RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 DEFB115Q30KQ5 88 aa10.64□□□□□ -0.71
NUDCD3-204ENST00000464812 AKNAD1Q5T1N1 836 aa10.64□□□□□ -0.71
NUDCD3-204ENST00000464812 RNF20Q5VTR2 975 aa10.64□□□□□ -0.71
NUDCD3-204ENST00000464812 C16orf86Q6ZW13 317 aa10.64□□□□□ -0.71
NUDCD3-204ENST00000464812 DDRGK1Q96HY6 314 aa10.64□□□□□ -0.71
NUDCD3-204ENST00000464812 TCEANC2Q96MN5 208 aa10.64□□□□□ -0.71
NUDCD3-204ENST00000464812 CSRNP1Q96S65 589 aa10.64□□□□□ -0.71
NUDCD3-204ENST00000464812 EHD4Q9H223 541 aa10.64□□□□□ -0.71
NUDCD3-204ENST00000464812 PTPRFP10586 1907 aa10.64□□□□□ -0.71
NUDCD3-204ENST00000464812 WDR33Q9C0J8 1336 aaKnown RBP10.63□□□□□ -0.71
NUDCD3-204ENST00000464812 B4E1Z4 1266 aa10.63□□□□□ -0.71
NUDCD3-204ENST00000464812 ORC4O43929 436 aa10.63□□□□□ -0.71
NUDCD3-204ENST00000464812 CASTP20810 708 aaKnown RBP10.63□□□□□ -0.71
NUDCD3-204ENST00000464812 GJA5P36382 358 aa10.63□□□□□ -0.71
NUDCD3-204ENST00000464812 HUNKP57058 714 aa10.63□□□□□ -0.71
NUDCD3-204ENST00000464812 RRP1BQ14684 758 aaKnown RBP10.63□□□□□ -0.71
NUDCD3-204ENST00000464812 LDLRAD1Q5T700 205 aa10.63□□□□□ -0.71
NUDCD3-204ENST00000464812 CYB5R4Q7L1T6 521 aa10.63□□□□□ -0.71
NUDCD3-204ENST00000464812 CHST3Q7LGC8 479 aa10.63□□□□□ -0.71
NUDCD3-204ENST00000464812 METTL16Q86W50 562 aaKnown RBP10.63□□□□□ -0.71
NUDCD3-204ENST00000464812 ZSCAN29Q8IWY8 852 aaPredicted RBP10.63□□□□□ -0.71
NUDCD3-204ENST00000464812 CLMNQ96JQ2 1002 aa10.63□□□□□ -0.71
NUDCD3-204ENST00000464812 CAPNS2Q96L46 248 aa10.63□□□□□ -0.71
NUDCD3-204ENST00000464812 TTC14Q96N46 770 aa10.63□□□□□ -0.71
NUDCD3-204ENST00000464812 ABT1Q9ULW3 272 aaKnown RBP10.63□□□□□ -0.71
NUDCD3-204ENST00000464812 USP2O75604 605 aaPredicted RBP10.62□□□□□ -0.71
NUDCD3-204ENST00000464812 HLA-DOAP06340 250 aa10.62□□□□□ -0.71
NUDCD3-204ENST00000464812 ZKSCAN1P17029 563 aaPredicted RBP10.62□□□□□ -0.71
NUDCD3-204ENST00000464812 RASA1P20936 1047 aa10.62□□□□□ -0.71
NUDCD3-204ENST00000464812 TNNI2P48788 182 aa10.62□□□□□ -0.71
NUDCD3-204ENST00000464812 CDK8P49336 464 aa10.62□□□□□ -0.71
NUDCD3-204ENST00000464812 JAG1P78504 1218 aa10.62□□□□□ -0.71
NUDCD3-204ENST00000464812 TNFAIP1Q13829 316 aa10.62□□□□□ -0.71
NUDCD3-204ENST00000464812 PRKG1Q13976 671 aa10.62□□□□□ -0.71
NUDCD3-204ENST00000464812 MAP3K11Q16584 847 aa10.62□□□□□ -0.71
NUDCD3-204ENST00000464812 FAM47AQ5JRC9 791 aa10.62□□□□□ -0.71
NUDCD3-204ENST00000464812 RRP12Q5JTH9 1297 aaKnown RBP10.62□□□□□ -0.71
NUDCD3-204ENST00000464812 TTC6Q86TZ1 520 aa10.62□□□□□ -0.71
NUDCD3-204ENST00000464812 RASAL3Q86YV0 1011 aa10.62□□□□□ -0.71
NUDCD3-204ENST00000464812 SP7Q8TDD2 431 aaPredicted RBP10.62□□□□□ -0.71
NUDCD3-204ENST00000464812 HHIPL1Q96JK4 782 aa10.62□□□□□ -0.71
NUDCD3-204ENST00000464812 LRRC2Q9BYS8 371 aa10.62□□□□□ -0.71
NUDCD3-204ENST00000464812 TM6SF1Q9BZW5 370 aa10.62□□□□□ -0.71
NUDCD3-204ENST00000464812 DHX36Q9H2U1 1008 aaKnown RBP10.62□□□□□ -0.71
NUDCD3-204ENST00000464812 ZSWIM6Q9HCJ5 1215 aa10.62□□□□□ -0.71
NUDCD3-204ENST00000464812 GPHNQ9NQX3 736 aaPredicted RBP10.62□□□□□ -0.71
NUDCD3-204ENST00000464812 SERPINB13Q9UIV8 391 aa10.62□□□□□ -0.71
NUDCD3-204ENST00000464812 PLIN4Q96Q06 1357 aa10.62□□□□□ -0.71
NUDCD3-204ENST00000464812 KDM4AO75164 1064 aa10.61□□□□□ -0.71
NUDCD3-204ENST00000464812 AKR1B1P15121 316 aa10.61□□□□□ -0.71
NUDCD3-204ENST00000464812 RPS6KB1P23443 525 aa10.61□□□□□ -0.71
NUDCD3-204ENST00000464812 KRT32Q14532 448 aa10.61□□□□□ -0.71
NUDCD3-204ENST00000464812 MFSD6Q6ZSS7 791 aa10.61□□□□□ -0.71
NUDCD3-204ENST00000464812 AMOTL1Q8IY63 956 aa10.61□□□□□ -0.71
NUDCD3-204ENST00000464812 NCOA7Q8NI08 942 aa10.61□□□□□ -0.71
NUDCD3-204ENST00000464812 NEK1Q96PY6 1258 aa10.61□□□□□ -0.71
NUDCD3-204ENST00000464812 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.61□□□□□ -0.71
NUDCD3-204ENST00000464812 WBP1LQ9NX94 342 aa10.61□□□□□ -0.71
NUDCD3-204ENST00000464812 PI4KBQ9UBF8 816 aa10.61□□□□□ -0.71
NUDCD3-204ENST00000464812 RBM19Q9Y4C8 960 aaKnown RBP10.61□□□□□ -0.71
NUDCD3-204ENST00000464812 PPP2R3BQ9Y5P8 575 aa10.61□□□□□ -0.71
NUDCD3-204ENST00000464812 FOXN1O15353 648 aa10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 NMT2O60551 498 aa10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 GDF11O95390 407 aa10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 SLC10A3P09131 477 aa10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 HSPA1AP0DMV8 641 aaKnown RBP10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 HSPA1BP0DMV9 641 aaKnown RBP10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 EXOSC10Q01780 885 aaKnown RBP10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 MAP3K10Q02779 954 aa10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 TOB2Q14106 344 aaPredicted RBP10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 RABEP1Q15276 862 aa10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 RGMBQ6NW40 437 aa10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 TATDN1Q6P1N9 297 aa10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 BLOC1S2Q6QNY1 142 aa10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 RUFY3Q7L099 469 aa10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 MIGA2Q7L4E1 593 aa10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 CLEC10AQ8IUN9 316 aa10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 REM2Q8IYK8 340 aaPredicted RBP10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 CRACR2BQ8N4Y2 399 aaPredicted RBP10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 ZKSCAN3Q9BRR0 538 aa10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 RNF41Q9H4P4 317 aaPredicted RBP10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 SENP2Q9HC62 589 aa10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 TOMM22Q9NS69 142 aa10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 ZSWIM5Q9P217 1185 aa10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 SWAP70Q9UH65 585 aa10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 PARP14Q460N5 1801 aa10.6□□□□□ -0.71
NUDCD3-204ENST00000464812 PRC1O43663 620 aa10.59□□□□□ -0.71
NUDCD3-204ENST00000464812 RANBP6O60518 1105 aaKnown RBP10.59□□□□□ -0.71
NUDCD3-204ENST00000464812 LARGE1O95461 756 aa10.59□□□□□ -0.71
NUDCD3-204ENST00000464812 SLC3A2P08195 630 aaKnown RBP10.59□□□□□ -0.71
NUDCD3-204ENST00000464812 PCP11498 1178 aaKnown RBP10.59□□□□□ -0.71
NUDCD3-204ENST00000464812 PDE4BQ07343 736 aa10.59□□□□□ -0.71
NUDCD3-204ENST00000464812 GRM1Q13255 1194 aa10.59□□□□□ -0.71
NUDCD3-204ENST00000464812 RALYLQ86SE5 291 aaKnown RBP10.59□□□□□ -0.71
NUDCD3-204ENST00000464812 KRT23Q9C075 422 aa10.59□□□□□ -0.71
NUDCD3-204ENST00000464812 CNNM2Q9H8M5 875 aa10.59□□□□□ -0.71
NUDCD3-204ENST00000464812 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.59□□□□□ -0.71
NUDCD3-204ENST00000464812 IL17RBQ9NRM6 502 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms