RNA–Protein interactions for RNA: ENST00000462996.1

PTPN18-208, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-208ENST00000462996 SHROOM1Q2M3G4 852 aaPredicted RBP24.93■■□□□ 1.58
PTPN18-208ENST00000462996 GPR142Q7Z601 462 aa24.93■■□□□ 1.58
PTPN18-208ENST00000462996 FAM9BQ8IZU0 186 aa24.93■■□□□ 1.58
PTPN18-208ENST00000462996 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.93■■□□□ 1.58
PTPN18-208ENST00000462996 RGS2P41220 211 aa24.92■■□□□ 1.58
PTPN18-208ENST00000462996 ERVK-9P63128 1117 aa24.92■■□□□ 1.58
PTPN18-208ENST00000462996 ERVK-24P63145 666 aa24.92■■□□□ 1.58
PTPN18-208ENST00000462996 GSTO1P78417 241 aa24.92■■□□□ 1.58
PTPN18-208ENST00000462996 MVPQ14764 893 aaKnown RBP24.92■■□□□ 1.58
PTPN18-208ENST00000462996 TEX11Q8IYF3 940 aa24.92■■□□□ 1.58
PTPN18-208ENST00000462996 CDH23Q9H251 3354 aa24.91■■□□□ 1.58
PTPN18-208ENST00000462996 TFCP2Q12800 502 aa24.91■■□□□ 1.58
PTPN18-208ENST00000462996 SH3RF3Q8TEJ3 882 aaPredicted RBP24.91■■□□□ 1.58
PTPN18-208ENST00000462996 SENP6Q9GZR1 1112 aaPredicted RBP24.91■■□□□ 1.58
PTPN18-208ENST00000462996 PI4KBQ9UBF8 816 aa24.91■■□□□ 1.58
PTPN18-208ENST00000462996 MAST2Q6P0Q8 1798 aa24.9■■□□□ 1.58
PTPN18-208ENST00000462996 C19orf81C9J6K1 198 aa24.9■■□□□ 1.58
PTPN18-208ENST00000462996 ASNSP08243 561 aa24.9■■□□□ 1.58
PTPN18-208ENST00000462996 PLEKHH3Q7Z736 793 aa24.9■■□□□ 1.58
PTPN18-208ENST00000462996 SPATA5Q8NB90 893 aa24.9■■□□□ 1.58
PTPN18-208ENST00000462996 APBA2Q99767 749 aa24.9■■□□□ 1.58
PTPN18-208ENST00000462996 LBHD1Q9BQE6 289 aaPredicted RBP24.9■■□□□ 1.58
PTPN18-208ENST00000462996 DNAJC18Q9H819 358 aa24.9■■□□□ 1.58
PTPN18-208ENST00000462996 RAI14Q9P0K7 980 aa24.9■■□□□ 1.58
PTPN18-208ENST00000462996 PAGR1Q9BTK6 254 aa24.89■■□□□ 1.58
PTPN18-208ENST00000462996 AKAP2Q9Y2D5 859 aa24.89■■□□□ 1.58
PTPN18-208ENST00000462996 USP17L10C9JJH3 530 aa24.88■■□□□ 1.57
PTPN18-208ENST00000462996 ALDH1L2Q3SY69 923 aa24.88■■□□□ 1.57
PTPN18-208ENST00000462996 CCAR1Q8IX12 1150 aaKnown RBP24.88■■□□□ 1.57
PTPN18-208ENST00000462996 EMILIN3Q9NT22 766 aa24.88■■□□□ 1.57
PTPN18-208ENST00000462996 FLRT1Q9NZU1 646 aa24.88■■□□□ 1.57
PTPN18-208ENST00000462996 MAP2K5Q13163 448 aa24.87■■□□□ 1.57
PTPN18-208ENST00000462996 ZNF697Q5TEC3 545 aa24.87■■□□□ 1.57
PTPN18-208ENST00000462996 METTL16Q86W50 562 aaKnown RBP24.87■■□□□ 1.57
PTPN18-208ENST00000462996 NEUROD6Q96NK8 337 aa24.87■■□□□ 1.57
PTPN18-208ENST00000462996 CDX2Q99626 313 aaPredicted RBP24.87■■□□□ 1.57
PTPN18-208ENST00000462996 DHX36Q9H2U1 1008 aaKnown RBP24.87■■□□□ 1.57
PTPN18-208ENST00000462996 GDF11O95390 407 aa24.86■■□□□ 1.57
PTPN18-208ENST00000462996 ATN1P54259 1190 aaPredicted RBP24.86■■□□□ 1.57
PTPN18-208ENST00000462996 MEIS3Q99687 375 aa24.86■■□□□ 1.57
PTPN18-208ENST00000462996 SMC4Q9NTJ3 1288 aa24.86■■□□□ 1.57
PTPN18-208ENST00000462996 LTBP2Q14767 1821 aa24.85■■□□□ 1.57
PTPN18-208ENST00000462996 ANP32CO43423 234 aa24.85■■□□□ 1.57
PTPN18-208ENST00000462996 CNMDO75829 334 aa24.85■■□□□ 1.57
PTPN18-208ENST00000462996 GTF3C2Q8WUA4 911 aaPredicted RBP24.85■■□□□ 1.57
PTPN18-208ENST00000462996 EDC3Q96F86 508 aaKnown RBP24.85■■□□□ 1.57
PTPN18-208ENST00000462996 NDUFB9Q9Y6M9 179 aa24.85■■□□□ 1.57
PTPN18-208ENST00000462996 CDK5RAP2Q96SN8 1893 aa24.85■■□□□ 1.57
PTPN18-208ENST00000462996 E9PSI1 815 aa24.84■■□□□ 1.57
PTPN18-208ENST00000462996 ARID4AP29374 1257 aaPredicted RBP24.84■■□□□ 1.57
PTPN18-208ENST00000462996 FOXP4Q8IVH2 680 aaPredicted RBP24.84■■□□□ 1.57
PTPN18-208ENST00000462996 TGFBRAP1Q8WUH2 860 aa24.84■■□□□ 1.57
PTPN18-208ENST00000462996 SEMA6BQ9H3T3 888 aa24.84■■□□□ 1.57
PTPN18-208ENST00000462996 AATFQ9NY61 560 aaKnown RBP eCLIP24.84■■□□□ 1.57
PTPN18-208ENST00000462996 DDX20Q9UHI6 824 aaKnown RBP24.84■■□□□ 1.57
PTPN18-208ENST00000462996 ZBTB21Q9ULJ3 1066 aa24.84■■□□□ 1.57
PTPN18-208ENST00000462996 HDAC5Q9UQL6 1122 aa24.84■■□□□ 1.57
PTPN18-208ENST00000462996 MCAMP43121 646 aa24.83■■□□□ 1.57
PTPN18-208ENST00000462996 SHHQ15465 462 aa24.83■■□□□ 1.57
PTPN18-208ENST00000462996 MFSD14CQ5VZR4 134 aa24.83■■□□□ 1.57
PTPN18-208ENST00000462996 MAPKAPK5Q8IW41 473 aa24.83■■□□□ 1.57
PTPN18-208ENST00000462996 MAFAQ8NHW3 353 aaPredicted RBP24.83■■□□□ 1.57
PTPN18-208ENST00000462996 GINM1Q9NU53 330 aa24.83■■□□□ 1.57
PTPN18-208ENST00000462996 LRP2BPQ9P2M1 347 aa24.83■■□□□ 1.57
PTPN18-208ENST00000462996 SRGAP3O43295 1099 aa24.82■■□□□ 1.56
PTPN18-208ENST00000462996 RTP1P59025 263 aa24.82■■□□□ 1.56
PTPN18-208ENST00000462996 SLFN5Q08AF3 891 aa24.82■■□□□ 1.56
PTPN18-208ENST00000462996 GORABQ5T7V8 394 aa24.82■■□□□ 1.56
PTPN18-208ENST00000462996 USP17L2Q6R6M4 530 aa24.82■■□□□ 1.56
PTPN18-208ENST00000462996 LPAR1Q92633 364 aa24.82■■□□□ 1.56
PTPN18-208ENST00000462996 CWC22Q9HCG8 908 aaKnown RBP24.82■■□□□ 1.56
PTPN18-208ENST00000462996 PALD1Q9ULE6 856 aa24.82■■□□□ 1.56
PTPN18-208ENST00000462996 NOB1Q9ULX3 412 aaKnown RBP24.82■■□□□ 1.56
PTPN18-208ENST00000462996 RABGAP1Q9Y3P9 1069 aa24.82■■□□□ 1.56
PTPN18-208ENST00000462996 MUC3AQ02505 3323 aa24.81■■□□□ 1.56
PTPN18-208ENST00000462996 C9orf50Q5SZB4 431 aa24.81■■□□□ 1.56
PTPN18-208ENST00000462996 CRACR2BQ8N4Y2 399 aaPredicted RBP24.81■■□□□ 1.56
PTPN18-208ENST00000462996 NOL10Q9BSC4 688 aaKnown RBP24.81■■□□□ 1.56
PTPN18-208ENST00000462996 PRDM6Q9NQX0 595 aa24.81■■□□□ 1.56
PTPN18-208ENST00000462996 PRKAG2Q9UGJ0 569 aa24.81■■□□□ 1.56
PTPN18-208ENST00000462996 FOCADQ5VW36 1801 aa24.81■■□□□ 1.56
PTPN18-208ENST00000462996 FLT1P17948 1338 aa24.81■■□□□ 1.56
PTPN18-208ENST00000462996 RLFQ13129 1914 aa24.8■■□□□ 1.56
PTPN18-208ENST00000462996 DNM1LO00429 736 aa24.8■■□□□ 1.56
PTPN18-208ENST00000462996 PTPREP23469 700 aa24.8■■□□□ 1.56
PTPN18-208ENST00000462996 CNGA1P29973 690 aa24.8■■□□□ 1.56
PTPN18-208ENST00000462996 PPP4CP60510 307 aa24.8■■□□□ 1.56
PTPN18-208ENST00000462996 ADGRA1Q86SQ6 560 aa24.8■■□□□ 1.56
PTPN18-208ENST00000462996 TRPV1Q8NER1 839 aa24.8■■□□□ 1.56
PTPN18-208ENST00000462996 SLC15A5A6NIM6 579 aa24.79■■□□□ 1.56
PTPN18-208ENST00000462996 MSCO60682 206 aa24.79■■□□□ 1.56
PTPN18-208ENST00000462996 BAG3O95817 575 aa24.79■■□□□ 1.56
PTPN18-208ENST00000462996 NAA16Q6N069 864 aaPredicted RBP24.79■■□□□ 1.56
PTPN18-208ENST00000462996 NPLOC4Q8TAT6 608 aa24.79■■□□□ 1.56
PTPN18-208ENST00000462996 TRIM34Q9BYJ4 488 aa24.79■■□□□ 1.56
PTPN18-208ENST00000462996 ATP11BQ9Y2G3 1177 aa24.79■■□□□ 1.56
PTPN18-208ENST00000462996 GLRX3O76003 335 aaKnown RBP24.78■■□□□ 1.56
PTPN18-208ENST00000462996 IGHA2P01877 340 aa24.78■■□□□ 1.56
PTPN18-208ENST00000462996 HOXC6P09630 235 aa24.78■■□□□ 1.56
PTPN18-208ENST00000462996 PLCG2P16885 1265 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms