RNA–Protein interactions for RNA: ENST00000463222.1

VRK2-208, Transcript of vaccinia related kinase 2, humanhuman

TSL 3

Gene VRK2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-208ENST00000463222 HIF3AQ9Y2N7 669 aa6.56□□□□□ -1.36
VRK2-208ENST00000463222 hCG_2014768A0A024R1R8 64 aa6.55□□□□□ -1.36
VRK2-208ENST00000463222 AOC2O75106 756 aa6.55□□□□□ -1.36
VRK2-208ENST00000463222 SLFN14P0C7P3 912 aa6.55□□□□□ -1.36
VRK2-208ENST00000463222 IBSPP21815 317 aaPredicted RBP6.55□□□□□ -1.36
VRK2-208ENST00000463222 GYS2P54840 703 aa6.55□□□□□ -1.36
VRK2-208ENST00000463222 ETF1P62495 437 aaKnown RBP6.55□□□□□ -1.36
VRK2-208ENST00000463222 PDE4BQ07343 736 aa6.55□□□□□ -1.36
VRK2-208ENST00000463222 SSRP1Q08945 709 aaKnown RBP6.55□□□□□ -1.36
VRK2-208ENST00000463222 ZC3H12AQ5D1E8 599 aaKnown RBP6.55□□□□□ -1.36
VRK2-208ENST00000463222 PPM1JQ5JR12 505 aa6.55□□□□□ -1.36
VRK2-208ENST00000463222 THAP3Q8WTV1 239 aaPredicted RBP6.55□□□□□ -1.36
VRK2-208ENST00000463222 PSMG3-AS1Q96PY0 264 aa6.55□□□□□ -1.36
VRK2-208ENST00000463222 WDR18Q9BV38 432 aa6.55□□□□□ -1.36
VRK2-208ENST00000463222 SLKQ9H2G2 1235 aaPredicted RBP6.55□□□□□ -1.36
VRK2-208ENST00000463222 CNNM2Q9H8M5 875 aa6.55□□□□□ -1.36
VRK2-208ENST00000463222 PICK1Q9NRD5 415 aa6.55□□□□□ -1.36
VRK2-208ENST00000463222 TMEM260Q9NX78 707 aa6.55□□□□□ -1.36
VRK2-208ENST00000463222 PPP1R12AO14974 1030 aaPredicted RBP6.54□□□□□ -1.36
VRK2-208ENST00000463222 DNAJC6O75061 913 aa6.54□□□□□ -1.36
VRK2-208ENST00000463222 SPATA31C1P0DKV0 1188 aa6.54□□□□□ -1.36
VRK2-208ENST00000463222 POLR2BP30876 1174 aaKnown RBP6.54□□□□□ -1.36
VRK2-208ENST00000463222 CD68P34810 354 aaPredicted RBP6.54□□□□□ -1.36
VRK2-208ENST00000463222 C21orf62-AS1Q17RA5 79 aa6.54□□□□□ -1.36
VRK2-208ENST00000463222 TKFCQ3LXA3 575 aa6.54□□□□□ -1.36
VRK2-208ENST00000463222 FOXD4L6Q3SYB3 417 aaPredicted RBP6.54□□□□□ -1.36
VRK2-208ENST00000463222 C2orf27AQ580R0 203 aa6.54□□□□□ -1.36
VRK2-208ENST00000463222 TMEM201Q5SNT2 666 aa6.54□□□□□ -1.36
VRK2-208ENST00000463222 INTS3Q68E01 1043 aaKnown RBP6.54□□□□□ -1.36
VRK2-208ENST00000463222 KIAA1211LQ6NV74 962 aa6.54□□□□□ -1.36
VRK2-208ENST00000463222 FOXD4L3Q6VB84 417 aaPredicted RBP6.54□□□□□ -1.36
VRK2-208ENST00000463222 TAB3Q8N5C8 712 aaPredicted RBP6.54□□□□□ -1.36
VRK2-208ENST00000463222 UBASH3BQ8TF42 649 aa6.54□□□□□ -1.36
VRK2-208ENST00000463222 ACSF2Q96CM8 615 aaPredicted RBP6.54□□□□□ -1.36
VRK2-208ENST00000463222 SPC25Q9HBM1 224 aa6.54□□□□□ -1.36
VRK2-208ENST00000463222 COL4A3BPQ9Y5P4 624 aa6.54□□□□□ -1.36
VRK2-208ENST00000463222 TACC3Q9Y6A5 838 aa6.54□□□□□ -1.36
VRK2-208ENST00000463222 TNFRSF10CO14798 259 aa6.53□□□□□ -1.36
VRK2-208ENST00000463222 DEAF1O75398 565 aaPredicted RBP6.53□□□□□ -1.36
VRK2-208ENST00000463222 FAM153BP0C7A2 387 aa6.53□□□□□ -1.36
VRK2-208ENST00000463222 AKAP4Q5JQC9 854 aa6.53□□□□□ -1.36
VRK2-208ENST00000463222 CDCP2Q5VXM1 449 aa6.53□□□□□ -1.36
VRK2-208ENST00000463222 C16orf86Q6ZW13 317 aa6.53□□□□□ -1.36
VRK2-208ENST00000463222 ST13P5Q8NFI4 369 aaPredicted RBP6.53□□□□□ -1.36
VRK2-208ENST00000463222 WNT10AQ9GZT5 417 aa6.53□□□□□ -1.36
VRK2-208ENST00000463222 FAM86C1Q9NVL1 165 aa6.53□□□□□ -1.36
VRK2-208ENST00000463222 PPP1R9AQ9ULJ8 1098 aa6.53□□□□□ -1.36
VRK2-208ENST00000463222 PCDHGC5Q9Y5F6 944 aa6.53□□□□□ -1.36
VRK2-208ENST00000463222 SLC12A7Q9Y666 1083 aa6.53□□□□□ -1.36
VRK2-208ENST00000463222 PTCH2Q9Y6C5 1203 aa6.53□□□□□ -1.36
VRK2-208ENST00000463222 ASMTLO95671 621 aa6.52□□□□□ -1.37
VRK2-208ENST00000463222 RAG1P15918 1043 aa6.52□□□□□ -1.37
VRK2-208ENST00000463222 ANAPC15P60006 121 aa6.52□□□□□ -1.37
VRK2-208ENST00000463222 HNRNPUQ00839 825 aaKnown RBP eCLIP6.52□□□□□ -1.37
VRK2-208ENST00000463222 RING1Q06587 406 aa6.52□□□□□ -1.37
VRK2-208ENST00000463222 COL9A3Q14050 684 aaPredicted RBP6.52□□□□□ -1.37
VRK2-208ENST00000463222 NCAPHQ15003 741 aa6.52□□□□□ -1.37
VRK2-208ENST00000463222 GNPTABQ3T906 1256 aa6.52□□□□□ -1.37
VRK2-208ENST00000463222 EXOSC6Q5RKV6 272 aaKnown RBP6.52□□□□□ -1.37
VRK2-208ENST00000463222 EEPD1Q7L9B9 569 aa6.52□□□□□ -1.37
VRK2-208ENST00000463222 KIAA0907Q7Z7F0 614 aaPredicted RBP6.52□□□□□ -1.37
VRK2-208ENST00000463222 FAM13CQ8NE31 585 aa6.52□□□□□ -1.37
VRK2-208ENST00000463222 KLHL6Q8WZ60 621 aa6.52□□□□□ -1.37
VRK2-208ENST00000463222 TRIM11Q96F44 468 aa6.52□□□□□ -1.37
VRK2-208ENST00000463222 PHAXQ9H814 394 aaKnown RBP6.52□□□□□ -1.37
VRK2-208ENST00000463222 PCDH12Q9NPG4 1184 aa6.52□□□□□ -1.37
VRK2-208ENST00000463222 TJP2Q9UDY2 1190 aa6.52□□□□□ -1.37
VRK2-208ENST00000463222 ADAM30Q9UKF2 790 aa6.52□□□□□ -1.37
VRK2-208ENST00000463222 NOP58Q9Y2X3 529 aaKnown RBP6.52□□□□□ -1.37
VRK2-208ENST00000463222 DLL1O00548 723 aa6.51□□□□□ -1.37
VRK2-208ENST00000463222 RAB11FIP3O75154 756 aa6.51□□□□□ -1.37
VRK2-208ENST00000463222 NID1P14543 1247 aa6.51□□□□□ -1.37
VRK2-208ENST00000463222 SLC7A5Q01650 507 aa6.51□□□□□ -1.37
VRK2-208ENST00000463222 ID3Q02535 119 aa6.51□□□□□ -1.37
VRK2-208ENST00000463222 TRAPPC3LQ5T215 181 aa6.51□□□□□ -1.37
VRK2-208ENST00000463222 ILDR2Q71H61 639 aa6.51□□□□□ -1.37
VRK2-208ENST00000463222 JMYQ8N9B5 988 aa6.51□□□□□ -1.37
VRK2-208ENST00000463222 ZCRB1Q8TBF4 217 aaKnown RBP6.51□□□□□ -1.37
VRK2-208ENST00000463222 KIF2CQ99661 725 aa6.51□□□□□ -1.37
VRK2-208ENST00000463222 SPATA9Q9BWV2 254 aa6.51□□□□□ -1.37
VRK2-208ENST00000463222 KRTAP9-2Q9BYQ4 174 aa6.51□□□□□ -1.37
VRK2-208ENST00000463222 SEMA6BQ9H3T3 888 aa6.51□□□□□ -1.37
VRK2-208ENST00000463222 SPDYE3A6NKU9 549 aa6.5□□□□□ -1.37
VRK2-208ENST00000463222 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.5□□□□□ -1.37
VRK2-208ENST00000463222 TMPRSS2O15393 492 aa6.5□□□□□ -1.37
VRK2-208ENST00000463222 SUSD5O60279 629 aa6.5□□□□□ -1.37
VRK2-208ENST00000463222 TP53P04637 393 aaPredicted RBP6.5□□□□□ -1.37
VRK2-208ENST00000463222 GATA4P43694 442 aa6.5□□□□□ -1.37
VRK2-208ENST00000463222 ERVK-24P63145 666 aa6.5□□□□□ -1.37
VRK2-208ENST00000463222 DOC2BQ14184 412 aa6.5□□□□□ -1.37
VRK2-208ENST00000463222 DUOXA2Q1HG44 320 aa6.5□□□□□ -1.37
VRK2-208ENST00000463222 HP1BP3Q5SSJ5 553 aaPredicted RBP6.5□□□□□ -1.37
VRK2-208ENST00000463222 ZBTB37Q5TC79 503 aa6.5□□□□□ -1.37
VRK2-208ENST00000463222 MAP4K3Q8IVH8 894 aa6.5□□□□□ -1.37
VRK2-208ENST00000463222 MCATQ8IVS2 390 aaKnown RBP6.5□□□□□ -1.37
VRK2-208ENST00000463222 PHACTR4Q8IZ21 702 aa6.5□□□□□ -1.37
VRK2-208ENST00000463222 TMEM87BQ96K49 555 aa6.5□□□□□ -1.37
VRK2-208ENST00000463222 DPH2Q9BQC3 489 aaPredicted RBP6.5□□□□□ -1.37
VRK2-208ENST00000463222 PLVAPQ9BX97 442 aa6.5□□□□□ -1.37
VRK2-208ENST00000463222 FBRSQ9HAH7 460 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms