■□□ 2.04
USP42-205ENST00000465073 GJD2Q9UKL4 321 aa27.78■■■□□ 2.04
USP42-205ENST00000465073 ZBTB21Q9ULJ3 1066 aa27.78■■■□□ 2.04
USP42-205ENST00000465073 NR2E3Q9Y5X4 410 aa27.78■■■□□ 2.04
USP42-205ENST00000465073 SIPA1L1O43166 1804 aa27.77■■■□□ 2.04
USP42-205ENST00000465073 CRISPLD2Q9H0B8 497 aa27.77■■■□□ 2.04
USP42-205ENST00000465073 GDF11O95390 407 aa27.76■■■□□ 2.04
USP42-205ENST00000465073 P2RX7Q99572 595 aaKnown RBP27.76■■■□□ 2.04
USP42-205ENST00000465073 DOCK3Q8IZD9 2030 aa27.76■■■□□ 2.03
USP42-205ENST00000465073 HMGCRP04035 888 aa27.76■■■□□ 2.03
USP42-205ENST00000465073 USP5P45974 858 aa27.76■■■□□ 2.03
USP42-205ENST00000465073 MAP3K12Q12852 859 aa27.76■■■□□ 2.03
USP42-205ENST00000465073 CHRDL2Q6WN34 429 aa27.76■■■□□ 2.03
USP42-205ENST00000465073 MAGEB6Q8N7X4 407 aa27.76■■■□□ 2.03
USP42-205ENST00000465073 MIGA1Q8NAN2 632 aa27.76■■■□□ 2.03
USP42-205ENST00000465073 SHROOM1Q2M3G4 852 aaPredicted RBP27.75■■■□□ 2.03
USP42-205ENST00000465073 HSP90AB4PQ58FF6 505 aa27.75■■■□□ 2.03
USP42-205ENST00000465073 AACSQ86V21 672 aa27.75■■■□□ 2.03
USP42-205ENST00000465073 GPRC5AQ8NFJ5 357 aa27.75■■■□□ 2.03
USP42-205ENST00000465073 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.75■■■□□ 2.032e-7■■■■□ 23.4
USP42-205ENST00000465073 EXOC6BQ9Y2D4 811 aa27.75■■■□□ 2.03
USP42-205ENST00000465073 TRIOBPQ9H2D6 2365 aa27.75■■■□□ 2.03
USP42-205ENST00000465073 HERVK_113P62684 666 aa27.74■■■□□ 2.03
USP42-205ENST00000465073 FOCADQ5VW36 1801 aa27.74■■■□□ 2.03
USP42-205ENST00000465073 PANK1Q8TE04 598 aa27.73■■■□□ 2.03
USP42-205ENST00000465073 ANTXR1Q9H6X2 564 aa27.73■■■□□ 2.03
USP42-205ENST00000465073 NDUFB9Q9Y6M9 179 aa27.73■■■□□ 2.03
USP42-205ENST00000465073 CDK5RAP2Q96SN8 1893 aa27.73■■■□□ 2.03
USP42-205ENST00000465073 MYO5AQ9Y4I1 1855 aaKnown RBP27.73■■■□□ 2.03
USP42-205ENST00000465073 TATDN1Q6P1N9 297 aa27.72■■■□□ 2.03
USP42-205ENST00000465073 USP17L2Q6R6M4 530 aa27.72■■■□□ 2.03
USP42-205ENST00000465073 GTF3C2Q8WUA4 911 aaPredicted RBP27.72■■■□□ 2.03
USP42-205ENST00000465073 EHD4Q9H223 541 aa27.72■■■□□ 2.03
USP42-205ENST00000465073 SERPINB13Q9UIV8 391 aa27.72■■■□□ 2.03
USP42-205ENST00000465073 GH2P01242 217 aa27.71■■■□□ 2.03
USP42-205ENST00000465073 TTC6Q86TZ1 520 aa27.71■■■□□ 2.03
USP42-205ENST00000465073 TXNRD2Q9NNW7 524 aa27.71■■■□□ 2.03
USP42-205ENST00000465073 EMILIN3Q9NT22 766 aa27.71■■■□□ 2.03
USP42-205ENST00000465073 RBM27Q9P2N5 1060 aaKnown RBP27.71■■■□□ 2.03
USP42-205ENST00000465073 ZBED9Q6R2W3 1325 aa27.71■■■□□ 2.03
USP42-205ENST00000465073 RPTORQ8N122 1335 aa27.71■■■□□ 2.03
USP42-205ENST00000465073 EVI5O60447 810 aa27.7■■■□□ 2.03
USP42-205ENST00000465073 HMX1Q9NP08 348 aaPredicted RBP27.7■■■□□ 2.03
USP42-205ENST00000465073 RBPJLQ9UBG7 517 aa27.7■■■□□ 2.03
USP42-205ENST00000465073 MS4A1P11836 297 aa27.7■■■□□ 2.02
USP42-205ENST00000465073 MAPK4P31152 587 aa27.7■■■□□ 2.02
USP42-205ENST00000465073 TTF1Q15361 905 aaPredicted RBP27.7■■■□□ 2.02
USP42-205ENST00000465073 ANKLE1Q8NAG6 615 aa27.7■■■□□ 2.02
USP42-205ENST00000465073 SOCS4Q8WXH5 440 aa27.7■■■□□ 2.02
USP42-205ENST00000465073 NUDT12Q9BQG2 462 aa27.7■■■□□ 2.02
USP42-205ENST00000465073 XRCC5P13010 732 aaKnown RBP27.69■■■□□ 2.02
USP42-205ENST00000465073 DIEXFQ68CQ4 756 aaKnown RBP27.69■■■□□ 2.02
USP42-205ENST00000465073 PAWRQ96IZ0 340 aaKnown RBP27.69■■■□□ 2.02
USP42-205ENST00000465073 NECAB2Q7Z6G3 386 aa27.68■■■□□ 2.02
USP42-205ENST00000465073 CCAR1Q8IX12 1150 aaKnown RBP27.68■■■□□ 2.02
USP42-205ENST00000465073 RHPN1Q8TCX5 695 aa27.68■■■□□ 2.02
USP42-205ENST00000465073 C12orf42Q96LP6 360 aa27.68■■■□□ 2.02
USP42-205ENST00000465073 IL1RAPL2Q9NP60 686 aa27.68■■■□□ 2.02
USP42-205ENST00000465073 PEX10O60683 326 aa27.67■■■□□ 2.02
USP42-205ENST00000465073 CYP2B6P20813 491 aa27.67■■■□□ 2.02
USP42-205ENST00000465073 ERVK-9P63128 1117 aa27.67■■■□□ 2.02
USP42-205ENST00000465073 ERVK-24P63145 666 aa27.67■■■□□ 2.02
USP42-205ENST00000465073 TRIM32Q13049 653 aa27.67■■■□□ 2.02
USP42-205ENST00000465073 PDE3AQ14432 1141 aa27.67■■■□□ 2.02
USP42-205ENST00000465073 CERKLQ49MI3 558 aaPredicted RBP27.67■■■□□ 2.02
USP42-205ENST00000465073 TRMT44Q8IYL2 757 aaKnown RBP27.67■■■□□ 2.02
USP42-205ENST00000465073 TRIB2Q92519 343 aa27.67■■■□□ 2.02
USP42-205ENST00000465073 FEZ1Q99689 392 aa27.67■■■□□ 2.02
USP42-205ENST00000465073 RIOK1Q9BRS2 568 aaKnown RBP27.67■■■□□ 2.02
USP42-205ENST00000465073 PRO3102Q9H379 93 aa27.67■■■□□ 2.02
USP42-205ENST00000465073 Q3C1V9 767 aa27.66■■■□□ 2.02
USP42-205ENST00000465073 MAGEB6P1A0A0J9YX57 407 aa27.65■■■□□ 2.02
USP42-205ENST00000465073 USP17L15C9J2P7 530 aa27.65■■■□□ 2.02
USP42-205ENST00000465073 USP17L13C9JLJ4 530 aa27.65■■■□□ 2.02
USP42-205ENST00000465073 USP17L11C9JVI0 530 aa27.65■■■□□ 2.02
USP42-205ENST00000465073 USP17L18D6R9N7 530 aa27.65■■■□□ 2.02
USP42-205ENST00000465073 USP17L22D6RA61 530 aa27.65■■■□□ 2.02
USP42-205ENST00000465073 USP17L17D6RBQ6 530 aa27.65■■■□□ 2.02
USP42-205ENST00000465073 USP17L19D6RCP7 530 aa27.65■■■□□ 2.02
USP42-205ENST00000465073 USP17L20D6RJB6 530 aa27.65■■■□□ 2.02
USP42-205ENST00000465073 USP14P54578 494 aa27.65■■■□□ 2.02
USP42-205ENST00000465073 USP17L24Q0WX57 530 aa27.65■■■□□ 2.02
USP42-205ENST00000465073 ABCB5Q2M3G0 1257 aa27.65■■■□□ 2.02
USP42-205ENST00000465073 MAP3K21Q5TCX8 1036 aa27.65■■■□□ 2.02
USP42-205ENST00000465073 RPAP2Q8IXW5 612 aaPredicted RBP27.65■■■□□ 2.02
USP42-205ENST00000465073 CLASRPQ8N2M8 674 aaKnown RBP27.65■■■□□ 2.02
USP42-205ENST00000465073 KIAA1683Q9H0B3 1180 aa27.65■■■□□ 2.02
USP42-205ENST00000465073 RAB3GAP1Q15042 981 aa27.64■■■□□ 2.02
USP42-205ENST00000465073 SLC9C2Q5TAH2 1124 aa27.64■■■□□ 2.02
USP42-205ENST00000465073 DIS3LQ8TF46 1054 aaKnown RBP27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms