RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 TOP6BLQ8N6T0 577 aa6.67□□□□□ -1.34
CLK1-208ENST00000464454 NKD1Q969G9 470 aa6.67□□□□□ -1.34
CLK1-208ENST00000464454 TMEM87BQ96K49 555 aa6.67□□□□□ -1.34
CLK1-208ENST00000464454 DUSP23Q9BVJ7 150 aa6.67□□□□□ -1.34
CLK1-208ENST00000464454 CCSER2Q9H7U1 834 aa6.67□□□□□ -1.34
CLK1-208ENST00000464454 UBP1Q9NZI7 540 aa6.67□□□□□ -1.34
CLK1-208ENST00000464454 POLR3KQ9Y2Y1 108 aaPredicted RBP6.67□□□□□ -1.34
CLK1-208ENST00000464454 PRR19A6NJB7 356 aa6.66□□□□□ -1.34
CLK1-208ENST00000464454 GRIN3BO60391 1043 aa6.66□□□□□ -1.34
CLK1-208ENST00000464454 COBLO75128 1261 aa6.66□□□□□ -1.34
CLK1-208ENST00000464454 HTR3BO95264 441 aa6.66□□□□□ -1.34
CLK1-208ENST00000464454 TGFB1P01137 390 aa6.66□□□□□ -1.34
CLK1-208ENST00000464454 CRKP46108 304 aa6.66□□□□□ -1.34
CLK1-208ENST00000464454 NKG7Q16617 165 aa6.66□□□□□ -1.34
CLK1-208ENST00000464454 SEZ6Q53EL9 994 aa6.66□□□□□ -1.34
CLK1-208ENST00000464454 C9orf131Q5VYM1 1079 aa6.66□□□□□ -1.34
CLK1-208ENST00000464454 SLITRK4Q8IW52 837 aa6.66□□□□□ -1.34
CLK1-208ENST00000464454 ACSF2Q96CM8 615 aaPredicted RBP6.66□□□□□ -1.34
CLK1-208ENST00000464454 EAF1Q96JC9 268 aaPredicted RBP6.66□□□□□ -1.34
CLK1-208ENST00000464454 BRMS1Q9HCU9 246 aa6.66□□□□□ -1.34
CLK1-208ENST00000464454 TJP2Q9UDY2 1190 aa6.66□□□□□ -1.34
CLK1-208ENST00000464454 GTF2IRD1Q9UHL9 959 aa6.66□□□□□ -1.34
CLK1-208ENST00000464454 CORINQ9Y5Q5 1042 aa6.66□□□□□ -1.34
CLK1-208ENST00000464454 CYP26A1O43174 497 aa6.65□□□□□ -1.34
CLK1-208ENST00000464454 ATE1O95260 518 aa6.65□□□□□ -1.34
CLK1-208ENST00000464454 FOSL1P15407 271 aa6.65□□□□□ -1.34
CLK1-208ENST00000464454 ERCC5P28715 1186 aaPredicted RBP6.65□□□□□ -1.34
CLK1-208ENST00000464454 MCM4P33991 863 aa6.65□□□□□ -1.34
CLK1-208ENST00000464454 COL9A2Q14055 689 aaPredicted RBP6.65□□□□□ -1.34
CLK1-208ENST00000464454 PRAMEF13Q5VWM6 474 aa6.65□□□□□ -1.34
CLK1-208ENST00000464454 FAM13CQ8NE31 585 aa6.65□□□□□ -1.34
CLK1-208ENST00000464454 EHMT1Q9H9B1 1298 aa6.65□□□□□ -1.34
CLK1-208ENST00000464454 REV1Q9UBZ9 1251 aa6.65□□□□□ -1.34
CLK1-208ENST00000464454 PCDHB14Q9Y5E9 798 aa6.65□□□□□ -1.34
CLK1-208ENST00000464454 SCO2A0A1W2PP80 73 aa6.64□□□□□ -1.35
CLK1-208ENST00000464454 IMPDH2P12268 514 aa6.64□□□□□ -1.35
CLK1-208ENST00000464454 PAK2Q13177 524 aa6.64□□□□□ -1.35
CLK1-208ENST00000464454 ARHGAP27Q6ZUM4 889 aa6.64□□□□□ -1.35
CLK1-208ENST00000464454 SLFN12Q8IYM2 578 aa6.64□□□□□ -1.35
CLK1-208ENST00000464454 GPRASP2Q96D09 838 aa6.64□□□□□ -1.35
CLK1-208ENST00000464454 COX4I2Q96KJ9 171 aa6.64□□□□□ -1.35
CLK1-208ENST00000464454 MIPEPQ99797 713 aa6.64□□□□□ -1.35
CLK1-208ENST00000464454 KRTAP9-2Q9BYQ4 174 aa6.64□□□□□ -1.35
CLK1-208ENST00000464454 MKNK2Q9HBH9 465 aa6.64□□□□□ -1.35
CLK1-208ENST00000464454 LEFTY1O75610 366 aa6.63□□□□□ -1.35
CLK1-208ENST00000464454 CYP7A1P22680 504 aa6.63□□□□□ -1.35
CLK1-208ENST00000464454 RAD51AP2Q09MP3 1159 aa6.63□□□□□ -1.35
CLK1-208ENST00000464454 LRRFIP1Q32MZ4 808 aaKnown RBP6.63□□□□□ -1.35
CLK1-208ENST00000464454 LETMD1Q6P1Q0 360 aa6.63□□□□□ -1.35
CLK1-208ENST00000464454 SHISA5Q8N114 240 aa6.63□□□□□ -1.35
CLK1-208ENST00000464454 RASGRP4Q8TDF6 673 aa6.63□□□□□ -1.35
CLK1-208ENST00000464454 CYB5D2Q8WUJ1 264 aa6.63□□□□□ -1.35
CLK1-208ENST00000464454 LRRC4CQ9HCJ2 640 aa6.63□□□□□ -1.35
CLK1-208ENST00000464454 PRDM5Q9NQX1 630 aaPredicted RBP6.63□□□□□ -1.35
CLK1-208ENST00000464454 GMIPQ9P107 970 aa6.63□□□□□ -1.35
CLK1-208ENST00000464454 KLHL3Q9UH77 587 aa6.63□□□□□ -1.35
CLK1-208ENST00000464454 MAPK8IP1Q9UQF2 711 aa6.63□□□□□ -1.35
CLK1-208ENST00000464454 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.62□□□□□ -1.35
CLK1-208ENST00000464454 IGF2BP3O00425 579 aaKnown RBP eCLIP6.62□□□□□ -1.35
CLK1-208ENST00000464454 SLITRK5O94991 958 aa6.62□□□□□ -1.35
CLK1-208ENST00000464454 ETV3P41162 512 aa6.62□□□□□ -1.35
CLK1-208ENST00000464454 GJA8P48165 433 aa6.62□□□□□ -1.35
CLK1-208ENST00000464454 CD97P48960 835 aa6.62□□□□□ -1.35
CLK1-208ENST00000464454 GNL2Q13823 731 aaKnown RBP6.62□□□□□ -1.35
CLK1-208ENST00000464454 LRP8Q14114 963 aa6.62□□□□□ -1.35
CLK1-208ENST00000464454 GK5Q6ZS86 529 aa6.62□□□□□ -1.35
CLK1-208ENST00000464454 DPH2Q9BQC3 489 aaPredicted RBP6.62□□□□□ -1.35
CLK1-208ENST00000464454 TPX2Q9ULW0 747 aaKnown RBP6.62□□□□□ -1.35
CLK1-208ENST00000464454 INPP5FQ9Y2H2 1132 aa6.62□□□□□ -1.35
CLK1-208ENST00000464454 EOMESO95936 686 aa6.61□□□□□ -1.35
CLK1-208ENST00000464454 XAGE3Q8WTP9 111 aa6.61□□□□□ -1.35
CLK1-208ENST00000464454 ACBD3Q9H3P7 528 aa6.61□□□□□ -1.35
CLK1-208ENST00000464454 ZFP64Q9NPA5 681 aa6.61□□□□□ -1.35
CLK1-208ENST00000464454 GNAT3A8MTJ3 354 aa6.6□□□□□ -1.35
CLK1-208ENST00000464454 KIAA1324LA8MWY0 1029 aaPredicted RBP6.6□□□□□ -1.35
CLK1-208ENST00000464454 CLCQ05315 142 aa6.6□□□□□ -1.35
CLK1-208ENST00000464454 SFRP5Q5T4F7 317 aa6.6□□□□□ -1.35
CLK1-208ENST00000464454 ARTNQ5T4W7 220 aa6.6□□□□□ -1.35
CLK1-208ENST00000464454 NBPF11Q86T75 865 aa6.6□□□□□ -1.35
CLK1-208ENST00000464454 PHACTR4Q8IZ21 702 aa6.6□□□□□ -1.35
CLK1-208ENST00000464454 CCDC74BQ96LY2 380 aa6.6□□□□□ -1.35
CLK1-208ENST00000464454 FERD3LQ96RJ6 166 aa6.6□□□□□ -1.35
CLK1-208ENST00000464454 PCMTD2Q9NV79 361 aa6.6□□□□□ -1.35
CLK1-208ENST00000464454 ZNRF3Q9ULT6 936 aa6.6□□□□□ -1.35
CLK1-208ENST00000464454 KRTAP9-6A0A140TA67 174 aa6.59□□□□□ -1.35
CLK1-208ENST00000464454 SLC22A31A6NKX4 558 aa6.59□□□□□ -1.35
CLK1-208ENST00000464454 MEIS3P2A8K0S8 358 aa6.59□□□□□ -1.35
CLK1-208ENST00000464454 UPK3BL1B0FP48 263 aa6.59□□□□□ -1.35
CLK1-208ENST00000464454 UPK3BL2E5RIL1 263 aa6.59□□□□□ -1.35
CLK1-208ENST00000464454 CEACAM5P06731 702 aa6.59□□□□□ -1.35
CLK1-208ENST00000464454 RAG1P15918 1043 aa6.59□□□□□ -1.35
CLK1-208ENST00000464454 SSTR4P31391 388 aa6.59□□□□□ -1.35
CLK1-208ENST00000464454 TNNI2P48788 182 aa6.59□□□□□ -1.35
CLK1-208ENST00000464454 CHMP4BP1P59074 171 aa6.59□□□□□ -1.35
CLK1-208ENST00000464454 MSMPQ1L6U9 139 aa6.59□□□□□ -1.35
CLK1-208ENST00000464454 C22orf34Q6ZV56 151 aa6.59□□□□□ -1.35
CLK1-208ENST00000464454 VPS37DQ86XT2 251 aa6.59□□□□□ -1.35
CLK1-208ENST00000464454 DTX1Q86Y01 620 aa6.59□□□□□ -1.35
CLK1-208ENST00000464454 NETO1Q8TDF5 533 aa6.59□□□□□ -1.35
CLK1-208ENST00000464454 TMEM40Q8WWA1 233 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms