RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 BAG3O95817 575 aa17.83■□□□□ 0.44
SMC1A-204ENST00000463684 CCND3P30281 292 aaPredicted RBP17.83■□□□□ 0.44
SMC1A-204ENST00000463684 ERVK-9P63128 1117 aa17.83■□□□□ 0.44
SMC1A-204ENST00000463684 ERVK-24P63145 666 aa17.83■□□□□ 0.44
SMC1A-204ENST00000463684 SLFN5Q08AF3 891 aa17.83■□□□□ 0.44
SMC1A-204ENST00000463684 LHX8Q68G74 356 aa17.83■□□□□ 0.44
SMC1A-204ENST00000463684 PI16Q6UXB8 463 aa17.83■□□□□ 0.44
SMC1A-204ENST00000463684 PLEKHH3Q7Z736 793 aa17.83■□□□□ 0.44
SMC1A-204ENST00000463684 FOXP4Q8IVH2 680 aaPredicted RBP17.83■□□□□ 0.44
SMC1A-204ENST00000463684 CRACR2BQ8N4Y2 399 aaPredicted RBP17.83■□□□□ 0.44
SMC1A-204ENST00000463684 SH3RF3Q8TEJ3 882 aaPredicted RBP17.83■□□□□ 0.44
SMC1A-204ENST00000463684 LBHD1Q9BQE6 289 aaPredicted RBP17.83■□□□□ 0.44
SMC1A-204ENST00000463684 COL25A1Q9BXS0 654 aaPredicted RBP17.83■□□□□ 0.44
SMC1A-204ENST00000463684 GINM1Q9NU53 330 aa17.83■□□□□ 0.44
SMC1A-204ENST00000463684 DDX60LQ5H9U9 1706 aaKnown RBP17.83■□□□□ 0.44
SMC1A-204ENST00000463684 LOC285556D6RIA3 1793 aa17.82■□□□□ 0.44
SMC1A-204ENST00000463684 PLCG2P16885 1265 aa17.82■□□□□ 0.44
SMC1A-204ENST00000463684 Q3C1V9 767 aa17.82■□□□□ 0.44
SMC1A-204ENST00000463684 FAM109BQ6ICB4 259 aaPredicted RBP17.82■□□□□ 0.44
SMC1A-204ENST00000463684 GPR142Q7Z601 462 aa17.82■□□□□ 0.44
SMC1A-204ENST00000463684 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.82■□□□□ 0.44
SMC1A-204ENST00000463684 USP6NLQ92738 828 aa17.82■□□□□ 0.44
SMC1A-204ENST00000463684 MEIS3Q99687 375 aa17.82■□□□□ 0.44
SMC1A-204ENST00000463684 PAGR1Q9BTK6 254 aa17.82■□□□□ 0.44
SMC1A-204ENST00000463684 POTEB2H3BUK9 544 aa17.81■□□□□ 0.44
SMC1A-204ENST00000463684 ARID4AP29374 1257 aaPredicted RBP17.81■□□□□ 0.44
SMC1A-204ENST00000463684 CCL14Q16627 93 aa17.81■□□□□ 0.44
SMC1A-204ENST00000463684 MORN1Q5T089 497 aa17.81■□□□□ 0.44
SMC1A-204ENST00000463684 APBA2Q99767 749 aa17.81■□□□□ 0.44
SMC1A-204ENST00000463684 SENP6Q9GZR1 1112 aaPredicted RBP17.81■□□□□ 0.44
SMC1A-204ENST00000463684 PORCNQ9H237 461 aa17.81■□□□□ 0.44
SMC1A-204ENST00000463684 AATFQ9NY61 560 aaKnown RBP eCLIP17.81■□□□□ 0.44
SMC1A-204ENST00000463684 GLRX3O76003 335 aaKnown RBP17.8■□□□□ 0.44
SMC1A-204ENST00000463684 GNAI3P08754 354 aa17.8■□□□□ 0.44
SMC1A-204ENST00000463684 UQCRFS1P1P0C7P4 283 aa17.8■□□□□ 0.44
SMC1A-204ENST00000463684 MFSD14CQ5VZR4 134 aa17.8■□□□□ 0.44
SMC1A-204ENST00000463684 NAA16Q6N069 864 aaPredicted RBP17.8■□□□□ 0.44
SMC1A-204ENST00000463684 TGFBRAP1Q8WUH2 860 aa17.8■□□□□ 0.44
SMC1A-204ENST00000463684 EDC3Q96F86 508 aaKnown RBP17.8■□□□□ 0.44
SMC1A-204ENST00000463684 GDF11O95390 407 aa17.79■□□□□ 0.44
SMC1A-204ENST00000463684 CCNA1P78396 465 aa17.79■□□□□ 0.44
SMC1A-204ENST00000463684 JAG1P78504 1218 aa17.79■□□□□ 0.44
SMC1A-204ENST00000463684 MAP2K5Q13163 448 aa17.79■□□□□ 0.44
SMC1A-204ENST00000463684 USP17L2Q6R6M4 530 aa17.79■□□□□ 0.44
SMC1A-204ENST00000463684 MAPKAPK5Q8IW41 473 aa17.79■□□□□ 0.44
SMC1A-204ENST00000463684 PRKAG2Q9UGJ0 569 aa17.79■□□□□ 0.44
SMC1A-204ENST00000463684 CT47B1P0C2W7 299 aaPredicted RBP17.78■□□□□ 0.44
SMC1A-204ENST00000463684 CNGA1P29973 690 aa17.78■□□□□ 0.44
SMC1A-204ENST00000463684 MCAMP43121 646 aa17.78■□□□□ 0.44
SMC1A-204ENST00000463684 G3BP1Q13283 466 aaKnown RBP eCLIP17.78■□□□□ 0.44
SMC1A-204ENST00000463684 ATF7IPQ6VMQ6 1270 aa17.78■□□□□ 0.44
SMC1A-204ENST00000463684 METTL16Q86W50 562 aaKnown RBP17.78■□□□□ 0.44
SMC1A-204ENST00000463684 FAM161BQ96MY7 647 aa17.78■□□□□ 0.44
SMC1A-204ENST00000463684 EMILIN3Q9NT22 766 aa17.78■□□□□ 0.44
SMC1A-204ENST00000463684 PALD1Q9ULE6 856 aa17.78■□□□□ 0.44
SMC1A-204ENST00000463684 ZBTB21Q9ULJ3 1066 aa17.78■□□□□ 0.44
SMC1A-204ENST00000463684 RABGAP1Q9Y3P9 1069 aa17.78■□□□□ 0.44
SMC1A-204ENST00000463684 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.78■□□□□ 0.44
SMC1A-204ENST00000463684 UNC80Q8N2C7 3258 aa17.78■□□□□ 0.44
SMC1A-204ENST00000463684 PLXNB2O15031 1838 aa17.77■□□□□ 0.44
SMC1A-204ENST00000463684 MSCO60682 206 aa17.77■□□□□ 0.44
SMC1A-204ENST00000463684 HLA-DOAP06340 250 aa17.77■□□□□ 0.44
SMC1A-204ENST00000463684 PPP4CP60510 307 aa17.77■□□□□ 0.44
SMC1A-204ENST00000463684 MTX1Q13505 466 aa17.77■□□□□ 0.44
SMC1A-204ENST00000463684 ZNF697Q5TEC3 545 aa17.77■□□□□ 0.44
SMC1A-204ENST00000463684 WDR78Q5VTH9 848 aa17.77■□□□□ 0.44
SMC1A-204ENST00000463684 CDCA7LQ96GN5 454 aa17.77■□□□□ 0.44
SMC1A-204ENST00000463684 GUCD1Q96NT3 240 aa17.77■□□□□ 0.44
SMC1A-204ENST00000463684 DNAJC18Q9H819 358 aa17.77■□□□□ 0.44
SMC1A-204ENST00000463684 FLT1P17948 1338 aa17.76■□□□□ 0.43
SMC1A-204ENST00000463684 USP17L15C9J2P7 530 aa17.76■□□□□ 0.43
SMC1A-204ENST00000463684 USP17L13C9JLJ4 530 aa17.76■□□□□ 0.43
SMC1A-204ENST00000463684 USP17L11C9JVI0 530 aa17.76■□□□□ 0.43
SMC1A-204ENST00000463684 USP17L18D6R9N7 530 aa17.76■□□□□ 0.43
SMC1A-204ENST00000463684 USP17L22D6RA61 530 aa17.76■□□□□ 0.43
SMC1A-204ENST00000463684 USP17L17D6RBQ6 530 aa17.76■□□□□ 0.43
SMC1A-204ENST00000463684 USP17L19D6RCP7 530 aa17.76■□□□□ 0.43
SMC1A-204ENST00000463684 USP17L20D6RJB6 530 aa17.76■□□□□ 0.43
SMC1A-204ENST00000463684 ATP2B2Q01814 1243 aa17.76■□□□□ 0.43
SMC1A-204ENST00000463684 USP17L24Q0WX57 530 aa17.76■□□□□ 0.43
SMC1A-204ENST00000463684 SHROOM1Q2M3G4 852 aaPredicted RBP17.76■□□□□ 0.43
SMC1A-204ENST00000463684 DDX20Q9UHI6 824 aaKnown RBP17.76■□□□□ 0.43
SMC1A-204ENST00000463684 IVNS1ABPQ9Y6Y0 642 aa17.76■□□□□ 0.43
SMC1A-204ENST00000463684 CUL9Q8IWT3 2517 aa17.75■□□□□ 0.43
SMC1A-204ENST00000463684 ATAD5Q96QE3 1844 aa17.75■□□□□ 0.43
SMC1A-204ENST00000463684 SLC15A5A6NIM6 579 aa17.75■□□□□ 0.43
SMC1A-204ENST00000463684 ATN1P54259 1190 aaPredicted RBP17.75■□□□□ 0.43
SMC1A-204ENST00000463684 CCDC158Q5M9N0 1113 aa17.75■□□□□ 0.43
SMC1A-204ENST00000463684 TTC39AQ5SRH9 613 aa17.75■□□□□ 0.43
SMC1A-204ENST00000463684 LPAR1Q92633 364 aa17.75■□□□□ 0.43
SMC1A-204ENST00000463684 FEZ1Q99689 392 aa17.75■□□□□ 0.43
SMC1A-204ENST00000463684 SNRKQ9NRH2 765 aa17.75■□□□□ 0.43
SMC1A-204ENST00000463684 SAP30BPQ9UHR5 308 aaKnown RBP17.75■□□□□ 0.43
SMC1A-204ENST00000463684 NDUFB9Q9Y6M9 179 aa17.75■□□□□ 0.43
SMC1A-204ENST00000463684 PTPREP23469 700 aa17.74■□□□□ 0.43
SMC1A-204ENST00000463684 USP14P54578 494 aa17.74■□□□□ 0.43
SMC1A-204ENST00000463684 ZYXQ15942 572 aaKnown RBP17.74■□□□□ 0.43
SMC1A-204ENST00000463684 POTEEQ6S8J3 1075 aa17.74■□□□□ 0.43
SMC1A-204ENST00000463684 FLRT1Q9NZU1 646 aa17.74■□□□□ 0.43
SMC1A-204ENST00000463684 DNM1LO00429 736 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms