RNA–Protein interactions for RNA: ENST00000463632.1

RPA3-206, Transcript of replication protein A3, humanhuman

TSL 5

Gene RPA3, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-206ENST00000463632 WDR18Q9BV38 432 aa15.02■□□□□ -0
RPA3-206ENST00000463632 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.02■□□□□ -0
RPA3-206ENST00000463632 EXOC6BQ9Y2D4 811 aa15.02■□□□□ -0
RPA3-206ENST00000463632 NDUFB9Q9Y6M9 179 aa15.02■□□□□ -0
RPA3-206ENST00000463632 ZBTB7BO15156 539 aaPredicted RBP15.01□□□□□ -0.01
RPA3-206ENST00000463632 RLBP1P12271 317 aa15.01□□□□□ -0.01
RPA3-206ENST00000463632 MAP3K12Q12852 859 aa15.01□□□□□ -0.01
RPA3-206ENST00000463632 SHROOM1Q2M3G4 852 aaPredicted RBP15.01□□□□□ -0.01
RPA3-206ENST00000463632 WDR78Q5VTH9 848 aa15.01□□□□□ -0.01
RPA3-206ENST00000463632 EAF2Q96CJ1 260 aaPredicted RBP15.01□□□□□ -0.01
RPA3-206ENST00000463632 PAWRQ96IZ0 340 aaKnown RBP15.01□□□□□ -0.01
RPA3-206ENST00000463632 HMX1Q9NP08 348 aaPredicted RBP15.01□□□□□ -0.01
RPA3-206ENST00000463632 RBM27Q9P2N5 1060 aaKnown RBP15.01□□□□□ -0.01
RPA3-206ENST00000463632 ZBTB21Q9ULJ3 1066 aa15.01□□□□□ -0.01
RPA3-206ENST00000463632 COL2A1P02458 1487 aaPredicted RBP15.01□□□□□ -0.01
RPA3-206ENST00000463632 PEX10O60683 326 aa15□□□□□ -0.01
RPA3-206ENST00000463632 GH2P01242 217 aa15□□□□□ -0.01
RPA3-206ENST00000463632 HERVK_113P62684 666 aa15□□□□□ -0.01
RPA3-206ENST00000463632 JAG1P78504 1218 aa15□□□□□ -0.01
RPA3-206ENST00000463632 RAB3GAP1Q15042 981 aa15□□□□□ -0.01
RPA3-206ENST00000463632 USP17L2Q6R6M4 530 aa15□□□□□ -0.01
RPA3-206ENST00000463632 NECAB2Q7Z6G3 386 aa15□□□□□ -0.01
RPA3-206ENST00000463632 ERC1Q8IUD2 1116 aa15□□□□□ -0.01
RPA3-206ENST00000463632 MIER1Q8N108 512 aa15□□□□□ -0.01
RPA3-206ENST00000463632 ZNF512BQ96KM6 892 aaPredicted RBP15□□□□□ -0.01
RPA3-206ENST00000463632 NUDT12Q9BQG2 462 aa15□□□□□ -0.01
RPA3-206ENST00000463632 IL1RAPL2Q9NP60 686 aa15□□□□□ -0.01
RPA3-206ENST00000463632 NOP58Q9Y2X3 529 aaKnown RBP15□□□□□ -0.01
RPA3-206ENST00000463632 DOCK2Q92608 1830 aa14.99□□□□□ -0.01
RPA3-206ENST00000463632 POLR3DP05423 398 aaPredicted RBP14.99□□□□□ -0.01
RPA3-206ENST00000463632 TRIM32Q13049 653 aa14.99□□□□□ -0.01
RPA3-206ENST00000463632 CEP85Q6P2H3 762 aa14.99□□□□□ -0.01
RPA3-206ENST00000463632 UBE2Q1Q7Z7E8 422 aa14.99□□□□□ -0.01
RPA3-206ENST00000463632 TTC6Q86TZ1 520 aa14.99□□□□□ -0.01
RPA3-206ENST00000463632 PANK1Q8TE04 598 aa14.99□□□□□ -0.01
RPA3-206ENST00000463632 DNAJC18Q9H819 358 aa14.99□□□□□ -0.01
RPA3-206ENST00000463632 CABP5Q9NP86 173 aa14.99□□□□□ -0.01
RPA3-206ENST00000463632 PAK6Q9NQU5 681 aaPredicted RBP14.99□□□□□ -0.01
RPA3-206ENST00000463632 GINM1Q9NU53 330 aa14.99□□□□□ -0.01
RPA3-206ENST00000463632 CENPFP49454 3210 aa14.99□□□□□ -0.01
RPA3-206ENST00000463632 MKI67P46013 3256 aaKnown RBP14.98□□□□□ -0.01
RPA3-206ENST00000463632 RPTORQ8N122 1335 aa14.98□□□□□ -0.01
RPA3-206ENST00000463632 ZKSCAN1P17029 563 aaPredicted RBP14.98□□□□□ -0.01
RPA3-206ENST00000463632 CAPN2P17655 700 aa14.98□□□□□ -0.01
RPA3-206ENST00000463632 HOXA7P31268 230 aaPredicted RBP14.98□□□□□ -0.01
RPA3-206ENST00000463632 HSP90AB4PQ58FF6 505 aa14.98□□□□□ -0.01
RPA3-206ENST00000463632 CERS3Q8IU89 383 aa14.98□□□□□ -0.01
RPA3-206ENST00000463632 DIS3LQ8TF46 1054 aaKnown RBP14.98□□□□□ -0.01
RPA3-206ENST00000463632 SOCS4Q8WXH5 440 aa14.98□□□□□ -0.01
RPA3-206ENST00000463632 ANTXR1Q9H6X2 564 aa14.98□□□□□ -0.01
RPA3-206ENST00000463632 MORF4L1Q9UBU8 362 aa14.98□□□□□ -0.01
RPA3-206ENST00000463632 SERPINB13Q9UIV8 391 aa14.98□□□□□ -0.01
RPA3-206ENST00000463632 RBBP6Q7Z6E9 1792 aaKnown RBP14.98□□□□□ -0.01
RPA3-206ENST00000463632 MAGEB6P1A0A0J9YX57 407 aa14.97□□□□□ -0.01
RPA3-206ENST00000463632 MPHOSPH10O00566 681 aaKnown RBP14.97□□□□□ -0.01
RPA3-206ENST00000463632 IGSF3O75054 1194 aa14.97□□□□□ -0.01
RPA3-206ENST00000463632 MAPK4P31152 587 aa14.97□□□□□ -0.01
RPA3-206ENST00000463632 ABCB5Q2M3G0 1257 aa14.97□□□□□ -0.01
RPA3-206ENST00000463632 CERKLQ49MI3 558 aaPredicted RBP14.97□□□□□ -0.01
RPA3-206ENST00000463632 C7orf61Q8IZ16 206 aa14.97□□□□□ -0.01
RPA3-206ENST00000463632 GTF3C2Q8WUA4 911 aaPredicted RBP14.97□□□□□ -0.01
RPA3-206ENST00000463632 TRIB2Q92519 343 aa14.97□□□□□ -0.01
RPA3-206ENST00000463632 DNAJC2Q99543 621 aaKnown RBP14.97□□□□□ -0.01
RPA3-206ENST00000463632 TXNRD2Q9NNW7 524 aa14.97□□□□□ -0.01
RPA3-206ENST00000463632 GJD2Q9UKL4 321 aa14.97□□□□□ -0.01
RPA3-206ENST00000463632 IFIT2P09913 472 aaKnown RBP14.96□□□□□ -0.01
RPA3-206ENST00000463632 PRKAR2AP13861 404 aaKnown RBP14.96□□□□□ -0.01
RPA3-206ENST00000463632 ERVK-9P63128 1117 aa14.96□□□□□ -0.01
RPA3-206ENST00000463632 ERVK-24P63145 666 aa14.96□□□□□ -0.01
RPA3-206ENST00000463632 TTF1Q15361 905 aaPredicted RBP14.96□□□□□ -0.01
RPA3-206ENST00000463632 DIEXFQ68CQ4 756 aaKnown RBP14.96□□□□□ -0.01
RPA3-206ENST00000463632 PLEKHH3Q7Z736 793 aa14.96□□□□□ -0.01
RPA3-206ENST00000463632 METTL16Q86W50 562 aaKnown RBP14.96□□□□□ -0.01
RPA3-206ENST00000463632 CLASRPQ8N2M8 674 aaKnown RBP14.96□□□□□ -0.01
RPA3-206ENST00000463632 NBPF3Q9H094 633 aa14.96□□□□□ -0.01
RPA3-206ENST00000463632 CRISPLD2Q9H0B8 497 aa14.96□□□□□ -0.01
RPA3-206ENST00000463632 EMILIN3Q9NT22 766 aa14.96□□□□□ -0.01
RPA3-206ENST00000463632 RBPJLQ9UBG7 517 aa14.96□□□□□ -0.01
RPA3-206ENST00000463632 STAP2Q9UGK3 403 aa14.96□□□□□ -0.01
RPA3-206ENST00000463632 ZMYND8Q9ULU4 1186 aaPredicted RBP14.96□□□□□ -0.01
RPA3-206ENST00000463632 DOCK1Q14185 1865 aa14.95□□□□□ -0.02
RPA3-206ENST00000463632 USP17L15C9J2P7 530 aa14.95□□□□□ -0.02
RPA3-206ENST00000463632 USP17L13C9JLJ4 530 aa14.95□□□□□ -0.02
RPA3-206ENST00000463632 USP17L11C9JVI0 530 aa14.95□□□□□ -0.02
RPA3-206ENST00000463632 USP17L18D6R9N7 530 aa14.95□□□□□ -0.02
RPA3-206ENST00000463632 USP17L22D6RA61 530 aa14.95□□□□□ -0.02
RPA3-206ENST00000463632 USP17L17D6RBQ6 530 aa14.95□□□□□ -0.02
RPA3-206ENST00000463632 USP17L19D6RCP7 530 aa14.95□□□□□ -0.02
RPA3-206ENST00000463632 USP17L20D6RJB6 530 aa14.95□□□□□ -0.02
RPA3-206ENST00000463632 GLRX3O76003 335 aaKnown RBP14.95□□□□□ -0.02
RPA3-206ENST00000463632 MS4A1P11836 297 aa14.95□□□□□ -0.02
RPA3-206ENST00000463632 RGS2P41220 211 aa14.95□□□□□ -0.02
RPA3-206ENST00000463632 USP14P54578 494 aa14.95□□□□□ -0.02
RPA3-206ENST00000463632 CCNA1P78396 465 aa14.95□□□□□ -0.02
RPA3-206ENST00000463632 USP17L24Q0WX57 530 aa14.95□□□□□ -0.02
RPA3-206ENST00000463632 Q3C1V9 767 aa14.95□□□□□ -0.02
RPA3-206ENST00000463632 SLC9C2Q5TAH2 1124 aa14.95□□□□□ -0.02
RPA3-206ENST00000463632 GPR142Q7Z601 462 aa14.95□□□□□ -0.02
RPA3-206ENST00000463632 CRNKL1Q9BZJ0 848 aaKnown RBP14.95□□□□□ -0.02
RPA3-206ENST00000463632 PORCNQ9H237 461 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms