RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 C1QL4Q86Z23 238 aa4.51□□□□□ -1.69
CD46-210ENST00000462968 STK11IPQ8N1F8 1099 aa4.51□□□□□ -1.69
CD46-210ENST00000462968 HHIPQ96QV1 700 aa4.51□□□□□ -1.69
CD46-210ENST00000462968 PDGFDQ9GZP0 370 aaPredicted RBP4.51□□□□□ -1.69
CD46-210ENST00000462968 MTFR1LQ9H019 292 aa4.51□□□□□ -1.69
CD46-210ENST00000462968 DZANK1Q9NVP4 752 aa4.51□□□□□ -1.69
CD46-210ENST00000462968 BTG4Q9NY30 223 aa4.51□□□□□ -1.69
CD46-210ENST00000462968 RGPD1P0DJD0 1748 aa4.51□□□□□ -1.69
CD46-210ENST00000462968 MAP3K5Q99683 1374 aa4.51□□□□□ -1.69
CD46-210ENST00000462968 PDE2AO00408 941 aaPredicted RBP4.5□□□□□ -1.69
CD46-210ENST00000462968 PLSCR1O15162 318 aa4.5□□□□□ -1.69
CD46-210ENST00000462968 GRIN3BO60391 1043 aa4.5□□□□□ -1.69
CD46-210ENST00000462968 FUT4P22083 530 aa4.5□□□□□ -1.69
CD46-210ENST00000462968 CYP27A1Q02318 531 aa4.5□□□□□ -1.69
CD46-210ENST00000462968 SOX4Q06945 474 aaPredicted RBP4.5□□□□□ -1.69
CD46-210ENST00000462968 PDE3BQ13370 1112 aa4.5□□□□□ -1.69
CD46-210ENST00000462968 EXOSC6Q5RKV6 272 aaKnown RBP4.5□□□□□ -1.69
CD46-210ENST00000462968 C16orf46Q6P387 395 aa4.5□□□□□ -1.69
CD46-210ENST00000462968 KRT28Q7Z3Y7 464 aa4.5□□□□□ -1.69
CD46-210ENST00000462968 VN1R5Q7Z5H4 357 aa4.5□□□□□ -1.69
CD46-210ENST00000462968 SLC38A3Q99624 504 aa4.5□□□□□ -1.69
CD46-210ENST00000462968 YIPF2Q9BWQ6 316 aa4.5□□□□□ -1.69
CD46-210ENST00000462968 USP26Q9BXU7 913 aa4.5□□□□□ -1.69
CD46-210ENST00000462968 MBNL3Q9NUK0 354 aaKnown RBP4.5□□□□□ -1.69
CD46-210ENST00000462968 AATKQ6ZMQ8 1374 aa4.5□□□□□ -1.69
CD46-210ENST00000462968 NRKQ7Z2Y5 1582 aa4.49□□□□□ -1.69
CD46-210ENST00000462968 ATP10DQ9P241 1426 aa4.49□□□□□ -1.69
CD46-210ENST00000462968 RNASE1P07998 156 aaKnown RBP4.49□□□□□ -1.69
CD46-210ENST00000462968 CFPP27918 469 aa4.49□□□□□ -1.69
CD46-210ENST00000462968 ZAP70P43403 619 aa4.49□□□□□ -1.69
CD46-210ENST00000462968 PDE12Q6L8Q7 609 aaKnown RBP4.49□□□□□ -1.69
CD46-210ENST00000462968 LCNL1Q6ZST4 164 aa4.49□□□□□ -1.69
CD46-210ENST00000462968 JMYQ8N9B5 988 aa4.49□□□□□ -1.69
CD46-210ENST00000462968 GLMNQ92990 594 aa4.49□□□□□ -1.69
CD46-210ENST00000462968 MISP3Q96FF7 219 aa4.49□□□□□ -1.69
CD46-210ENST00000462968 FAM84AQ96KN4 292 aa4.49□□□□□ -1.69
CD46-210ENST00000462968 PPP1R12CQ9BZL4 782 aa4.49□□□□□ -1.69
CD46-210ENST00000462968 SOX17Q9H6I2 414 aaPredicted RBP4.49□□□□□ -1.69
CD46-210ENST00000462968 VRTNQ9H8Y1 702 aa4.49□□□□□ -1.69
CD46-210ENST00000462968 ELP3Q9H9T3 547 aa4.49□□□□□ -1.69
CD46-210ENST00000462968 RC3H2Q9HBD1 1191 aaKnown RBP4.49□□□□□ -1.69
CD46-210ENST00000462968 TMEM63CQ9P1W3 806 aa4.49□□□□□ -1.69
CD46-210ENST00000462968 CNTN3Q9P232 1028 aa4.49□□□□□ -1.69
CD46-210ENST00000462968 KANSL3Q9P2N6 904 aa4.49□□□□□ -1.69
CD46-210ENST00000462968 ADAMTS6Q9UKP5 1117 aa4.49□□□□□ -1.69
CD46-210ENST00000462968 WWC3Q9ULE0 1092 aa4.49□□□□□ -1.69
CD46-210ENST00000462968 DLC1Q96QB1 1528 aa4.49□□□□□ -1.69
CD46-210ENST00000462968 TMEM131LA2VDJ0 1609 aa4.49□□□□□ -1.69
CD46-210ENST00000462968 XRN1Q8IZH2 1706 aaKnown RBP4.49□□□□□ -1.69
CD46-210ENST00000462968 CFAP65Q6ZU64 1925 aaKnown RBP4.48□□□□□ -1.69
CD46-210ENST00000462968 CCDC144AA2RUR9 1427 aa4.48□□□□□ -1.69
CD46-210ENST00000462968 ABCC5O15440 1437 aa4.48□□□□□ -1.69
CD46-210ENST00000462968 MYOM3Q5VTT5 1437 aa4.48□□□□□ -1.69
CD46-210ENST00000462968 USP32Q8NFA0 1604 aa4.48□□□□□ -1.69
CD46-210ENST00000462968 B8ZZF3 427 aa4.48□□□□□ -1.69
CD46-210ENST00000462968 TRPA1O75762 1119 aa4.48□□□□□ -1.69
CD46-210ENST00000462968 NFICP08651 508 aa4.48□□□□□ -1.69
CD46-210ENST00000462968 ADH5P11766 374 aa4.48□□□□□ -1.69
CD46-210ENST00000462968 IKBKEQ14164 716 aa4.48□□□□□ -1.69
CD46-210ENST00000462968 SEZ6L2Q6UXD5 910 aa4.48□□□□□ -1.69
CD46-210ENST00000462968 TMEM102Q8N9M5 508 aaPredicted RBP4.48□□□□□ -1.69
CD46-210ENST00000462968 GPR152Q8TDT2 470 aa4.48□□□□□ -1.69
CD46-210ENST00000462968 SEMA6CQ9H3T2 930 aa4.48□□□□□ -1.69
CD46-210ENST00000462968 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.48□□□□□ -1.692e-10■■■□□ 19.2
CD46-210ENST00000462968 ACTL7BQ9Y614 415 aa4.48□□□□□ -1.69
CD46-210ENST00000462968 ROBO2Q9HCK4 1378 aa4.48□□□□□ -1.69
CD46-210ENST00000462968 SPATA31A1Q5TZJ5 1347 aa4.47□□□□□ -1.69
CD46-210ENST00000462968 HFM1A2PYH4 1435 aa4.47□□□□□ -1.69
CD46-210ENST00000462968 NEXMIFQ5QGS0 1516 aa4.47□□□□□ -1.69
CD46-210ENST00000462968 CD8BP10966 210 aa4.47□□□□□ -1.69
CD46-210ENST00000462968 BUD31P41223 144 aaPredicted RBP4.47□□□□□ -1.69
CD46-210ENST00000462968 BNIP3Q12983 259 aa4.47□□□□□ -1.69
CD46-210ENST00000462968 MAP7Q14244 749 aa4.47□□□□□ -1.69
CD46-210ENST00000462968 SLC15A2Q16348 729 aa4.47□□□□□ -1.69
CD46-210ENST00000462968 OCLNQ16625 522 aa4.47□□□□□ -1.69
CD46-210ENST00000462968 SIAH1Q8IUQ4 282 aa4.47□□□□□ -1.69
CD46-210ENST00000462968 LRRN4CLQ8ND94 238 aa4.47□□□□□ -1.69
CD46-210ENST00000462968 BSNDQ8WZ55 320 aa4.47□□□□□ -1.69
CD46-210ENST00000462968 NXPE3Q969Y0 559 aa4.47□□□□□ -1.69
CD46-210ENST00000462968 TOX2Q96NM4 488 aa4.47□□□□□ -1.69
CD46-210ENST00000462968 NRSN2Q9GZP1 204 aa4.47□□□□□ -1.69
CD46-210ENST00000462968 C1GALT1Q9NS00 363 aa4.47□□□□□ -1.69
CD46-210ENST00000462968 STK32BQ9NY57 414 aa4.47□□□□□ -1.69
CD46-210ENST00000462968 ARHGEF10O15013 1369 aa4.47□□□□□ -1.69
CD46-210ENST00000462968 TNS3Q68CZ2 1445 aa4.46□□□□□ -1.69
CD46-210ENST00000462968 RRBP1Q9P2E9 1410 aaKnown RBP4.46□□□□□ -1.69
CD46-210ENST00000462968 SHANK3Q9BYB0 1731 aa4.46□□□□□ -1.69
CD46-210ENST00000462968 TNS1Q9HBL0 1735 aaKnown RBP4.46□□□□□ -1.69
CD46-210ENST00000462968 MARF1Q9Y4F3 1742 aaKnown RBP4.46□□□□□ -1.69
CD46-210ENST00000462968 GOLGB1Q14789 3259 aaKnown RBP4.46□□□□□ -1.7
CD46-210ENST00000462968 ZBTB39O15060 712 aa4.46□□□□□ -1.7
CD46-210ENST00000462968 ZNF326Q5BKZ1 582 aaKnown RBP4.46□□□□□ -1.7
CD46-210ENST00000462968 OGFOD3Q6PK18 319 aa4.46□□□□□ -1.7
CD46-210ENST00000462968 TTLL10Q6ZVT0 673 aa4.46□□□□□ -1.7
CD46-210ENST00000462968 FAM200AQ8TCP9 573 aa4.46□□□□□ -1.7
CD46-210ENST00000462968 ZNF526Q8TF50 670 aaPredicted RBP4.46□□□□□ -1.7
CD46-210ENST00000462968 PRIMPOLQ96LW4 560 aa4.46□□□□□ -1.7
CD46-210ENST00000462968 ACSS3Q9H6R3 686 aa4.46□□□□□ -1.7
CD46-210ENST00000462968 RAPGEFL1Q9UHV5 662 aa4.46□□□□□ -1.7
CD46-210ENST00000462968 PTPN23Q9H3S7 1636 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms