RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 GTF2A2P52657 109 aa9.19□□□□□ -0.94
USP4-207ENST00000462673 IMMTQ16891 758 aaKnown RBP9.19□□□□□ -0.94
USP4-207ENST00000462673 CTR9Q6PD62 1173 aa9.19□□□□□ -0.94
USP4-207ENST00000462673 FASTKD5Q7L8L6 764 aaKnown RBP9.19□□□□□ -0.94
USP4-207ENST00000462673 SCYL3Q8IZE3 742 aa9.19□□□□□ -0.94
USP4-207ENST00000462673 FAM227BQ96M60 508 aa9.19□□□□□ -0.94
USP4-207ENST00000462673 MKRN1Q9UHC7 482 aaKnown RBP9.19□□□□□ -0.94
USP4-207ENST00000462673 WDR33Q9C0J8 1336 aaKnown RBP9.19□□□□□ -0.94
USP4-207ENST00000462673 MAST2Q6P0Q8 1798 aa9.19□□□□□ -0.94
USP4-207ENST00000462673 USP17L5A8MUK1 530 aa9.18□□□□□ -0.94
USP4-207ENST00000462673 ESPNB1AK53 854 aa9.18□□□□□ -0.94
USP4-207ENST00000462673 C19orf81C9J6K1 198 aa9.18□□□□□ -0.94
USP4-207ENST00000462673 M0R2C6 588 aa9.18□□□□□ -0.94
USP4-207ENST00000462673 CA12O43570 354 aa9.18□□□□□ -0.94
USP4-207ENST00000462673 PRKAB2O43741 272 aa9.18□□□□□ -0.94
USP4-207ENST00000462673 REC8O95072 547 aa9.18□□□□□ -0.94
USP4-207ENST00000462673 FGAP02671 866 aa9.18□□□□□ -0.94
USP4-207ENST00000462673 CETPP11597 493 aa9.18□□□□□ -0.94
USP4-207ENST00000462673 PLCD1P51178 756 aa9.18□□□□□ -0.94
USP4-207ENST00000462673 FMR1Q06787 632 aaKnown RBP eCLIP9.18□□□□□ -0.94
USP4-207ENST00000462673 TRDNQ13061 729 aa9.18□□□□□ -0.94
USP4-207ENST00000462673 GRM1Q13255 1194 aa9.18□□□□□ -0.94
USP4-207ENST00000462673 SNAPC2Q13487 334 aa9.18□□□□□ -0.94
USP4-207ENST00000462673 ABCB5Q2M3G0 1257 aa9.18□□□□□ -0.94
USP4-207ENST00000462673 NOL9Q5SY16 702 aaKnown RBP9.18□□□□□ -0.94
USP4-207ENST00000462673 RNF20Q5VTR2 975 aa9.18□□□□□ -0.94
USP4-207ENST00000462673 TATDN1Q6P1N9 297 aa9.18□□□□□ -0.94
USP4-207ENST00000462673 DLK2Q6UY11 383 aa9.18□□□□□ -0.94
USP4-207ENST00000462673 SH3BP5LQ7L8J4 393 aa9.18□□□□□ -0.94
USP4-207ENST00000462673 DOCK2Q92608 1830 aa9.18□□□□□ -0.94
USP4-207ENST00000462673 ZKSCAN4Q969J2 545 aaPredicted RBP9.18□□□□□ -0.94
USP4-207ENST00000462673 SNX21Q969T3 373 aa9.18□□□□□ -0.94
USP4-207ENST00000462673 CAPNS2Q96L46 248 aa9.18□□□□□ -0.94
USP4-207ENST00000462673 TRPM7Q96QT4 1865 aa9.18□□□□□ -0.94
USP4-207ENST00000462673 SEC62Q99442 399 aaKnown RBP9.18□□□□□ -0.94
USP4-207ENST00000462673 PANK2Q9BZ23 570 aa9.18□□□□□ -0.94
USP4-207ENST00000462673 SH2D4AQ9H788 454 aa9.18□□□□□ -0.94
USP4-207ENST00000462673 U3KPZ7 1027 aaPredicted RBP9.18□□□□□ -0.94
USP4-207ENST00000462673 PAPPA2Q9BXP8 1791 aa9.17□□□□□ -0.94
USP4-207ENST00000462673 ZMYM6O95789 1325 aa9.17□□□□□ -0.94
USP4-207ENST00000462673 A0A0D9SFI3 127 aa9.17□□□□□ -0.94
USP4-207ENST00000462673 SPDYE5A6NIY4 337 aa9.17□□□□□ -0.94
USP4-207ENST00000462673 PHF20L1A8MW92 1017 aa9.17□□□□□ -0.94
USP4-207ENST00000462673 MPHOSPH10O00566 681 aaKnown RBP9.17□□□□□ -0.94
USP4-207ENST00000462673 EPB41L2O43491 1005 aaKnown RBP9.17□□□□□ -0.94
USP4-207ENST00000462673 SLC10A3P09131 477 aa9.17□□□□□ -0.94
USP4-207ENST00000462673 USP14P54578 494 aa9.17□□□□□ -0.94
USP4-207ENST00000462673 CCDC173Q0VFZ6 552 aa9.17□□□□□ -0.94
USP4-207ENST00000462673 PABPC4Q13310 644 aaKnown RBP eCLIP9.17□□□□□ -0.94
USP4-207ENST00000462673 PPIL2Q13356 520 aa9.17□□□□□ -0.94
USP4-207ENST00000462673 VGLL4Q14135 290 aa9.17□□□□□ -0.94
USP4-207ENST00000462673 SLFNL1Q499Z3 407 aa9.17□□□□□ -0.94
USP4-207ENST00000462673 CCDC178Q5BJE1 867 aa9.17□□□□□ -0.94
USP4-207ENST00000462673 SPRYD7Q5W111 196 aa9.17□□□□□ -0.94
USP4-207ENST00000462673 CYP4F22Q6NT55 531 aa9.17□□□□□ -0.94
USP4-207ENST00000462673 MFSD6Q6ZSS7 791 aa9.17□□□□□ -0.94
USP4-207ENST00000462673 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.17□□□□□ -0.94
USP4-207ENST00000462673 TMEM179Q6ZVK1 233 aa9.17□□□□□ -0.94
USP4-207ENST00000462673 C16orf86Q6ZW13 317 aa9.17□□□□□ -0.94
USP4-207ENST00000462673 OPTNQ96CV9 577 aa9.17□□□□□ -0.94
USP4-207ENST00000462673 CNNM2Q9H8M5 875 aa9.17□□□□□ -0.94
USP4-207ENST00000462673 ELP3Q9H9T3 547 aa9.17□□□□□ -0.94
USP4-207ENST00000462673 ANAPC4Q9UJX5 808 aa9.17□□□□□ -0.94
USP4-207ENST00000462673 ZHX2Q9Y6X8 837 aa9.17□□□□□ -0.94
USP4-207ENST00000462673 USP17L10C9JJH3 530 aa9.16□□□□□ -0.94
USP4-207ENST00000462673 GOLGA6L22H0YM25 854 aa9.16□□□□□ -0.94
USP4-207ENST00000462673 SGSM2O43147 1006 aa9.16□□□□□ -0.94
USP4-207ENST00000462673 PTPRAP18433 802 aa9.16□□□□□ -0.94
USP4-207ENST00000462673 TM4SF4P48230 202 aa9.16□□□□□ -0.94
USP4-207ENST00000462673 CDK8P49336 464 aa9.16□□□□□ -0.94
USP4-207ENST00000462673 VEGFBP49765 207 aa9.16□□□□□ -0.94
USP4-207ENST00000462673 GABPAQ06546 454 aa9.16□□□□□ -0.94
USP4-207ENST00000462673 PPARAQ07869 468 aa9.16□□□□□ -0.94
USP4-207ENST00000462673 MOB2Q70IA6 237 aa9.16□□□□□ -0.94
USP4-207ENST00000462673 ZNF280CQ8ND82 737 aa9.16□□□□□ -0.94
USP4-207ENST00000462673 OTUD5Q96G74 571 aa9.16□□□□□ -0.94
USP4-207ENST00000462673 WNK4Q96J92 1243 aa9.16□□□□□ -0.94
USP4-207ENST00000462673 KRT23Q9C075 422 aa9.16□□□□□ -0.94
USP4-207ENST00000462673 KANSL2Q9H9L4 492 aa9.16□□□□□ -0.94
USP4-207ENST00000462673 ARHGEF10LQ9HCE6 1279 aa9.16□□□□□ -0.94
USP4-207ENST00000462673 TMOD4Q9NZQ9 345 aa9.16□□□□□ -0.94
USP4-207ENST00000462673 MYH7P12883 1935 aa9.15□□□□□ -0.94
USP4-207ENST00000462673 CHGBP05060 677 aa9.15□□□□□ -0.94
USP4-207ENST00000462673 TSPY3P0CV98 308 aa9.15□□□□□ -0.94
USP4-207ENST00000462673 TSPY8P0CW00 308 aa9.15□□□□□ -0.94
USP4-207ENST00000462673 ZKSCAN1P17029 563 aaPredicted RBP9.15□□□□□ -0.94
USP4-207ENST00000462673 MCCP23508 829 aa9.15□□□□□ -0.94
USP4-207ENST00000462673 INPP5BP32019 993 aa9.15□□□□□ -0.94
USP4-207ENST00000462673 DDIT3P35638 169 aa9.15□□□□□ -0.94
USP4-207ENST00000462673 RBM25P49756 843 aaKnown RBP9.15□□□□□ -0.94
USP4-207ENST00000462673 KIF23Q02241 960 aaPredicted RBP9.15□□□□□ -0.94
USP4-207ENST00000462673 RAB3GAP1Q15042 981 aa9.15□□□□□ -0.94
USP4-207ENST00000462673 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.15□□□□□ -0.94
USP4-207ENST00000462673 CCDC129Q6ZRS4 1044 aa9.15□□□□□ -0.94
USP4-207ENST00000462673 IQCA1Q86XH1 822 aa9.15□□□□□ -0.94
USP4-207ENST00000462673 DNAJC5GQ8N7S2 189 aa9.15□□□□□ -0.94
USP4-207ENST00000462673 ANP32BQ92688 251 aaKnown RBP9.15□□□□□ -0.94
USP4-207ENST00000462673 ESR2Q92731 530 aa9.15□□□□□ -0.94
USP4-207ENST00000462673 MAP4K1Q92918 833 aa9.15□□□□□ -0.94
USP4-207ENST00000462673 ESYT1Q9BSJ8 1104 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 251.8 ms