RNA–Protein interactions for RNA: ENST00000463936.1

RTN4R-204, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-204ENST00000463936 FOXP4Q8IVH2 680 aaPredicted RBP17.6■□□□□ 0.41
RTN4R-204ENST00000463936 MIGA1Q8NAN2 632 aa17.6■□□□□ 0.41
RTN4R-204ENST00000463936 DPF3Q92784 378 aa17.6■□□□□ 0.41
RTN4R-204ENST00000463936 YTHDC1Q96MU7 727 aaKnown RBP17.6■□□□□ 0.41
RTN4R-204ENST00000463936 DEFB118Q96PH6 123 aa17.6■□□□□ 0.41
RTN4R-204ENST00000463936 DHX36Q9H2U1 1008 aaKnown RBP17.6■□□□□ 0.41
RTN4R-204ENST00000463936 RBM27Q9P2N5 1060 aaKnown RBP17.6■□□□□ 0.41
RTN4R-204ENST00000463936 EXOC6BQ9Y2D4 811 aa17.6■□□□□ 0.41
RTN4R-204ENST00000463936 ALPK3Q96L96 1907 aa17.6■□□□□ 0.41
RTN4R-204ENST00000463936 BAG3O95817 575 aa17.59■□□□□ 0.41
RTN4R-204ENST00000463936 MNX1P50219 401 aaPredicted RBP17.59■□□□□ 0.41
RTN4R-204ENST00000463936 Q3C1V9 767 aa17.59■□□□□ 0.41
RTN4R-204ENST00000463936 CHRDL2Q6WN34 429 aa17.59■□□□□ 0.41
RTN4R-204ENST00000463936 NKX2-3Q8TAU0 364 aa17.59■□□□□ 0.41
RTN4R-204ENST00000463936 DIS3LQ8TF46 1054 aaKnown RBP17.59■□□□□ 0.41
RTN4R-204ENST00000463936 CRISPLD2Q9H0B8 497 aa17.59■□□□□ 0.41
RTN4R-204ENST00000463936 EMILIN3Q9NT22 766 aa17.59■□□□□ 0.41
RTN4R-204ENST00000463936 RBPJLQ9UBG7 517 aa17.59■□□□□ 0.41
RTN4R-204ENST00000463936 MORF4L1Q9UBU8 362 aa17.59■□□□□ 0.41
RTN4R-204ENST00000463936 FARP2O94887 1054 aaPredicted RBP17.58■□□□□ 0.4
RTN4R-204ENST00000463936 MS4A1P11836 297 aa17.58■□□□□ 0.4
RTN4R-204ENST00000463936 HOXA7P31268 230 aaPredicted RBP17.58■□□□□ 0.4
RTN4R-204ENST00000463936 TAOK2Q9UL54 1235 aa17.58■□□□□ 0.4
RTN4R-204ENST00000463936 MYH1P12882 1939 aa17.58■□□□□ 0.4
RTN4R-204ENST00000463936 TRIOBPQ9H2D6 2365 aa17.58■□□□□ 0.4
RTN4R-204ENST00000463936 IDH1O75874 414 aaKnown RBP17.57■□□□□ 0.4
RTN4R-204ENST00000463936 PLCG2P16885 1265 aa17.57■□□□□ 0.4
RTN4R-204ENST00000463936 GCLCP48506 637 aaPredicted RBP17.57■□□□□ 0.4
RTN4R-204ENST00000463936 SIRT2Q8IXJ6 389 aa17.57■□□□□ 0.4
RTN4R-204ENST00000463936 MAGEB6Q8N7X4 407 aa17.57■□□□□ 0.4
RTN4R-204ENST00000463936 COA7Q96BR5 231 aa17.57■□□□□ 0.4
RTN4R-204ENST00000463936 TBC1D2Q9BYX2 928 aa17.57■□□□□ 0.4
RTN4R-204ENST00000463936 PNMA3Q9UL41 463 aa17.57■□□□□ 0.4
RTN4R-204ENST00000463936 ZBTB21Q9ULJ3 1066 aa17.57■□□□□ 0.4
RTN4R-204ENST00000463936 ASNSP08243 561 aa17.56■□□□□ 0.4
RTN4R-204ENST00000463936 TATDN1Q6P1N9 297 aa17.56■□□□□ 0.4
RTN4R-204ENST00000463936 RIOK1Q9BRS2 568 aaKnown RBP17.56■□□□□ 0.4
RTN4R-204ENST00000463936 NOL10Q9BSC4 688 aaKnown RBP17.56■□□□□ 0.4
RTN4R-204ENST00000463936 IL1RAPL2Q9NP60 686 aa17.56■□□□□ 0.4
RTN4R-204ENST00000463936 GH2P01242 217 aa17.55■□□□□ 0.4
RTN4R-204ENST00000463936 TFRCP02786 760 aaKnown RBP17.55■□□□□ 0.4
RTN4R-204ENST00000463936 PLCD1P51178 756 aa17.55■□□□□ 0.4
RTN4R-204ENST00000463936 HERVK_113P62684 666 aa17.55■□□□□ 0.4
RTN4R-204ENST00000463936 SLFNL1Q499Z3 407 aa17.55■□□□□ 0.4
RTN4R-204ENST00000463936 TRIB2Q92519 343 aa17.55■□□□□ 0.4
RTN4R-204ENST00000463936 USP6NLQ92738 828 aa17.55■□□□□ 0.4
RTN4R-204ENST00000463936 PAWRQ96IZ0 340 aaKnown RBP17.55■□□□□ 0.4
RTN4R-204ENST00000463936 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.55■□□□□ 0.4
RTN4R-204ENST00000463936 PORCNQ9H237 461 aa17.55■□□□□ 0.4
RTN4R-204ENST00000463936 AS3MTQ9HBK9 375 aa17.55■□□□□ 0.4
RTN4R-204ENST00000463936 USP17L10C9JJH3 530 aa17.54■□□□□ 0.4
RTN4R-204ENST00000463936 CNMDO75829 334 aa17.54■□□□□ 0.4
RTN4R-204ENST00000463936 GUCY1A2P33402 732 aa17.54■□□□□ 0.4
RTN4R-204ENST00000463936 AACSQ86V21 672 aa17.54■□□□□ 0.4
RTN4R-204ENST00000463936 CRACR2BQ8N4Y2 399 aaPredicted RBP17.54■□□□□ 0.4
RTN4R-204ENST00000463936 ACER1Q8TDN7 264 aa17.54■□□□□ 0.4
RTN4R-204ENST00000463936 DDX60LQ5H9U9 1706 aaKnown RBP17.54■□□□□ 0.4
RTN4R-204ENST00000463936 C19orf81C9J6K1 198 aa17.53■□□□□ 0.4
RTN4R-204ENST00000463936 SMIM22K7EJ46 135 aa17.53■□□□□ 0.4
RTN4R-204ENST00000463936 CHGBP05060 677 aa17.53■□□□□ 0.4
RTN4R-204ENST00000463936 CYP2B6P20813 491 aa17.53■□□□□ 0.4
RTN4R-204ENST00000463936 SHMT1P34896 483 aa17.53■□□□□ 0.4
RTN4R-204ENST00000463936 PABPC4Q13310 644 aaKnown RBP eCLIP17.53■□□□□ 0.4
RTN4R-204ENST00000463936 PDE3AQ14432 1141 aa17.53■□□□□ 0.4
RTN4R-204ENST00000463936 C20orf194Q5TEA3 1177 aa17.53■□□□□ 0.4
RTN4R-204ENST00000463936 RHPN1Q8TCX5 695 aa17.53■□□□□ 0.4
RTN4R-204ENST00000463936 EDC3Q96F86 508 aaKnown RBP17.53■□□□□ 0.4
RTN4R-204ENST00000463936 COG6Q9Y2V7 657 aa17.53■□□□□ 0.4
RTN4R-204ENST00000463936 HMGCRP04035 888 aa17.52■□□□□ 0.4
RTN4R-204ENST00000463936 CCL14Q16627 93 aa17.52■□□□□ 0.4
RTN4R-204ENST00000463936 MAP3K21Q5TCX8 1036 aa17.52■□□□□ 0.4
RTN4R-204ENST00000463936 TMOD4Q9NZQ9 345 aa17.52■□□□□ 0.4
RTN4R-204ENST00000463936 LAMA3Q16787 3333 aa17.52■□□□□ 0.39
RTN4R-204ENST00000463936 TCRBV5S4A2TA0A5A2 114 aa17.51■□□□□ 0.39
RTN4R-204ENST00000463936 IGSF3O75054 1194 aa17.51■□□□□ 0.39
RTN4R-204ENST00000463936 IRX3P78415 501 aaPredicted RBP17.51■□□□□ 0.39
RTN4R-204ENST00000463936 ZYXQ15942 572 aaKnown RBP17.51■□□□□ 0.39
RTN4R-204ENST00000463936 MORN1Q5T089 497 aa17.51■□□□□ 0.39
RTN4R-204ENST00000463936 GPRC5AQ8NFJ5 357 aa17.51■□□□□ 0.39
RTN4R-204ENST00000463936 HTATIP2Q9BUP3 242 aa17.51■□□□□ 0.39
RTN4R-204ENST00000463936 DDX19BQ9UMR2 479 aa17.51■□□□□ 0.39
RTN4R-204ENST00000463936 RPTORQ8N122 1335 aa17.5■□□□□ 0.39
RTN4R-204ENST00000463936 USP5P45974 858 aa17.5■□□□□ 0.39
RTN4R-204ENST00000463936 ERVK-9P63128 1117 aa17.5■□□□□ 0.39
RTN4R-204ENST00000463936 ERVK-24P63145 666 aa17.5■□□□□ 0.39
RTN4R-204ENST00000463936 GABPAQ06546 454 aa17.5■□□□□ 0.39
RTN4R-204ENST00000463936 C12orf42Q96LP6 360 aa17.5■□□□□ 0.39
RTN4R-204ENST00000463936 EHD4Q9H223 541 aa17.5■□□□□ 0.39
RTN4R-204ENST00000463936 GINM1Q9NU53 330 aa17.5■□□□□ 0.39
RTN4R-204ENST00000463936 ZBTB40Q9NUA8 1239 aa17.5■□□□□ 0.39
RTN4R-204ENST00000463936 SERPINB13Q9UIV8 391 aa17.5■□□□□ 0.39
RTN4R-204ENST00000463936 A0A1W2PRG0 241 aa17.49■□□□□ 0.39
RTN4R-204ENST00000463936 APBB1O00213 710 aa17.49■□□□□ 0.39
RTN4R-204ENST00000463936 SOX1O00570 391 aaPredicted RBP17.49■□□□□ 0.39
RTN4R-204ENST00000463936 HLA-DOAP06340 250 aa17.49■□□□□ 0.39
RTN4R-204ENST00000463936 CYP2D6P10635 497 aa17.49■□□□□ 0.39
RTN4R-204ENST00000463936 PDE6AP16499 860 aa17.49■□□□□ 0.39
RTN4R-204ENST00000463936 CACNB2Q08289 660 aaPredicted RBP17.49■□□□□ 0.39
RTN4R-204ENST00000463936 KIAA1755Q5JYT7 1200 aa17.49■□□□□ 0.39
RTN4R-204ENST00000463936 USP17L2Q6R6M4 530 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms