RNA–Protein interactions for RNA: ENST00000465014.6

CBWD1-211, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-211ENST00000465014 ZHX2Q9Y6X8 837 aa9.32□□□□□ -0.92
CBWD1-211ENST00000465014 LOC285556D6RIA3 1793 aa9.31□□□□□ -0.92
CBWD1-211ENST00000465014 RBBP6Q7Z6E9 1792 aaKnown RBP9.31□□□□□ -0.92
CBWD1-211ENST00000465014 PDHXO00330 501 aa9.31□□□□□ -0.92
CBWD1-211ENST00000465014 TBC1D12O60347 775 aa9.31□□□□□ -0.92
CBWD1-211ENST00000465014 TLR2O60603 784 aa9.31□□□□□ -0.92
CBWD1-211ENST00000465014 CTNND1O60716 968 aaKnown RBP9.31□□□□□ -0.92
CBWD1-211ENST00000465014 ECM2O94769 699 aaPredicted RBP9.31□□□□□ -0.92
CBWD1-211ENST00000465014 CYP7A1P22680 504 aa9.31□□□□□ -0.92
CBWD1-211ENST00000465014 PPP4CP60510 307 aa9.31□□□□□ -0.92
CBWD1-211ENST00000465014 ANKRD23Q86SG2 305 aa9.31□□□□□ -0.92
CBWD1-211ENST00000465014 MAPKAPK5Q8IW41 473 aa9.31□□□□□ -0.92
CBWD1-211ENST00000465014 MAGEB6Q8N7X4 407 aa9.31□□□□□ -0.92
CBWD1-211ENST00000465014 KIF1BPQ96EK5 621 aa9.31□□□□□ -0.92
CBWD1-211ENST00000465014 ZCCHC17Q9NP64 241 aaKnown RBP9.31□□□□□ -0.92
CBWD1-211ENST00000465014 PTPN22Q9Y2R2 807 aa9.31□□□□□ -0.92
CBWD1-211ENST00000465014 BAZ2AQ9UIF9 1905 aaKnown RBP9.31□□□□□ -0.92
CBWD1-211ENST00000465014 CXCL11O14625 94 aa9.3□□□□□ -0.92
CBWD1-211ENST00000465014 PDE3AQ14432 1141 aa9.3□□□□□ -0.92
CBWD1-211ENST00000465014 RRP1BQ14684 758 aaKnown RBP9.3□□□□□ -0.92
CBWD1-211ENST00000465014 GPAT2Q6NUI2 795 aa9.3□□□□□ -0.92
CBWD1-211ENST00000465014 GADL1Q6ZQY3 521 aa9.3□□□□□ -0.92
CBWD1-211ENST00000465014 CLASRPQ8N2M8 674 aaKnown RBP9.3□□□□□ -0.92
CBWD1-211ENST00000465014 MIGA1Q8NAN2 632 aa9.3□□□□□ -0.92
CBWD1-211ENST00000465014 ARHGAP39Q9C0H5 1083 aa9.3□□□□□ -0.92
CBWD1-211ENST00000465014 CHMP4BQ9H444 224 aaKnown RBP9.3□□□□□ -0.92
CBWD1-211ENST00000465014 SAP30BPQ9UHR5 308 aaKnown RBP9.3□□□□□ -0.92
CBWD1-211ENST00000465014 CPA4Q9UI42 421 aa9.3□□□□□ -0.92
CBWD1-211ENST00000465014 AFG3L2Q9Y4W6 797 aa9.3□□□□□ -0.92
CBWD1-211ENST00000465014 HTTP42858 3142 aa9.3□□□□□ -0.92
CBWD1-211ENST00000465014 A0A0G2JLL6 359 aaPredicted RBP9.29□□□□□ -0.92
CBWD1-211ENST00000465014 TRIM75PA6NK02 468 aa9.29□□□□□ -0.92
CBWD1-211ENST00000465014 IFIT2P09913 472 aaKnown RBP9.29□□□□□ -0.92
CBWD1-211ENST00000465014 LSM11P83369 360 aaKnown RBP eCLIP9.29□□□□□ -0.92
CBWD1-211ENST00000465014 SLC4A8Q2Y0W8 1093 aa9.29□□□□□ -0.92
CBWD1-211ENST00000465014 C17orf99Q6UX52 265 aa9.29□□□□□ -0.92
CBWD1-211ENST00000465014 PRRT2Q7Z6L0 340 aaPredicted RBP9.29□□□□□ -0.92
CBWD1-211ENST00000465014 PALD1Q9ULE6 856 aa9.29□□□□□ -0.92
CBWD1-211ENST00000465014 FLT1P17948 1338 aa9.29□□□□□ -0.92
CBWD1-211ENST00000465014 ADGRA2Q96PE1 1338 aa9.29□□□□□ -0.92
CBWD1-211ENST00000465014 DDX60LQ5H9U9 1706 aaKnown RBP9.29□□□□□ -0.92
CBWD1-211ENST00000465014 CENPFP49454 3210 aa9.29□□□□□ -0.92
CBWD1-211ENST00000465014 RAB11FIP3O75154 756 aa9.29□□□□□ -0.92
CBWD1-211ENST00000465014 CYP2C8P10632 490 aa9.29□□□□□ -0.92
CBWD1-211ENST00000465014 LACTBP83111 547 aaPredicted RBP9.29□□□□□ -0.92
CBWD1-211ENST00000465014 MAP3K12Q12852 859 aa9.29□□□□□ -0.92
CBWD1-211ENST00000465014 KIF22Q14807 665 aa9.29□□□□□ -0.92
CBWD1-211ENST00000465014 DNAJC2Q99543 621 aaKnown RBP9.29□□□□□ -0.92
CBWD1-211ENST00000465014 DHX36Q9H2U1 1008 aaKnown RBP9.29□□□□□ -0.92
CBWD1-211ENST00000465014 PI4KBQ9UBF8 816 aa9.29□□□□□ -0.92
CBWD1-211ENST00000465014 GOLIM4O00461 696 aa9.28□□□□□ -0.92
CBWD1-211ENST00000465014 SMARCA5O60264 1052 aaPredicted RBP9.28□□□□□ -0.92
CBWD1-211ENST00000465014 IGSF3O75054 1194 aa9.28□□□□□ -0.92
CBWD1-211ENST00000465014 CTGFP29279 349 aa9.28□□□□□ -0.92
CBWD1-211ENST00000465014 CAP2P40123 477 aa9.28□□□□□ -0.92
CBWD1-211ENST00000465014 ARHGEF6Q15052 776 aa9.28□□□□□ -0.92
CBWD1-211ENST00000465014 FASTKD5Q7L8L6 764 aaKnown RBP9.28□□□□□ -0.92
CBWD1-211ENST00000465014 CRACR2BQ8N4Y2 399 aaPredicted RBP9.28□□□□□ -0.92
CBWD1-211ENST00000465014 EDC3Q96F86 508 aaKnown RBP9.28□□□□□ -0.92
CBWD1-211ENST00000465014 PARK7Q99497 189 aaKnown RBP9.28□□□□□ -0.92
CBWD1-211ENST00000465014 DNAJC18Q9H819 358 aa9.28□□□□□ -0.92
CBWD1-211ENST00000465014 HERC5Q9UII4 1024 aaKnown RBP9.28□□□□□ -0.92
CBWD1-211ENST00000465014 PTCH2Q9Y6C5 1203 aa9.28□□□□□ -0.92
CBWD1-211ENST00000465014 USP5P45974 858 aa9.27□□□□□ -0.93
CBWD1-211ENST00000465014 JAG1P78504 1218 aa9.27□□□□□ -0.93
CBWD1-211ENST00000465014 SPP2Q13103 211 aa9.27□□□□□ -0.93
CBWD1-211ENST00000465014 TTF1Q15361 905 aaPredicted RBP9.27□□□□□ -0.93
CBWD1-211ENST00000465014 SHROOM1Q2M3G4 852 aaPredicted RBP9.27□□□□□ -0.93
CBWD1-211ENST00000465014 TREML2Q5T2D2 321 aa9.27□□□□□ -0.93
CBWD1-211ENST00000465014 GPR153Q6NV75 609 aa9.27□□□□□ -0.93
CBWD1-211ENST00000465014 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.27□□□□□ -0.93
CBWD1-211ENST00000465014 TRIM34Q9BYJ4 488 aa9.27□□□□□ -0.93
CBWD1-211ENST00000465014 BOLA2Q9H3K6 86 aa9.27□□□□□ -0.93
CBWD1-211ENST00000465014 MAGEB6P1A0A0J9YX57 407 aa9.26□□□□□ -0.93
CBWD1-211ENST00000465014 USP17L5A8MUK1 530 aa9.26□□□□□ -0.93
CBWD1-211ENST00000465014 GDF11O95390 407 aa9.26□□□□□ -0.93
CBWD1-211ENST00000465014 HLA-DOAP06340 250 aa9.26□□□□□ -0.93
CBWD1-211ENST00000465014 BCRP11274 1271 aa9.26□□□□□ -0.93
CBWD1-211ENST00000465014 PDE6AP16499 860 aa9.26□□□□□ -0.93
CBWD1-211ENST00000465014 PSMC4P43686 418 aa9.26□□□□□ -0.93
CBWD1-211ENST00000465014 HMGCS2P54868 508 aa9.26□□□□□ -0.93
CBWD1-211ENST00000465014 SLC9C2Q5TAH2 1124 aa9.26□□□□□ -0.93
CBWD1-211ENST00000465014 METTL16Q86W50 562 aaKnown RBP9.26□□□□□ -0.93
CBWD1-211ENST00000465014 FOXP4Q8IVH2 680 aaPredicted RBP9.26□□□□□ -0.93
CBWD1-211ENST00000465014 ZNF280CQ8ND82 737 aa9.26□□□□□ -0.93
CBWD1-211ENST00000465014 TRIM47Q96LD4 638 aa9.26□□□□□ -0.93
CBWD1-211ENST00000465014 YTHDC1Q96MU7 727 aaKnown RBP9.26□□□□□ -0.93
CBWD1-211ENST00000465014 LRRCC1Q9C099 1032 aa9.26□□□□□ -0.93
CBWD1-211ENST00000465014 ZNF532Q9HCE3 1301 aa9.25□□□□□ -0.93
CBWD1-211ENST00000465014 FMNL1O95466 1100 aaPredicted RBP9.25□□□□□ -0.93
CBWD1-211ENST00000465014 MYCP01106 439 aaPredicted RBP9.25□□□□□ -0.93
CBWD1-211ENST00000465014 PSEN1P49768 467 aa9.25□□□□□ -0.93
CBWD1-211ENST00000465014 SLFNL1Q499Z3 407 aa9.25□□□□□ -0.93
CBWD1-211ENST00000465014 SLC9C1Q4G0N8 1177 aa9.25□□□□□ -0.93
CBWD1-211ENST00000465014 CERS3Q8IU89 383 aa9.25□□□□□ -0.93
CBWD1-211ENST00000465014 ARMC5Q96C12 935 aa9.25□□□□□ -0.93
CBWD1-211ENST00000465014 RIOK1Q9BRS2 568 aaKnown RBP9.25□□□□□ -0.93
CBWD1-211ENST00000465014 PAG1Q9NWQ8 432 aa9.25□□□□□ -0.93
CBWD1-211ENST00000465014 AGTPBP1Q9UPW5 1226 aa9.25□□□□□ -0.93
CBWD1-211ENST00000465014 SLC45A1Q9Y2W3 748 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms