RNA–Protein interactions for RNA: ENST00000462376.1

LYST-204, Transcript of lysosomal trafficking regulator, humanhuman

TSL 4

Gene LYST, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYST-204ENST00000462376 SNX11Q9Y5W9 270 aa8.47□□□□□ -1.05
LYST-204ENST00000462376 PGRP06401 933 aa8.46□□□□□ -1.06
LYST-204ENST00000462376 RPS26P62854 115 aaKnown RBP8.46□□□□□ -1.06
LYST-204ENST00000462376 TAGLNQ01995 201 aaKnown RBP8.46□□□□□ -1.06
LYST-204ENST00000462376 SFRP5Q5T4F7 317 aa8.46□□□□□ -1.06
LYST-204ENST00000462376 AGMOQ6ZNB7 445 aa8.46□□□□□ -1.06
LYST-204ENST00000462376 NPAS4Q8IUM7 802 aa8.46□□□□□ -1.06
LYST-204ENST00000462376 MFSD2AQ8NA29 543 aa8.46□□□□□ -1.06
LYST-204ENST00000462376 HSPA12BQ96MM6 686 aa8.46□□□□□ -1.06
LYST-204ENST00000462376 TFE3P19532 575 aaPredicted RBP8.45□□□□□ -1.06
LYST-204ENST00000462376 TAF1CQ15572 869 aaPredicted RBP8.45□□□□□ -1.06
LYST-204ENST00000462376 LETMD1Q6P1Q0 360 aa8.45□□□□□ -1.06
LYST-204ENST00000462376 MAPK8IP1Q9UQF2 711 aa8.45□□□□□ -1.06
LYST-204ENST00000462376 H3BS24 57 aa8.44□□□□□ -1.06
LYST-204ENST00000462376 GFRA2O00451 464 aa8.44□□□□□ -1.06
LYST-204ENST00000462376 DAB2P98082 770 aa8.44□□□□□ -1.06
LYST-204ENST00000462376 ATG4DQ86TL0 474 aaPredicted RBP8.44□□□□□ -1.06
LYST-204ENST00000462376 CDH24Q86UP0 819 aa8.44□□□□□ -1.06
LYST-204ENST00000462376 FAM168AQ92567 244 aa8.44□□□□□ -1.06
LYST-204ENST00000462376 SLC23A3Q6PIS1 610 aa8.43□□□□□ -1.06
LYST-204ENST00000462376 DNAJC14Q6Y2X3 702 aaPredicted RBP8.43□□□□□ -1.06
LYST-204ENST00000462376 MFSD4AQ8N468 514 aa8.43□□□□□ -1.06
LYST-204ENST00000462376 ATP13A1Q9HD20 1204 aa8.43□□□□□ -1.06
LYST-204ENST00000462376 TJP2Q9UDY2 1190 aa8.43□□□□□ -1.06
LYST-204ENST00000462376 CARMIL2Q6F5E8 1435 aa8.43□□□□□ -1.06
LYST-204ENST00000462376 CTSHP09668 335 aa8.42□□□□□ -1.06
LYST-204ENST00000462376 CLCN7P51798 805 aa8.42□□□□□ -1.06
LYST-204ENST00000462376 GZF1Q9H116 711 aaPredicted RBP8.42□□□□□ -1.06
LYST-204ENST00000462376 CARS2Q9HA77 564 aaKnown RBP8.42□□□□□ -1.06
LYST-204ENST00000462376 MRS2Q9HD23 443 aa8.42□□□□□ -1.06
LYST-204ENST00000462376 PITPNM2Q9BZ72 1349 aa8.42□□□□□ -1.06
LYST-204ENST00000462376 CST3P01034 146 aaPredicted RBP8.41□□□□□ -1.06
LYST-204ENST00000462376 TSNAXIP1Q2TAA8 658 aa8.41□□□□□ -1.06
LYST-204ENST00000462376 ZNF648Q5T619 568 aaPredicted RBP8.41□□□□□ -1.06
LYST-204ENST00000462376 VTI1BQ9UEU0 232 aa8.41□□□□□ -1.06
LYST-204ENST00000462376 CORINQ9Y5Q5 1042 aa8.41□□□□□ -1.06
LYST-204ENST00000462376 SORBS3O60504 671 aa8.4□□□□□ -1.06
LYST-204ENST00000462376 PDE4BQ07343 736 aa8.4□□□□□ -1.06
LYST-204ENST00000462376 BNC2Q6ZN30 1099 aaPredicted RBP8.4□□□□□ -1.06
LYST-204ENST00000462376 TMC4Q7Z404 712 aa8.4□□□□□ -1.06
LYST-204ENST00000462376 UBE2FQ969M7 185 aa8.4□□□□□ -1.06
LYST-204ENST00000462376 ZSWIM5Q9P217 1185 aa8.4□□□□□ -1.06
LYST-204ENST00000462376 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.4□□□□□ -1.06
LYST-204ENST00000462376 RLBP1P12271 317 aa8.39□□□□□ -1.07
LYST-204ENST00000462376 CAP2P40123 477 aa8.39□□□□□ -1.07
LYST-204ENST00000462376 RPL6Q02878 288 aaKnown RBP8.39□□□□□ -1.07
LYST-204ENST00000462376 ZNF746Q6NUN9 644 aaPredicted RBP8.39□□□□□ -1.07
LYST-204ENST00000462376 TMEM87BQ96K49 555 aa8.39□□□□□ -1.07
LYST-204ENST00000462376 SEMA3GQ9NS98 782 aa8.39□□□□□ -1.07
LYST-204ENST00000462376 CAPN6Q9Y6Q1 641 aa8.39□□□□□ -1.07
LYST-204ENST00000462376 MINDY4BA8MYZ0 360 aa8.38□□□□□ -1.07
LYST-204ENST00000462376 UPK3BL1B0FP48 263 aa8.38□□□□□ -1.07
LYST-204ENST00000462376 UPK3BL2E5RIL1 263 aa8.38□□□□□ -1.07
LYST-204ENST00000462376 BPNT1O95861 308 aa8.38□□□□□ -1.07
LYST-204ENST00000462376 C8AP07357 584 aa8.38□□□□□ -1.07
LYST-204ENST00000462376 CYP7A1P22680 504 aa8.38□□□□□ -1.07
LYST-204ENST00000462376 ST13P50502 369 aaKnown RBP8.38□□□□□ -1.07
LYST-204ENST00000462376 PHC3Q8NDX5 983 aa8.38□□□□□ -1.07
LYST-204ENST00000462376 NOC4LQ9BVI4 516 aaKnown RBP8.38□□□□□ -1.07
LYST-204ENST00000462376 USP31Q70CQ4 1352 aa8.37□□□□□ -1.07
LYST-204ENST00000462376 PF4P02776 101 aa8.37□□□□□ -1.07
LYST-204ENST00000462376 ZNF865P0CJ78 1059 aaPredicted RBP8.37□□□□□ -1.07
LYST-204ENST00000462376 PLCG1P19174 1290 aa8.37□□□□□ -1.07
LYST-204ENST00000462376 GBP2P32456 591 aaPredicted RBP8.37□□□□□ -1.07
LYST-204ENST00000462376 FAM160A1Q05DH4 1040 aa8.37□□□□□ -1.07
LYST-204ENST00000462376 CAMK2GQ13555 558 aaPredicted RBP8.37□□□□□ -1.07
LYST-204ENST00000462376 KCNMB1Q16558 191 aa8.37□□□□□ -1.07
LYST-204ENST00000462376 CCDC27Q2M243 656 aa8.37□□□□□ -1.07
LYST-204ENST00000462376 DIEXFQ68CQ4 756 aaKnown RBP8.37□□□□□ -1.07
LYST-204ENST00000462376 FBXO33Q7Z6M2 555 aa8.37□□□□□ -1.07
LYST-204ENST00000462376 ACSF2Q96CM8 615 aaPredicted RBP8.37□□□□□ -1.07
LYST-204ENST00000462376 ST14Q9Y5Y6 855 aa8.37□□□□□ -1.07
LYST-204ENST00000462376 TNK2Q07912 1038 aa8.36□□□□□ -1.07
LYST-204ENST00000462376 ZNF124Q15973 351 aa8.36□□□□□ -1.07
LYST-204ENST00000462376 SLC6A19Q695T7 634 aa8.36□□□□□ -1.07
LYST-204ENST00000462376 RELL1Q8IUW5 271 aa8.36□□□□□ -1.07
LYST-204ENST00000462376 MCATQ8IVS2 390 aaKnown RBP8.36□□□□□ -1.07
LYST-204ENST00000462376 MRPL41Q8IXM3 137 aaKnown RBP8.36□□□□□ -1.07
LYST-204ENST00000462376 POU5F2Q8N7G0 328 aa8.36□□□□□ -1.07
LYST-204ENST00000462376 FAM13CQ8NE31 585 aa8.36□□□□□ -1.07
LYST-204ENST00000462376 CTNND2Q9UQB3 1225 aa8.36□□□□□ -1.07
LYST-204ENST00000462376 WASH4PA8MWX3 477 aa8.35□□□□□ -1.07
LYST-204ENST00000462376 F13A1P00488 732 aa8.35□□□□□ -1.07
LYST-204ENST00000462376 FYB2Q5VWT5 728 aa8.35□□□□□ -1.07
LYST-204ENST00000462376 ZSWIM9Q86XI8 627 aa8.35□□□□□ -1.07
LYST-204ENST00000462376 CRELD1Q96HD1 420 aa8.35□□□□□ -1.07
LYST-204ENST00000462376 TACC3Q9Y6A5 838 aa8.35□□□□□ -1.07
LYST-204ENST00000462376 GRIN3BO60391 1043 aa8.34□□□□□ -1.07
LYST-204ENST00000462376 FZD5Q13467 585 aa8.34□□□□□ -1.07
LYST-204ENST00000462376 FLAD1Q8NFF5 587 aa8.34□□□□□ -1.07
LYST-204ENST00000462376 TMEM40Q8WWA1 233 aa8.34□□□□□ -1.07
LYST-204ENST00000462376 KLHL3Q9UH77 587 aa8.34□□□□□ -1.07
LYST-204ENST00000462376 LRRC10BA6NIK2 292 aa8.33□□□□□ -1.08
LYST-204ENST00000462376 ETV3P41162 512 aa8.33□□□□□ -1.08
LYST-204ENST00000462376 MLANAQ16655 118 aa8.33□□□□□ -1.08
LYST-204ENST00000462376 SNAP47Q5SQN1 464 aa8.33□□□□□ -1.08
LYST-204ENST00000462376 C22orf34Q6ZV56 151 aa8.33□□□□□ -1.08
LYST-204ENST00000462376 LMCD1Q9NZU5 365 aa8.33□□□□□ -1.08
LYST-204ENST00000462376 SLAMF8Q9P0V8 285 aa8.33□□□□□ -1.08
LYST-204ENST00000462376 FARP2O94887 1054 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms