RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 METTL16Q86W50 562 aaKnown RBP14.22□□□□□ -0.13
HDAC4-208ENST00000463007 CERS3Q8IU89 383 aa14.22□□□□□ -0.13
HDAC4-208ENST00000463007 PARD6BQ9BYG5 372 aa14.22□□□□□ -0.13
HDAC4-208ENST00000463007 TAF1P21675 1872 aa14.22□□□□□ -0.13
HDAC4-208ENST00000463007 NID2Q14112 1375 aa14.22□□□□□ -0.13
HDAC4-208ENST00000463007 LOC102724428A0A0B4J2F2 783 aa14.22□□□□□ -0.13
HDAC4-208ENST00000463007 SOWAHDA6NJG2 315 aa14.22□□□□□ -0.13
HDAC4-208ENST00000463007 BTBD18B2RXH4 712 aa14.22□□□□□ -0.13
HDAC4-208ENST00000463007 PES1O00541 588 aaKnown RBP14.22□□□□□ -0.13
HDAC4-208ENST00000463007 TADA3O75528 432 aa14.22□□□□□ -0.13
HDAC4-208ENST00000463007 YEATS4O95619 227 aa14.22□□□□□ -0.13
HDAC4-208ENST00000463007 PRR29P0C7W0 189 aa14.22□□□□□ -0.13
HDAC4-208ENST00000463007 CAPN2P17655 700 aa14.22□□□□□ -0.13
HDAC4-208ENST00000463007 SIK1P57059 783 aa14.22□□□□□ -0.13
HDAC4-208ENST00000463007 ALX1Q15699 326 aa14.22□□□□□ -0.13
HDAC4-208ENST00000463007 SLC9C2Q5TAH2 1124 aa14.22□□□□□ -0.13
HDAC4-208ENST00000463007 NUP133Q8WUM0 1156 aa14.22□□□□□ -0.13
HDAC4-208ENST00000463007 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.22□□□□□ -0.135e-6■■■■■ 34.6
HDAC4-208ENST00000463007 WWC3Q9ULE0 1092 aa14.22□□□□□ -0.13
HDAC4-208ENST00000463007 CYP2C19P33261 490 aa14.22□□□□□ -0.13
HDAC4-208ENST00000463007 FMR1Q06787 632 aaKnown RBP eCLIP14.22□□□□□ -0.13
HDAC4-208ENST00000463007 USP49Q70CQ1 688 aa14.22□□□□□ -0.13
HDAC4-208ENST00000463007 CYB5R4Q7L1T6 521 aa14.22□□□□□ -0.13
HDAC4-208ENST00000463007 GDAP1L1Q96MZ0 367 aa14.22□□□□□ -0.13
HDAC4-208ENST00000463007 PLEKHA4Q9H4M7 779 aa14.22□□□□□ -0.13
HDAC4-208ENST00000463007 ARFGAP3Q9NP61 516 aa14.22□□□□□ -0.13
HDAC4-208ENST00000463007 TACC3Q9Y6A5 838 aa14.22□□□□□ -0.13
HDAC4-208ENST00000463007 ZNF532Q9HCE3 1301 aa14.21□□□□□ -0.13
HDAC4-208ENST00000463007 UQCRFS1P1P0C7P4 283 aa14.21□□□□□ -0.13
HDAC4-208ENST00000463007 BMP6P22004 513 aa14.21□□□□□ -0.13
HDAC4-208ENST00000463007 SLC39A14Q15043 492 aa14.21□□□□□ -0.13
HDAC4-208ENST00000463007 DDB1Q16531 1140 aa14.21□□□□□ -0.13
HDAC4-208ENST00000463007 STRBPQ96SI9 672 aaKnown RBP14.21□□□□□ -0.13
HDAC4-208ENST00000463007 TRIM66O15016 1216 aa14.21□□□□□ -0.14
HDAC4-208ENST00000463007 ZSCAN12O43309 604 aa14.21□□□□□ -0.14
HDAC4-208ENST00000463007 IARSP41252 1262 aaKnown RBP14.21□□□□□ -0.14
HDAC4-208ENST00000463007 RASGRF1Q13972 1273 aa14.21□□□□□ -0.14
HDAC4-208ENST00000463007 EPB41L4AQ9HCS5 686 aaPredicted RBP14.21□□□□□ -0.14
HDAC4-208ENST00000463007 INTS13Q9NVM9 706 aa14.21□□□□□ -0.14
HDAC4-208ENST00000463007 COL1A1P02452 1464 aaPredicted RBP14.2□□□□□ -0.14
HDAC4-208ENST00000463007 CBFA2T2O43439 604 aa14.2□□□□□ -0.14
HDAC4-208ENST00000463007 CTDSPL2Q05D32 466 aa14.2□□□□□ -0.14
HDAC4-208ENST00000463007 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.2□□□□□ -0.14
HDAC4-208ENST00000463007 SERTAD1Q9UHV2 236 aa14.2□□□□□ -0.14
HDAC4-208ENST00000463007 THSD7AQ9UPZ6 1657 aa14.2□□□□□ -0.14
HDAC4-208ENST00000463007 GUCY1A2P33402 732 aa14.2□□□□□ -0.14
HDAC4-208ENST00000463007 NR5A1Q13285 461 aa14.2□□□□□ -0.14
HDAC4-208ENST00000463007 PARP10Q53GL7 1025 aa14.2□□□□□ -0.14
HDAC4-208ENST00000463007 BRAPQ7Z569 592 aa14.2□□□□□ -0.14
HDAC4-208ENST00000463007 VSTM4Q8IW00 320 aa14.2□□□□□ -0.14
HDAC4-208ENST00000463007 SEC31BQ9NQW1 1179 aa14.2□□□□□ -0.14
HDAC4-208ENST00000463007 VPS18Q9P253 973 aa14.2□□□□□ -0.14
HDAC4-208ENST00000463007 GOLGA8AA7E2F4 631 aa14.2□□□□□ -0.14
HDAC4-208ENST00000463007 TEX33O43247 280 aa14.2□□□□□ -0.14
HDAC4-208ENST00000463007 TBC1D8O95759 1140 aa14.2□□□□□ -0.14
HDAC4-208ENST00000463007 RAD51AP2Q09MP3 1159 aa14.2□□□□□ -0.14
HDAC4-208ENST00000463007 CC2D1AQ6P1N0 951 aaPredicted RBP14.2□□□□□ -0.14
HDAC4-208ENST00000463007 MRPL44Q9H9J2 332 aaKnown RBP14.2□□□□□ -0.14
HDAC4-208ENST00000463007 DLEC1Q9Y238 1755 aa14.19□□□□□ -0.14
HDAC4-208ENST00000463007 SH2B2O14492 632 aaPredicted RBP14.19□□□□□ -0.14
HDAC4-208ENST00000463007 SPATA5Q8NB90 893 aa14.19□□□□□ -0.14
HDAC4-208ENST00000463007 EEF2KMTQ96G04 330 aa14.19□□□□□ -0.14
HDAC4-208ENST00000463007 NHSQ6T4R5 1651 aa14.19□□□□□ -0.14
HDAC4-208ENST00000463007 ZNF804BA4D1E1 1349 aa14.19□□□□□ -0.14
HDAC4-208ENST00000463007 ATP6V1AP38606 617 aa14.19□□□□□ -0.14
HDAC4-208ENST00000463007 CCT6AP40227 531 aaKnown RBP14.19□□□□□ -0.14
HDAC4-208ENST00000463007 TMEM67Q5HYA8 995 aa14.19□□□□□ -0.14
HDAC4-208ENST00000463007 GPIHBP1Q8IV16 184 aa14.19□□□□□ -0.14
HDAC4-208ENST00000463007 MAPK8IP1Q9UQF2 711 aa14.19□□□□□ -0.14
HDAC4-208ENST00000463007 KIAA1551Q9HCM1 1747 aa14.18□□□□□ -0.14
HDAC4-208ENST00000463007 EFCAB8A8MWE9 144 aa14.18□□□□□ -0.14
HDAC4-208ENST00000463007 N4BP1O75113 896 aaKnown RBP14.18□□□□□ -0.14
HDAC4-208ENST00000463007 KIF4BQ2VIQ3 1234 aa14.18□□□□□ -0.14
HDAC4-208ENST00000463007 ZNF569Q5MCW4 686 aa14.18□□□□□ -0.14
HDAC4-208ENST00000463007 CPLX2Q6PUV4 134 aaKnown RBP14.18□□□□□ -0.14
HDAC4-208ENST00000463007 JMYQ8N9B5 988 aa14.18□□□□□ -0.14
HDAC4-208ENST00000463007 LCMT1Q9UIC8 334 aa14.18□□□□□ -0.14
HDAC4-208ENST00000463007 BTAF1O14981 1849 aa14.18□□□□□ -0.14
HDAC4-208ENST00000463007 IFIT3O14879 490 aaKnown RBP14.18□□□□□ -0.14
HDAC4-208ENST00000463007 ZBTB43O43298 467 aa14.18□□□□□ -0.14
HDAC4-208ENST00000463007 ABL1P00519 1130 aa14.18□□□□□ -0.14
HDAC4-208ENST00000463007 CCDC102AQ96A19 550 aa14.18□□□□□ -0.14
HDAC4-208ENST00000463007 ANGEL1Q9UNK9 670 aaKnown RBP14.18□□□□□ -0.14
HDAC4-208ENST00000463007 IQSEC3Q9UPP2 1182 aaPredicted RBP14.18□□□□□ -0.14
HDAC4-208ENST00000463007 TAF1LQ8IZX4 1826 aa14.18□□□□□ -0.14
HDAC4-208ENST00000463007 LY75O60449 1722 aa14.18□□□□□ -0.14
HDAC4-208ENST00000463007 RGL2O15211 777 aa14.18□□□□□ -0.14
HDAC4-208ENST00000463007 ARHGAP6O43182 974 aa14.18□□□□□ -0.14
HDAC4-208ENST00000463007 ZRANB2O95218 330 aaKnown RBP eCLIP14.18□□□□□ -0.14
HDAC4-208ENST00000463007 IGDCC4Q8TDY8 1250 aa14.18□□□□□ -0.14
HDAC4-208ENST00000463007 PDE11AQ9HCR9 933 aa14.18□□□□□ -0.14
HDAC4-208ENST00000463007 CCP110O43303 1012 aa14.17□□□□□ -0.14
HDAC4-208ENST00000463007 ZSCAN26Q16670 478 aa14.17□□□□□ -0.14
HDAC4-208ENST00000463007 SGMS1Q86VZ5 419 aa14.17□□□□□ -0.14
HDAC4-208ENST00000463007 RABEP2Q9H5N1 569 aa14.17□□□□□ -0.14
HDAC4-208ENST00000463007 PNPLA7Q6ZV29 1317 aa14.17□□□□□ -0.14
HDAC4-208ENST00000463007 PHLPP2Q6ZVD8 1323 aa14.17□□□□□ -0.14
HDAC4-208ENST00000463007 APOA5Q6Q788 366 aa14.17□□□□□ -0.14
HDAC4-208ENST00000463007 ACSBG1Q96GR2 724 aa14.17□□□□□ -0.14
HDAC4-208ENST00000463007 CDC5LQ99459 802 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms