RNA–Protein interactions for RNA: ENST00000465057.5

CMTM1-207, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-207ENST00000465057 ALDH16A1Q8IZ83 802 aa7.18□□□□□ -1.26
CMTM1-207ENST00000465057 TMEM151AQ8N4L1 468 aa7.18□□□□□ -1.26
CMTM1-207ENST00000465057 CNBD1Q8NA66 436 aa7.18□□□□□ -1.26
CMTM1-207ENST00000465057 SETDB2Q96T68 719 aa7.18□□□□□ -1.26
CMTM1-207ENST00000465057 ARID3AQ99856 593 aa7.18□□□□□ -1.26
CMTM1-207ENST00000465057 BRIP1Q9BX63 1249 aa7.18□□□□□ -1.26
CMTM1-207ENST00000465057 MIS18AQ9NYP9 233 aa7.18□□□□□ -1.26
CMTM1-207ENST00000465057 ANKIB1Q9P2G1 1089 aa7.18□□□□□ -1.26
CMTM1-207ENST00000465057 SCN4AP35499 1836 aa7.17□□□□□ -1.26
CMTM1-207ENST00000465057 FAM177BA6PVY3 158 aa7.17□□□□□ -1.26
CMTM1-207ENST00000465057 PHF20L1A8MW92 1017 aa7.17□□□□□ -1.26
CMTM1-207ENST00000465057 SNRPA1P09661 255 aaKnown RBP7.17□□□□□ -1.26
CMTM1-207ENST00000465057 PDE6BP35913 854 aa7.17□□□□□ -1.26
CMTM1-207ENST00000465057 ST5P78524 1137 aa7.17□□□□□ -1.26
CMTM1-207ENST00000465057 B4GALNT3Q6L9W6 998 aa7.17□□□□□ -1.26
CMTM1-207ENST00000465057 DNAJC5GQ8N7S2 189 aa7.17□□□□□ -1.26
CMTM1-207ENST00000465057 CCDC97Q96F63 343 aaPredicted RBP7.17□□□□□ -1.26
CMTM1-207ENST00000465057 PKNOX2Q96KN3 472 aa7.17□□□□□ -1.26
CMTM1-207ENST00000465057 CHMP4AQ9BY43 222 aa7.17□□□□□ -1.26
CMTM1-207ENST00000465057 KLF15Q9UIH9 416 aa7.17□□□□□ -1.26
CMTM1-207ENST00000465057 SERPINA10Q9UK55 444 aa7.17□□□□□ -1.26
CMTM1-207ENST00000465057 TAF1P21675 1872 aa7.16□□□□□ -1.26
CMTM1-207ENST00000465057 GLTPD2A6NH11 291 aa7.16□□□□□ -1.26
CMTM1-207ENST00000465057 NEURL1BA8MQ27 555 aa7.16□□□□□ -1.26
CMTM1-207ENST00000465057 LGR5O75473 907 aa7.16□□□□□ -1.26
CMTM1-207ENST00000465057 EPXP11678 715 aa7.16□□□□□ -1.26
CMTM1-207ENST00000465057 ADH6P28332 368 aa7.16□□□□□ -1.26
CMTM1-207ENST00000465057 FSTL1Q12841 308 aa7.16□□□□□ -1.26
CMTM1-207ENST00000465057 HLFQ16534 295 aa7.16□□□□□ -1.26
CMTM1-207ENST00000465057 ZNF468Q5VIY5 522 aaPredicted RBP7.16□□□□□ -1.26
CMTM1-207ENST00000465057 PRPF40BQ6NWY9 871 aaKnown RBP7.16□□□□□ -1.26
CMTM1-207ENST00000465057 PODNQ7Z5L7 613 aa7.16□□□□□ -1.26
CMTM1-207ENST00000465057 NBPF5PQ86XG9 351 aaPredicted RBP7.16□□□□□ -1.26
CMTM1-207ENST00000465057 FAM200AQ8TCP9 573 aa7.16□□□□□ -1.26
CMTM1-207ENST00000465057 SUSD3Q96L08 255 aa7.16□□□□□ -1.26
CMTM1-207ENST00000465057 THUMPD2Q9BTF0 503 aaKnown RBP7.16□□□□□ -1.26
CMTM1-207ENST00000465057 BABAM1Q9NWV8 329 aa7.16□□□□□ -1.26
CMTM1-207ENST00000465057 PRR12Q9ULL5 1215 aa7.16□□□□□ -1.26
CMTM1-207ENST00000465057 NIP7Q9Y221 180 aaKnown RBP eCLIP7.16□□□□□ -1.26
CMTM1-207ENST00000465057 SRGNP10124 158 aa7.15□□□□□ -1.26
CMTM1-207ENST00000465057 WEE1P30291 646 aa7.15□□□□□ -1.26
CMTM1-207ENST00000465057 SFSWAPQ12872 951 aaKnown RBP7.15□□□□□ -1.26
CMTM1-207ENST00000465057 TAF7Q15545 349 aaPredicted RBP7.15□□□□□ -1.26
CMTM1-207ENST00000465057 OLFM4Q6UX06 510 aa7.15□□□□□ -1.26
CMTM1-207ENST00000465057 FAM43AQ8N2R8 423 aa7.15□□□□□ -1.26
CMTM1-207ENST00000465057 NGEFQ8N5V2 710 aa7.15□□□□□ -1.26
CMTM1-207ENST00000465057 ZNF280CQ8ND82 737 aa7.15□□□□□ -1.26
CMTM1-207ENST00000465057 SMC1BQ8NDV3 1235 aa7.15□□□□□ -1.26
CMTM1-207ENST00000465057 PNISRQ8TF01 805 aaKnown RBP7.15□□□□□ -1.26
CMTM1-207ENST00000465057 MASTLQ96GX5 879 aa7.15□□□□□ -1.26
CMTM1-207ENST00000465057 HSH2DQ96JZ2 352 aa7.15□□□□□ -1.26
CMTM1-207ENST00000465057 BTBD6Q96KE9 485 aa7.15□□□□□ -1.26
CMTM1-207ENST00000465057 PLEKHF1Q96S99 279 aa7.15□□□□□ -1.26
CMTM1-207ENST00000465057 TAOK3Q9H2K8 898 aa7.15□□□□□ -1.26
CMTM1-207ENST00000465057 ZNF652Q9Y2D9 606 aa7.15□□□□□ -1.26
CMTM1-207ENST00000465057 ABCC12Q96J65 1359 aa7.15□□□□□ -1.26
CMTM1-207ENST00000465057 VEGFAP15692 232 aaPredicted RBP7.14□□□□□ -1.27
CMTM1-207ENST00000465057 SNRPNP63162 240 aaKnown RBP7.14□□□□□ -1.27
CMTM1-207ENST00000465057 LTBP1Q14766 1721 aa7.14□□□□□ -1.27
CMTM1-207ENST00000465057 RALBP1Q15311 655 aa7.14□□□□□ -1.27
CMTM1-207ENST00000465057 NFE2L2Q16236 605 aa7.14□□□□□ -1.27
CMTM1-207ENST00000465057 HIF1AQ16665 826 aa7.14□□□□□ -1.27
CMTM1-207ENST00000465057 STYK1Q6J9G0 422 aa7.14□□□□□ -1.27
CMTM1-207ENST00000465057 CLEC4GQ6UXB4 293 aa7.14□□□□□ -1.27
CMTM1-207ENST00000465057 TTLL7Q6ZT98 887 aa7.14□□□□□ -1.27
CMTM1-207ENST00000465057 FCHSD1Q86WN1 690 aa7.14□□□□□ -1.27
CMTM1-207ENST00000465057 ADAMTSL1Q8N6G6 1762 aa7.14□□□□□ -1.27
CMTM1-207ENST00000465057 CEP63Q96MT8 703 aa7.14□□□□□ -1.27
CMTM1-207ENST00000465057 BRD7Q9NPI1 651 aa7.14□□□□□ -1.27
CMTM1-207ENST00000465057 NOVA2Q9UNW9 492 aaKnown RBP7.14□□□□□ -1.27
CMTM1-207ENST00000465057 DDX60Q8IY21 1712 aaKnown RBP7.13□□□□□ -1.27
CMTM1-207ENST00000465057 COL4A5P29400 1685 aa7.13□□□□□ -1.27
CMTM1-207ENST00000465057 UBN2Q6ZU65 1347 aa7.13□□□□□ -1.27
CMTM1-207ENST00000465057 LTBP3Q9NS15 1303 aa7.13□□□□□ -1.27
CMTM1-207ENST00000465057 MAPK8IP3Q9UPT6 1336 aa7.13□□□□□ -1.27
CMTM1-207ENST00000465057 DDNO94850 711 aaPredicted RBP7.13□□□□□ -1.27
CMTM1-207ENST00000465057 MYL6BP14649 208 aa7.13□□□□□ -1.27
CMTM1-207ENST00000465057 HOXB4P17483 251 aaPredicted RBP7.13□□□□□ -1.27
CMTM1-207ENST00000465057 GPTP24298 496 aa7.13□□□□□ -1.27
CMTM1-207ENST00000465057 PCBP4P57723 403 aaKnown RBP7.13□□□□□ -1.27
CMTM1-207ENST00000465057 EIF4A1P60842 406 aaKnown RBP7.13□□□□□ -1.27
CMTM1-207ENST00000465057 ELOAQ14241 798 aaKnown RBP7.13□□□□□ -1.27
CMTM1-207ENST00000465057 SUZ12Q15022 739 aaKnown RBP7.13□□□□□ -1.27
CMTM1-207ENST00000465057 RTN1Q16799 776 aa7.13□□□□□ -1.27
CMTM1-207ENST00000465057 SLC51AQ86UW1 340 aa7.13□□□□□ -1.27
CMTM1-207ENST00000465057 KCTD17Q8N5Z5 321 aa7.13□□□□□ -1.27
CMTM1-207ENST00000465057 MRS2Q9HD23 443 aa7.13□□□□□ -1.27
CMTM1-207ENST00000465057 MKL2Q9ULH7 1088 aa7.13□□□□□ -1.27
CMTM1-207ENST00000465057 RRP7AQ9Y3A4 280 aaKnown RBP7.13□□□□□ -1.27
CMTM1-207ENST00000465057 SNED1Q8TER0 1413 aa7.12□□□□□ -1.27
CMTM1-207ENST00000465057 MAP3K15Q6ZN16 1313 aa7.12□□□□□ -1.27
CMTM1-207ENST00000465057 ZNF541Q9H0D2 1346 aa7.12□□□□□ -1.27
CMTM1-207ENST00000465057 NPR1P16066 1061 aa7.12□□□□□ -1.27
CMTM1-207ENST00000465057 AMPD1P23109 780 aa7.12□□□□□ -1.27
CMTM1-207ENST00000465057 TYRO3Q06418 890 aa7.12□□□□□ -1.27
CMTM1-207ENST00000465057 GRIN2CQ14957 1233 aa7.12□□□□□ -1.27
CMTM1-207ENST00000465057 CCDC93Q567U6 631 aa7.12□□□□□ -1.27
CMTM1-207ENST00000465057 L1TD1Q5T7N2 865 aaKnown RBP7.12□□□□□ -1.27
CMTM1-207ENST00000465057 TPTE2Q6XPS3 522 aa7.12□□□□□ -1.27
CMTM1-207ENST00000465057 SYT9Q86SS6 491 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms