RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 LRP2BPQ9P2M1 347 aa16.39■□□□□ 0.21
MRPL55-224ENST00000464148 MDM2Q00987 491 aaPredicted RBP16.38■□□□□ 0.21
MRPL55-224ENST00000464148 CACNB2Q08289 660 aaPredicted RBP16.38■□□□□ 0.21
MRPL55-224ENST00000464148 CRACR2BQ8N4Y2 399 aaPredicted RBP16.38■□□□□ 0.21
MRPL55-224ENST00000464148 DHX36Q9H2U1 1008 aaKnown RBP16.38■□□□□ 0.21
MRPL55-224ENST00000464148 TXNRD2Q9NNW7 524 aa16.38■□□□□ 0.21
MRPL55-224ENST00000464148 DNAH12Q6ZR08 3092 aa16.37■□□□□ 0.21
MRPL55-224ENST00000464148 C19orf81C9J6K1 198 aa16.37■□□□□ 0.21
MRPL55-224ENST00000464148 BAG3O95817 575 aa16.37■□□□□ 0.21
MRPL55-224ENST00000464148 COL6A1P12109 1028 aa16.37■□□□□ 0.21
MRPL55-224ENST00000464148 CCND3P30281 292 aaPredicted RBP16.37■□□□□ 0.21
MRPL55-224ENST00000464148 RGS2P41220 211 aa16.37■□□□□ 0.21
MRPL55-224ENST00000464148 PAGR1Q9BTK6 254 aa16.37■□□□□ 0.21
MRPL55-224ENST00000464148 RBPJLQ9UBG7 517 aa16.37■□□□□ 0.21
MRPL55-224ENST00000464148 LAMA2P24043 3122 aaKnown RBP16.36■□□□□ 0.21
MRPL55-224ENST00000464148 USP17L10C9JJH3 530 aa16.36■□□□□ 0.21
MRPL55-224ENST00000464148 ERVK-9P63128 1117 aa16.36■□□□□ 0.21
MRPL55-224ENST00000464148 ERVK-24P63145 666 aa16.36■□□□□ 0.21
MRPL55-224ENST00000464148 CCL14Q16627 93 aa16.36■□□□□ 0.21
MRPL55-224ENST00000464148 LRRC26Q2I0M4 334 aa16.36■□□□□ 0.21
MRPL55-224ENST00000464148 AATFQ9NY61 560 aaKnown RBP eCLIP16.36■□□□□ 0.21
MRPL55-224ENST00000464148 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.36■□□□□ 0.21
MRPL55-224ENST00000464148 GDF11O95390 407 aa16.35■□□□□ 0.21
MRPL55-224ENST00000464148 GNAI3P08754 354 aa16.35■□□□□ 0.21
MRPL55-224ENST00000464148 PLCG2P16885 1265 aa16.35■□□□□ 0.21
MRPL55-224ENST00000464148 ARID4AP29374 1257 aaPredicted RBP16.35■□□□□ 0.21
MRPL55-224ENST00000464148 JAG1P78504 1218 aa16.35■□□□□ 0.21
MRPL55-224ENST00000464148 Q3C1V9 767 aa16.35■□□□□ 0.21
MRPL55-224ENST00000464148 LHX8Q68G74 356 aa16.35■□□□□ 0.21
MRPL55-224ENST00000464148 NAA16Q6N069 864 aaPredicted RBP16.35■□□□□ 0.21
MRPL55-224ENST00000464148 GPR142Q7Z601 462 aa16.35■□□□□ 0.21
MRPL55-224ENST00000464148 PLEKHH3Q7Z736 793 aa16.35■□□□□ 0.21
MRPL55-224ENST00000464148 FOXP4Q8IVH2 680 aaPredicted RBP16.35■□□□□ 0.21
MRPL55-224ENST00000464148 MAPKAPK5Q8IW41 473 aa16.35■□□□□ 0.21
MRPL55-224ENST00000464148 GTF3C2Q8WUA4 911 aaPredicted RBP16.35■□□□□ 0.21
MRPL55-224ENST00000464148 TGFBRAP1Q8WUH2 860 aa16.35■□□□□ 0.21
MRPL55-224ENST00000464148 CDCA7LQ96GN5 454 aa16.35■□□□□ 0.21
MRPL55-224ENST00000464148 APBA2Q99767 749 aa16.35■□□□□ 0.21
MRPL55-224ENST00000464148 LBHD1Q9BQE6 289 aaPredicted RBP16.35■□□□□ 0.21
MRPL55-224ENST00000464148 PORCNQ9H237 461 aa16.35■□□□□ 0.21
MRPL55-224ENST00000464148 SIPA1L1O43166 1804 aa16.34■□□□□ 0.21
MRPL55-224ENST00000464148 UQCRFS1P1P0C7P4 283 aa16.34■□□□□ 0.21
MRPL55-224ENST00000464148 MCAMP43121 646 aa16.34■□□□□ 0.21
MRPL55-224ENST00000464148 MORN1Q5T089 497 aa16.34■□□□□ 0.21
MRPL55-224ENST00000464148 USP6NLQ92738 828 aa16.34■□□□□ 0.21
MRPL55-224ENST00000464148 GLRX3O76003 335 aaKnown RBP16.33■□□□□ 0.2
MRPL55-224ENST00000464148 G3BP1Q13283 466 aaKnown RBP eCLIP16.33■□□□□ 0.2
MRPL55-224ENST00000464148 MTX1Q13505 466 aa16.33■□□□□ 0.2
MRPL55-224ENST00000464148 SHROOM1Q2M3G4 852 aaPredicted RBP16.33■□□□□ 0.2
MRPL55-224ENST00000464148 WDR78Q5VTH9 848 aa16.33■□□□□ 0.2
MRPL55-224ENST00000464148 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.33■□□□□ 0.2
MRPL55-224ENST00000464148 COL25A1Q9BXS0 654 aaPredicted RBP16.33■□□□□ 0.2
MRPL55-224ENST00000464148 SENP6Q9GZR1 1112 aaPredicted RBP16.33■□□□□ 0.2
MRPL55-224ENST00000464148 DNAJC18Q9H819 358 aa16.33■□□□□ 0.2
MRPL55-224ENST00000464148 SNRKQ9NRH2 765 aa16.33■□□□□ 0.2
MRPL55-224ENST00000464148 GINM1Q9NU53 330 aa16.33■□□□□ 0.2
MRPL55-224ENST00000464148 PALD1Q9ULE6 856 aa16.33■□□□□ 0.2
MRPL55-224ENST00000464148 ZBTB21Q9ULJ3 1066 aa16.33■□□□□ 0.2
MRPL55-224ENST00000464148 FLT1P17948 1338 aa16.33■□□□□ 0.2
MRPL55-224ENST00000464148 CT47B1P0C2W7 299 aaPredicted RBP16.32■□□□□ 0.2
MRPL55-224ENST00000464148 MAP2K5Q13163 448 aa16.32■□□□□ 0.2
MRPL55-224ENST00000464148 MFSD14CQ5VZR4 134 aa16.32■□□□□ 0.2
MRPL55-224ENST00000464148 USP17L2Q6R6M4 530 aa16.32■□□□□ 0.2
MRPL55-224ENST00000464148 EDC3Q96F86 508 aaKnown RBP16.32■□□□□ 0.2
MRPL55-224ENST00000464148 FAM161BQ96MY7 647 aa16.32■□□□□ 0.2
MRPL55-224ENST00000464148 EMILIN3Q9NT22 766 aa16.32■□□□□ 0.2
MRPL55-224ENST00000464148 SAP30BPQ9UHR5 308 aaKnown RBP16.32■□□□□ 0.2
MRPL55-224ENST00000464148 MAST2Q6P0Q8 1798 aa16.31■□□□□ 0.2
MRPL55-224ENST00000464148 POTEB2H3BUK9 544 aa16.31■□□□□ 0.2
MRPL55-224ENST00000464148 HLA-DOAP06340 250 aa16.31■□□□□ 0.2
MRPL55-224ENST00000464148 CNGA1P29973 690 aa16.31■□□□□ 0.2
MRPL55-224ENST00000464148 CCNA1P78396 465 aa16.31■□□□□ 0.2
MRPL55-224ENST00000464148 ZYXQ15942 572 aaKnown RBP16.31■□□□□ 0.2
MRPL55-224ENST00000464148 TTC39AQ5SRH9 613 aa16.31■□□□□ 0.2
MRPL55-224ENST00000464148 FAM109BQ6ICB4 259 aaPredicted RBP16.31■□□□□ 0.2
MRPL55-224ENST00000464148 ATF7IPQ6VMQ6 1270 aa16.31■□□□□ 0.2
MRPL55-224ENST00000464148 METTL16Q86W50 562 aaKnown RBP16.31■□□□□ 0.2
MRPL55-224ENST00000464148 FEZ1Q99689 392 aa16.31■□□□□ 0.2
MRPL55-224ENST00000464148 PRKAG2Q9UGJ0 569 aa16.31■□□□□ 0.2
MRPL55-224ENST00000464148 NDUFB9Q9Y6M9 179 aa16.31■□□□□ 0.2
MRPL55-224ENST00000464148 ATN1P54259 1190 aaPredicted RBP16.3■□□□□ 0.2
MRPL55-224ENST00000464148 PPP4CP60510 307 aa16.3■□□□□ 0.2
MRPL55-224ENST00000464148 GUCD1Q96NT3 240 aa16.3■□□□□ 0.2
MRPL55-224ENST00000464148 RABGAP1Q9Y3P9 1069 aa16.3■□□□□ 0.2
MRPL55-224ENST00000464148 FRMPD3Q5JV73 1810 aa16.3■□□□□ 0.2
MRPL55-224ENST00000464148 CDK5RAP2Q96SN8 1893 aa16.29■□□□□ 0.2
MRPL55-224ENST00000464148 USP17L15C9J2P7 530 aa16.29■□□□□ 0.2
MRPL55-224ENST00000464148 USP17L13C9JLJ4 530 aa16.29■□□□□ 0.2
MRPL55-224ENST00000464148 USP17L11C9JVI0 530 aa16.29■□□□□ 0.2
MRPL55-224ENST00000464148 USP17L18D6R9N7 530 aa16.29■□□□□ 0.2
MRPL55-224ENST00000464148 USP17L22D6RA61 530 aa16.29■□□□□ 0.2
MRPL55-224ENST00000464148 USP17L17D6RBQ6 530 aa16.29■□□□□ 0.2
MRPL55-224ENST00000464148 USP17L19D6RCP7 530 aa16.29■□□□□ 0.2
MRPL55-224ENST00000464148 USP17L20D6RJB6 530 aa16.29■□□□□ 0.2
MRPL55-224ENST00000464148 GH2P01242 217 aa16.29■□□□□ 0.2
MRPL55-224ENST00000464148 ATP2B2Q01814 1243 aa16.29■□□□□ 0.2
MRPL55-224ENST00000464148 USP17L24Q0WX57 530 aa16.29■□□□□ 0.2
MRPL55-224ENST00000464148 CCDC158Q5M9N0 1113 aa16.29■□□□□ 0.2
MRPL55-224ENST00000464148 ZNF697Q5TEC3 545 aa16.29■□□□□ 0.2
MRPL55-224ENST00000464148 POTEEQ6S8J3 1075 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms