RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 TMOD4Q9NZQ9 345 aa21.23■□□□□ 0.99
HMGN1-210ENST00000464078 MYO5AQ9Y4I1 1855 aaKnown RBP21.23■□□□□ 0.99
HMGN1-210ENST00000464078 HERVK_113P62684 666 aa21.22■□□□□ 0.99
HMGN1-210ENST00000464078 JAG1P78504 1218 aa21.22■□□□□ 0.99
HMGN1-210ENST00000464078 ADGRA1Q86SQ6 560 aa21.22■□□□□ 0.99
HMGN1-210ENST00000464078 FOXP4Q8IVH2 680 aaPredicted RBP21.22■□□□□ 0.99
HMGN1-210ENST00000464078 ZNF512BQ96KM6 892 aaPredicted RBP21.22■□□□□ 0.99
HMGN1-210ENST00000464078 A0A0C4DFX4 3053 aa21.21■□□□□ 0.99
HMGN1-210ENST00000464078 MAPK4P31152 587 aa21.21■□□□□ 0.99
HMGN1-210ENST00000464078 POLA2Q14181 598 aa21.21■□□□□ 0.99
HMGN1-210ENST00000464078 TNNI3KQ59H18 835 aa21.21■□□□□ 0.99
HMGN1-210ENST00000464078 GPR153Q6NV75 609 aa21.21■□□□□ 0.99
HMGN1-210ENST00000464078 TRMT44Q8IYL2 757 aaKnown RBP21.21■□□□□ 0.99
HMGN1-210ENST00000464078 C7orf61Q8IZ16 206 aa21.21■□□□□ 0.99
HMGN1-210ENST00000464078 GPRC5AQ8NFJ5 357 aa21.21■□□□□ 0.99
HMGN1-210ENST00000464078 GTF3C2Q8WUA4 911 aaPredicted RBP21.21■□□□□ 0.99
HMGN1-210ENST00000464078 P2RX7Q99572 595 aaKnown RBP21.21■□□□□ 0.99
HMGN1-210ENST00000464078 NUDT12Q9BQG2 462 aa21.21■□□□□ 0.99
HMGN1-210ENST00000464078 TXNRD2Q9NNW7 524 aa21.21■□□□□ 0.99
HMGN1-210ENST00000464078 ZBTB21Q9ULJ3 1066 aa21.21■□□□□ 0.99
HMGN1-210ENST00000464078 FPGT-TNNI3KV9GXZ4 949 aa21.21■□□□□ 0.99
HMGN1-210ENST00000464078 USP17L10C9JJH3 530 aa21.2■□□□□ 0.98
HMGN1-210ENST00000464078 CYP2E1P05181 493 aaPredicted RBP21.2■□□□□ 0.98
HMGN1-210ENST00000464078 PRKAR2AP13861 404 aaKnown RBP21.2■□□□□ 0.98
HMGN1-210ENST00000464078 CCDC158Q5M9N0 1113 aa21.2■□□□□ 0.98
HMGN1-210ENST00000464078 TTC39AQ5SRH9 613 aa21.2■□□□□ 0.98
HMGN1-210ENST00000464078 MAPKAPK5Q8IW41 473 aa21.2■□□□□ 0.98
HMGN1-210ENST00000464078 CRACR2BQ8N4Y2 399 aaPredicted RBP21.2■□□□□ 0.98
HMGN1-210ENST00000464078 TGFBRAP1Q8WUH2 860 aa21.2■□□□□ 0.98
HMGN1-210ENST00000464078 USP6NLQ92738 828 aa21.2■□□□□ 0.98
HMGN1-210ENST00000464078 LRCH3Q96II8 777 aa21.2■□□□□ 0.98
HMGN1-210ENST00000464078 C11orf49Q9H6J7 331 aa21.2■□□□□ 0.98
HMGN1-210ENST00000464078 SNRKQ9NRH2 765 aa21.2■□□□□ 0.98
HMGN1-210ENST00000464078 SSH3Q8TE77 659 aa21.19■□□□□ 0.98
HMGN1-210ENST00000464078 DBNDD2Q9BQY9 259 aa21.19■□□□□ 0.98
HMGN1-210ENST00000464078 TRIM34Q9BYJ4 488 aa21.19■□□□□ 0.98
HMGN1-210ENST00000464078 RBPJLQ9UBG7 517 aa21.19■□□□□ 0.98
HMGN1-210ENST00000464078 PALD1Q9ULE6 856 aa21.19■□□□□ 0.98
HMGN1-210ENST00000464078 TNNQ9UQP3 1299 aa21.19■□□□□ 0.98
HMGN1-210ENST00000464078 MYH1P12882 1939 aa21.18■□□□□ 0.98
HMGN1-210ENST00000464078 CYP2B6P20813 491 aa21.18■□□□□ 0.98
HMGN1-210ENST00000464078 ERVK-9P63128 1117 aa21.18■□□□□ 0.98
HMGN1-210ENST00000464078 ERVK-24P63145 666 aa21.18■□□□□ 0.98
HMGN1-210ENST00000464078 PDE3AQ14432 1141 aa21.18■□□□□ 0.98
HMGN1-210ENST00000464078 SHROOM1Q2M3G4 852 aaPredicted RBP21.18■□□□□ 0.98
HMGN1-210ENST00000464078 FRMPD3Q5JV73 1810 aa21.18■□□□□ 0.98
HMGN1-210ENST00000464078 GDF11O95390 407 aa21.17■□□□□ 0.98
HMGN1-210ENST00000464078 HLA-DOAP06340 250 aa21.17■□□□□ 0.98
HMGN1-210ENST00000464078 COL6A1P12109 1028 aa21.17■□□□□ 0.98
HMGN1-210ENST00000464078 ZKSCAN1P17029 563 aaPredicted RBP21.17■□□□□ 0.98
HMGN1-210ENST00000464078 CERS3Q8IU89 383 aa21.17■□□□□ 0.98
HMGN1-210ENST00000464078 C12orf42Q96LP6 360 aa21.17■□□□□ 0.98
HMGN1-210ENST00000464078 ZMYND8Q9ULU4 1186 aaPredicted RBP21.17■□□□□ 0.98
HMGN1-210ENST00000464078 PFASO15067 1338 aa21.17■□□□□ 0.98
HMGN1-210ENST00000464078 CCER2I3L3R5 266 aa21.16■□□□□ 0.98
HMGN1-210ENST00000464078 PEX10O60683 326 aa21.16■□□□□ 0.98
HMGN1-210ENST00000464078 LRIT3Q3SXY7 679 aa21.16■□□□□ 0.98
HMGN1-210ENST00000464078 MORN1Q5T089 497 aa21.16■□□□□ 0.98
HMGN1-210ENST00000464078 FRAT1Q92837 279 aaPredicted RBP21.16■□□□□ 0.98
HMGN1-210ENST00000464078 CLUAP1Q96AJ1 413 aa21.16■□□□□ 0.98
HMGN1-210ENST00000464078 APBA2Q99767 749 aa21.16■□□□□ 0.98
HMGN1-210ENST00000464078 PORCNQ9H237 461 aa21.16■□□□□ 0.98
HMGN1-210ENST00000464078 EMILIN3Q9NT22 766 aa21.16■□□□□ 0.98
HMGN1-210ENST00000464078 BCAR3O75815 825 aa21.15■□□□□ 0.98
HMGN1-210ENST00000464078 RGS2P41220 211 aa21.15■□□□□ 0.98
HMGN1-210ENST00000464078 USP17L2Q6R6M4 530 aa21.15■□□□□ 0.98
HMGN1-210ENST00000464078 POTEEQ6S8J3 1075 aa21.15■□□□□ 0.98
HMGN1-210ENST00000464078 GPR142Q7Z601 462 aa21.15■□□□□ 0.98
HMGN1-210ENST00000464078 SLC17A8Q8NDX2 589 aa21.15■□□□□ 0.98
HMGN1-210ENST00000464078 EHD4Q9H223 541 aa21.15■□□□□ 0.98
HMGN1-210ENST00000464078 PIH1D3Q9NQM4 214 aaKnown RBP21.15■□□□□ 0.98
HMGN1-210ENST00000464078 MAGEA10P43363 369 aaPredicted RBP21.14■□□□□ 0.97
HMGN1-210ENST00000464078 ZAP70P43403 619 aa21.14■□□□□ 0.97
HMGN1-210ENST00000464078 CACNB2Q08289 660 aaPredicted RBP21.14■□□□□ 0.97
HMGN1-210ENST00000464078 OS9Q13438 667 aaPredicted RBP21.14■□□□□ 0.97
HMGN1-210ENST00000464078 TATDN1Q6P1N9 297 aa21.14■□□□□ 0.97
HMGN1-210ENST00000464078 TMED8Q6PL24 325 aaPredicted RBP21.14■□□□□ 0.97
HMGN1-210ENST00000464078 TMEM57Q8N5G2 664 aa21.14■□□□□ 0.97
HMGN1-210ENST00000464078 DBNLQ9UJU6 430 aaKnown RBP21.14■□□□□ 0.97
HMGN1-210ENST00000464078 NOP58Q9Y2X3 529 aaKnown RBP21.14■□□□□ 0.97
HMGN1-210ENST00000464078 ATP8B2P98198 1209 aa21.13■□□□□ 0.97
HMGN1-210ENST00000464078 Q3C1V9 767 aa21.13■□□□□ 0.97
HMGN1-210ENST00000464078 LHX8Q68G74 356 aa21.13■□□□□ 0.97
HMGN1-210ENST00000464078 PLEKHH3Q7Z736 793 aa21.13■□□□□ 0.97
HMGN1-210ENST00000464078 TDHQ8IZJ6 230 aa21.13■□□□□ 0.97
HMGN1-210ENST00000464078 SAP30BPQ9UHR5 308 aaKnown RBP21.13■□□□□ 0.97
HMGN1-210ENST00000464078 RABGAP1Q9Y3P9 1069 aa21.13■□□□□ 0.97
HMGN1-210ENST00000464078 SURF6O75683 361 aaKnown RBP21.12■□□□□ 0.97
HMGN1-210ENST00000464078 GH2P01242 217 aa21.12■□□□□ 0.97
HMGN1-210ENST00000464078 SYN1P17600 705 aa21.12■□□□□ 0.97
HMGN1-210ENST00000464078 ZKSCAN2Q63HK3 967 aa21.12■□□□□ 0.97
HMGN1-210ENST00000464078 CCAR1Q8IX12 1150 aaKnown RBP21.12■□□□□ 0.97
HMGN1-210ENST00000464078 PAGR1Q9BTK6 254 aa21.12■□□□□ 0.97
HMGN1-210ENST00000464078 CYP7A1P22680 504 aa21.11■□□□□ 0.97
HMGN1-210ENST00000464078 DYNLL1P63167 89 aaKnown RBP21.11■□□□□ 0.97
HMGN1-210ENST00000464078 CCNA1P78396 465 aa21.11■□□□□ 0.97
HMGN1-210ENST00000464078 CCL14Q16627 93 aa21.11■□□□□ 0.97
HMGN1-210ENST00000464078 LBX2Q6XYB7 198 aa21.11■□□□□ 0.97
HMGN1-210ENST00000464078 KIAA1683Q9H0B3 1180 aa21.11■□□□□ 0.97
HMGN1-210ENST00000464078 SERPINB13Q9UIV8 391 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms