RNA–Protein interactions for RNA: ENST00000463914.1

TMEM54-203, Transcript of transmembrane protein 54, humanhuman

TSL 5

Gene TMEM54, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-203ENST00000463914 PRKAR2AP13861 404 aaKnown RBP12.57□□□□□ -0.4
TMEM54-203ENST00000463914 SYN1P17600 705 aa12.57□□□□□ -0.4
TMEM54-203ENST00000463914 BACE1P56817 501 aa12.57□□□□□ -0.4
TMEM54-203ENST00000463914 CRACR2BQ8N4Y2 399 aaPredicted RBP12.57□□□□□ -0.4
TMEM54-203ENST00000463914 ANKLE1Q8NAG6 615 aa12.57□□□□□ -0.4
TMEM54-203ENST00000463914 P2RX7Q99572 595 aaKnown RBP12.57□□□□□ -0.4
TMEM54-203ENST00000463914 DHX36Q9H2U1 1008 aaKnown RBP12.57□□□□□ -0.4
TMEM54-203ENST00000463914 PIH1D3Q9NQM4 214 aaKnown RBP12.57□□□□□ -0.4
TMEM54-203ENST00000463914 TMOD4Q9NZQ9 345 aa12.57□□□□□ -0.4
TMEM54-203ENST00000463914 PALD1Q9ULE6 856 aa12.57□□□□□ -0.4
TMEM54-203ENST00000463914 ZBTB21Q9ULJ3 1066 aa12.57□□□□□ -0.4
TMEM54-203ENST00000463914 SZT2Q5T011 3432 aa12.57□□□□□ -0.4
TMEM54-203ENST00000463914 PFASO15067 1338 aa12.57□□□□□ -0.4
TMEM54-203ENST00000463914 BAG3O95817 575 aa12.56□□□□□ -0.4
TMEM54-203ENST00000463914 CYP2E1P05181 493 aaPredicted RBP12.56□□□□□ -0.4
TMEM54-203ENST00000463914 PLCG2P16885 1265 aa12.56□□□□□ -0.4
TMEM54-203ENST00000463914 CAPN2P17655 700 aa12.56□□□□□ -0.4
TMEM54-203ENST00000463914 ZAP70P43403 619 aa12.56□□□□□ -0.4
TMEM54-203ENST00000463914 PPP4CP60510 307 aa12.56□□□□□ -0.4
TMEM54-203ENST00000463914 HERVK_113P62684 666 aa12.56□□□□□ -0.4
TMEM54-203ENST00000463914 POLA2Q14181 598 aa12.56□□□□□ -0.4
TMEM54-203ENST00000463914 MAP3K21Q5TCX8 1036 aa12.56□□□□□ -0.4
TMEM54-203ENST00000463914 TMEM57Q8N5G2 664 aa12.56□□□□□ -0.4
TMEM54-203ENST00000463914 SOCS4Q8WXH5 440 aa12.56□□□□□ -0.4
TMEM54-203ENST00000463914 GDF15Q99988 308 aa12.56□□□□□ -0.4
TMEM54-203ENST00000463914 PORCNQ9H237 461 aa12.56□□□□□ -0.4
TMEM54-203ENST00000463914 C11orf49Q9H6J7 331 aa12.56□□□□□ -0.4
TMEM54-203ENST00000463914 C1orf115Q9H7X2 142 aa12.56□□□□□ -0.4
TMEM54-203ENST00000463914 TLR7Q9NYK1 1049 aaKnown RBP12.56□□□□□ -0.4
TMEM54-203ENST00000463914 NAV1Q8NEY1 1877 aa12.55□□□□□ -0.4
TMEM54-203ENST00000463914 IPO8O15397 1037 aaKnown RBP12.55□□□□□ -0.4
TMEM54-203ENST00000463914 ZKSCAN1P17029 563 aaPredicted RBP12.55□□□□□ -0.4
TMEM54-203ENST00000463914 HOXA7P31268 230 aaPredicted RBP12.55□□□□□ -0.4
TMEM54-203ENST00000463914 DYNLL1P63167 89 aaKnown RBP12.55□□□□□ -0.4
TMEM54-203ENST00000463914 OS9Q13438 667 aaPredicted RBP12.55□□□□□ -0.4
TMEM54-203ENST00000463914 POTEEQ6S8J3 1075 aa12.55□□□□□ -0.4
TMEM54-203ENST00000463914 METTL16Q86W50 562 aaKnown RBP12.55□□□□□ -0.4
TMEM54-203ENST00000463914 GPRC5AQ8NFJ5 357 aa12.55□□□□□ -0.4
TMEM54-203ENST00000463914 NUDT12Q9BQG2 462 aa12.55□□□□□ -0.4
TMEM54-203ENST00000463914 PAGR1Q9BTK6 254 aa12.55□□□□□ -0.4
TMEM54-203ENST00000463914 TRIM34Q9BYJ4 488 aa12.55□□□□□ -0.4
TMEM54-203ENST00000463914 NBPF3Q9H094 633 aa12.55□□□□□ -0.4
TMEM54-203ENST00000463914 GPR108Q9NPR9 543 aa12.55□□□□□ -0.4
TMEM54-203ENST00000463914 DBNLQ9UJU6 430 aaKnown RBP12.55□□□□□ -0.4
TMEM54-203ENST00000463914 OGDHLQ9ULD0 1010 aa12.55□□□□□ -0.4
TMEM54-203ENST00000463914 C19orf81C9J6K1 198 aa12.54□□□□□ -0.4
TMEM54-203ENST00000463914 USP17L10C9JJH3 530 aa12.54□□□□□ -0.4
TMEM54-203ENST00000463914 MAGEA10P43363 369 aaPredicted RBP12.54□□□□□ -0.4
TMEM54-203ENST00000463914 PDE3AQ14432 1141 aa12.54□□□□□ -0.4
TMEM54-203ENST00000463914 ZYXQ15942 572 aaKnown RBP12.54□□□□□ -0.4
TMEM54-203ENST00000463914 CCL14Q16627 93 aa12.54□□□□□ -0.4
TMEM54-203ENST00000463914 Q3C1V9 767 aa12.54□□□□□ -0.4
TMEM54-203ENST00000463914 CCDC158Q5M9N0 1113 aa12.54□□□□□ -0.4
TMEM54-203ENST00000463914 EMILIN3Q9NT22 766 aa12.54□□□□□ -0.4
TMEM54-203ENST00000463914 RBPJLQ9UBG7 517 aa12.54□□□□□ -0.4
TMEM54-203ENST00000463914 SURF6O75683 361 aaKnown RBP12.53□□□□□ -0.4
TMEM54-203ENST00000463914 GH2P01242 217 aa12.53□□□□□ -0.4
TMEM54-203ENST00000463914 HLA-DOAP06340 250 aa12.53□□□□□ -0.4
TMEM54-203ENST00000463914 XRCC5P13010 732 aaKnown RBP12.53□□□□□ -0.4
TMEM54-203ENST00000463914 CYP7A1P22680 504 aa12.53□□□□□ -0.4
TMEM54-203ENST00000463914 CCND3P30281 292 aaPredicted RBP12.53□□□□□ -0.4
TMEM54-203ENST00000463914 MAPK4P31152 587 aa12.53□□□□□ -0.4
TMEM54-203ENST00000463914 ERVK-9P63128 1117 aa12.53□□□□□ -0.4
TMEM54-203ENST00000463914 ERVK-24P63145 666 aa12.53□□□□□ -0.4
TMEM54-203ENST00000463914 FOXP4Q8IVH2 680 aaPredicted RBP12.53□□□□□ -0.4
TMEM54-203ENST00000463914 MIGA1Q8NAN2 632 aa12.53□□□□□ -0.4
TMEM54-203ENST00000463914 SSH3Q8TE77 659 aa12.53□□□□□ -0.4
TMEM54-203ENST00000463914 USP6NLQ92738 828 aa12.53□□□□□ -0.4
TMEM54-203ENST00000463914 FEZ1Q99689 392 aa12.53□□□□□ -0.4
TMEM54-203ENST00000463914 APBA2Q99767 749 aa12.53□□□□□ -0.4
TMEM54-203ENST00000463914 NDUFB9Q9Y6M9 179 aa12.53□□□□□ -0.4
TMEM54-203ENST00000463914 IDH1O75874 414 aaKnown RBP12.52□□□□□ -0.41
TMEM54-203ENST00000463914 BMP8BP34820 402 aa12.52□□□□□ -0.41
TMEM54-203ENST00000463914 CACNB2Q08289 660 aaPredicted RBP12.52□□□□□ -0.41
TMEM54-203ENST00000463914 MORN1Q5T089 497 aa12.52□□□□□ -0.41
TMEM54-203ENST00000463914 ZKSCAN2Q63HK3 967 aa12.52□□□□□ -0.41
TMEM54-203ENST00000463914 Q7L0L9 218 aa12.52□□□□□ -0.41
TMEM54-203ENST00000463914 GPR142Q7Z601 462 aa12.52□□□□□ -0.41
TMEM54-203ENST00000463914 ZNF512BQ96KM6 892 aaPredicted RBP12.52□□□□□ -0.41
TMEM54-203ENST00000463914 GINM1Q9NU53 330 aa12.52□□□□□ -0.41
TMEM54-203ENST00000463914 CNMDO75829 334 aa12.51□□□□□ -0.41
TMEM54-203ENST00000463914 COL6A1P12109 1028 aa12.51□□□□□ -0.41
TMEM54-203ENST00000463914 RGS2P41220 211 aa12.51□□□□□ -0.41
TMEM54-203ENST00000463914 ATP8B2P98198 1209 aa12.51□□□□□ -0.41
TMEM54-203ENST00000463914 USP17L2Q6R6M4 530 aa12.51□□□□□ -0.41
TMEM54-203ENST00000463914 PLEKHH3Q7Z736 793 aa12.51□□□□□ -0.41
TMEM54-203ENST00000463914 CCAR1Q8IX12 1150 aaKnown RBP12.51□□□□□ -0.41
TMEM54-203ENST00000463914 SLC17A8Q8NDX2 589 aa12.51□□□□□ -0.41
TMEM54-203ENST00000463914 GTF3C2Q8WUA4 911 aaPredicted RBP12.51□□□□□ -0.41
TMEM54-203ENST00000463914 EAF2Q96CJ1 260 aaPredicted RBP12.51□□□□□ -0.41
TMEM54-203ENST00000463914 CCDC8Q9H0W5 538 aaPredicted RBP12.51□□□□□ -0.41
TMEM54-203ENST00000463914 ANTXR1Q9H6X2 564 aa12.51□□□□□ -0.41
TMEM54-203ENST00000463914 LAMA3Q16787 3333 aa12.5□□□□□ -0.41
TMEM54-203ENST00000463914 CCER2I3L3R5 266 aa12.5□□□□□ -0.41
TMEM54-203ENST00000463914 RLBP1P12271 317 aa12.5□□□□□ -0.41
TMEM54-203ENST00000463914 USP5P45974 858 aa12.5□□□□□ -0.41
TMEM54-203ENST00000463914 MAP2K5Q13163 448 aa12.5□□□□□ -0.41
TMEM54-203ENST00000463914 LRRC26Q2I0M4 334 aa12.5□□□□□ -0.41
TMEM54-203ENST00000463914 LHX8Q68G74 356 aa12.5□□□□□ -0.41
TMEM54-203ENST00000463914 TATDN1Q6P1N9 297 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms