RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 NECAB1Q8N987 351 aa9.98□□□□□ -0.81
SHQ1-203ENST00000463369 FLAD1Q8NFF5 587 aa9.98□□□□□ -0.81
SHQ1-203ENST00000463369 KAZALD1Q96I82 304 aa9.98□□□□□ -0.81
SHQ1-203ENST00000463369 NCAPGQ9BPX3 1015 aa9.98□□□□□ -0.81
SHQ1-203ENST00000463369 SRRTQ9BXP5 876 aaKnown RBP9.98□□□□□ -0.81
SHQ1-203ENST00000463369 BRINP2Q9C0B6 783 aa9.98□□□□□ -0.81
SHQ1-203ENST00000463369 TFCP2L1Q9NZI6 479 aa9.98□□□□□ -0.81
SHQ1-203ENST00000463369 CYP46A1Q9Y6A2 500 aa9.98□□□□□ -0.81
SHQ1-203ENST00000463369 MRPL42Q9Y6G3 142 aaKnown RBP9.98□□□□□ -0.81
SHQ1-203ENST00000463369 A0A1B0GUL7 405 aa9.97□□□□□ -0.81
SHQ1-203ENST00000463369 EFCAB8A8MWE9 144 aa9.97□□□□□ -0.81
SHQ1-203ENST00000463369 TADA3O75528 432 aa9.97□□□□□ -0.81
SHQ1-203ENST00000463369 PCCAP05165 728 aaPredicted RBP9.97□□□□□ -0.81
SHQ1-203ENST00000463369 ACTN2P35609 894 aa9.97□□□□□ -0.81
SHQ1-203ENST00000463369 ETF1P62495 437 aaKnown RBP9.97□□□□□ -0.81
SHQ1-203ENST00000463369 TMEM259Q4ZIN3 620 aa9.97□□□□□ -0.81
SHQ1-203ENST00000463369 DHX40Q8IX18 779 aaKnown RBP9.97□□□□□ -0.81
SHQ1-203ENST00000463369 ZBTB38Q8NAP3 1195 aaPredicted RBP9.97□□□□□ -0.81
SHQ1-203ENST00000463369 BICD2Q8TD16 824 aa9.97□□□□□ -0.81
SHQ1-203ENST00000463369 SUCLG2Q96I99 432 aa9.97□□□□□ -0.81
SHQ1-203ENST00000463369 JAKMIP1Q96N16 626 aaKnown RBP9.97□□□□□ -0.81
SHQ1-203ENST00000463369 MYCBPQ99417 103 aaPredicted RBP9.97□□□□□ -0.81
SHQ1-203ENST00000463369 ADAM21Q9UKJ8 722 aa9.97□□□□□ -0.81
SHQ1-203ENST00000463369 NIP7Q9Y221 180 aaKnown RBP eCLIP9.97□□□□□ -0.81
SHQ1-203ENST00000463369 PHLPP2Q6ZVD8 1323 aa9.97□□□□□ -0.81
SHQ1-203ENST00000463369 CTAGE5O15320 804 aa9.97□□□□□ -0.81
SHQ1-203ENST00000463369 SCNN1AP37088 669 aa9.97□□□□□ -0.81
SHQ1-203ENST00000463369 SLC15A2Q16348 729 aa9.97□□□□□ -0.81
SHQ1-203ENST00000463369 ADCK5Q3MIX3 580 aa9.97□□□□□ -0.81
SHQ1-203ENST00000463369 LDLRAD1Q5T700 205 aa9.97□□□□□ -0.81
SHQ1-203ENST00000463369 TBC1D9BQ66K14 1250 aa9.97□□□□□ -0.81
SHQ1-203ENST00000463369 CC2D1AQ6P1N0 951 aaPredicted RBP9.97□□□□□ -0.81
SHQ1-203ENST00000463369 NBPF11Q86T75 865 aa9.97□□□□□ -0.81
SHQ1-203ENST00000463369 CACTIN-AS1Q8N1I8 211 aa9.97□□□□□ -0.81
SHQ1-203ENST00000463369 MNS1Q8NEH6 495 aa9.97□□□□□ -0.81
SHQ1-203ENST00000463369 TMC2Q8TDI7 906 aa9.97□□□□□ -0.81
SHQ1-203ENST00000463369 JRKLQ9Y4A0 524 aa9.97□□□□□ -0.81
SHQ1-203ENST00000463369 TAF1P21675 1872 aa9.97□□□□□ -0.81
SHQ1-203ENST00000463369 SPEF2Q9C093 1822 aa9.96□□□□□ -0.81
SHQ1-203ENST00000463369 CDHR2Q9BYE9 1310 aa9.96□□□□□ -0.81
SHQ1-203ENST00000463369 MAGEA9P43362 315 aa9.96□□□□□ -0.81
SHQ1-203ENST00000463369 MDM2Q00987 491 aaPredicted RBP9.96□□□□□ -0.81
SHQ1-203ENST00000463369 MTX1Q13505 466 aa9.96□□□□□ -0.81
SHQ1-203ENST00000463369 SUSD4Q5VX71 490 aa9.96□□□□□ -0.81
SHQ1-203ENST00000463369 PPP1R42Q7Z4L9 355 aa9.96□□□□□ -0.81
SHQ1-203ENST00000463369 COL23A1Q86Y22 540 aaPredicted RBP9.96□□□□□ -0.81
SHQ1-203ENST00000463369 CCDC150Q8NCX0 1101 aa9.96□□□□□ -0.81
SHQ1-203ENST00000463369 PI4K2BQ8TCG2 481 aa9.96□□□□□ -0.81
SHQ1-203ENST00000463369 UPF1Q92900 1129 aaKnown RBP eCLIP9.96□□□□□ -0.81
SHQ1-203ENST00000463369 BICC1Q9H694 974 aaKnown RBP9.96□□□□□ -0.81
SHQ1-203ENST00000463369 TRMT112Q9UI30 125 aaKnown RBP9.96□□□□□ -0.81
SHQ1-203ENST00000463369 TPCN1Q9ULQ1 816 aa9.96□□□□□ -0.81
SHQ1-203ENST00000463369 NRXN2Q9P2S2 1712 aa9.96□□□□□ -0.82
SHQ1-203ENST00000463369 PNPLA7Q6ZV29 1317 aa9.96□□□□□ -0.82
SHQ1-203ENST00000463369 S100BP04271 92 aaPredicted RBP9.95□□□□□ -0.82
SHQ1-203ENST00000463369 IVLP07476 585 aa9.95□□□□□ -0.82
SHQ1-203ENST00000463369 GYS1P13807 737 aa9.95□□□□□ -0.82
SHQ1-203ENST00000463369 PDE6BP35913 854 aa9.95□□□□□ -0.82
SHQ1-203ENST00000463369 DHX8Q14562 1220 aaKnown RBP9.95□□□□□ -0.82
SHQ1-203ENST00000463369 RABL6Q3YEC7 729 aaPredicted RBP9.95□□□□□ -0.82
SHQ1-203ENST00000463369 CWC27Q6UX04 472 aaKnown RBP9.95□□□□□ -0.82
SHQ1-203ENST00000463369 NUTM1Q86Y26 1132 aa9.95□□□□□ -0.82
SHQ1-203ENST00000463369 CNTROBQ8N137 903 aa9.95□□□□□ -0.82
SHQ1-203ENST00000463369 SSH3Q8TE77 659 aa9.95□□□□□ -0.82
SHQ1-203ENST00000463369 FAM89AQ96GI7 184 aa9.95□□□□□ -0.82
SHQ1-203ENST00000463369 SETDB2Q96T68 719 aa9.95□□□□□ -0.82
SHQ1-203ENST00000463369 UTP14AQ9BVJ6 771 aaKnown RBP9.95□□□□□ -0.82
SHQ1-203ENST00000463369 PLA2G12BQ9BX93 195 aa9.95□□□□□ -0.82
SHQ1-203ENST00000463369 EMILIN3Q9NT22 766 aa9.95□□□□□ -0.82
SHQ1-203ENST00000463369 STK32BQ9NY57 414 aa9.95□□□□□ -0.82
SHQ1-203ENST00000463369 GRXCR2A6NFK2 248 aa9.95□□□□□ -0.82
SHQ1-203ENST00000463369 LMAN1P49257 510 aa9.95□□□□□ -0.82
SHQ1-203ENST00000463369 FOXO4P98177 505 aa9.95□□□□□ -0.82
SHQ1-203ENST00000463369 LRRFIP1Q32MZ4 808 aaKnown RBP9.95□□□□□ -0.82
SHQ1-203ENST00000463369 TTC31Q49AM3 519 aaPredicted RBP9.95□□□□□ -0.82
SHQ1-203ENST00000463369 EPHA10Q5JZY3 1008 aa9.95□□□□□ -0.82
SHQ1-203ENST00000463369 ZNF746Q6NUN9 644 aaPredicted RBP9.95□□□□□ -0.82
SHQ1-203ENST00000463369 ARMCX5Q6P1M9 558 aa9.95□□□□□ -0.82
SHQ1-203ENST00000463369 HOMER1Q86YM7 354 aa9.95□□□□□ -0.82
SHQ1-203ENST00000463369 GPR161Q8N6U8 529 aaKnown RBP9.95□□□□□ -0.82
SHQ1-203ENST00000463369 CCDC85AQ96PX6 553 aaPredicted RBP9.95□□□□□ -0.82
SHQ1-203ENST00000463369 SPC25Q9HBM1 224 aa9.95□□□□□ -0.82
SHQ1-203ENST00000463369 IL1RAPL2Q9NP60 686 aa9.95□□□□□ -0.82
SHQ1-203ENST00000463369 ANO10Q9NW15 660 aa9.95□□□□□ -0.82
SHQ1-203ENST00000463369 DDX56Q9NY93 547 aaKnown RBP9.95□□□□□ -0.82
SHQ1-203ENST00000463369 DNAI1Q9UI46 699 aa9.95□□□□□ -0.82
SHQ1-203ENST00000463369 CCP110O43303 1012 aa9.94□□□□□ -0.82
SHQ1-203ENST00000463369 NTSR2O95665 410 aa9.94□□□□□ -0.82
SHQ1-203ENST00000463369 EVCP57679 992 aa9.94□□□□□ -0.82
SHQ1-203ENST00000463369 RNF187Q5TA31 235 aaPredicted RBP9.94□□□□□ -0.82
SHQ1-203ENST00000463369 TRIM65Q6PJ69 517 aa9.94□□□□□ -0.82
SHQ1-203ENST00000463369 PACS2Q86VP3 889 aa9.94□□□□□ -0.82
SHQ1-203ENST00000463369 NT5DC4Q86YG4 428 aa9.94□□□□□ -0.82
SHQ1-203ENST00000463369 CCDC34Q96HJ3 373 aa9.94□□□□□ -0.82
SHQ1-203ENST00000463369 SENP7Q9BQF6 1050 aa9.94□□□□□ -0.82
SHQ1-203ENST00000463369 CARD6Q9BX69 1037 aa9.94□□□□□ -0.82
SHQ1-203ENST00000463369 FUT8Q9BYC5 575 aa9.94□□□□□ -0.82
SHQ1-203ENST00000463369 ARFGAP3Q9NP61 516 aa9.94□□□□□ -0.82
SHQ1-203ENST00000463369 ANKRD31Q8N7Z5 1873 aa9.94□□□□□ -0.82
SHQ1-203ENST00000463369 TTC41PQ6P2S7 1318 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms