RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 BTBD19C9JJ37 291 aa12.68□□□□□ -0.38
TRAPPC12-213ENST00000461577 USP17L12C9JPN9 530 aa12.68□□□□□ -0.38
TRAPPC12-213ENST00000461577 USP17L21D6R901 530 aa12.68□□□□□ -0.38
TRAPPC12-213ENST00000461577 PDE4AP27815 886 aa12.68□□□□□ -0.38
TRAPPC12-213ENST00000461577 TDO2P48775 406 aa12.68□□□□□ -0.38
TRAPPC12-213ENST00000461577 TAF1CQ15572 869 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC12-213ENST00000461577 C12orf60Q5U649 245 aa12.68□□□□□ -0.38
TRAPPC12-213ENST00000461577 GADL1Q6ZQY3 521 aa12.68□□□□□ -0.38
TRAPPC12-213ENST00000461577 FASTKD5Q7L8L6 764 aaKnown RBP12.68□□□□□ -0.38
TRAPPC12-213ENST00000461577 FAM43AQ8N2R8 423 aa12.68□□□□□ -0.38
TRAPPC12-213ENST00000461577 ZNF280CQ8ND82 737 aa12.68□□□□□ -0.38
TRAPPC12-213ENST00000461577 CFHR5Q9BXR6 569 aa12.68□□□□□ -0.38
TRAPPC12-213ENST00000461577 NACAP1Q9BZK3 213 aa12.68□□□□□ -0.38
TRAPPC12-213ENST00000461577 ZFYVE28Q9HCC9 887 aa12.68□□□□□ -0.38
TRAPPC12-213ENST00000461577 ZCCHC17Q9NP64 241 aaKnown RBP12.68□□□□□ -0.38
TRAPPC12-213ENST00000461577 CABP5Q9NP86 173 aa12.68□□□□□ -0.38
TRAPPC12-213ENST00000461577 HELLSQ9NRZ9 838 aa12.68□□□□□ -0.38
TRAPPC12-213ENST00000461577 ARPP21Q9UBL0 812 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC12-213ENST00000461577 TAOK2Q9UL54 1235 aa12.68□□□□□ -0.38
TRAPPC12-213ENST00000461577 ZBTB21Q9ULJ3 1066 aa12.68□□□□□ -0.38
TRAPPC12-213ENST00000461577 PTPRFP10586 1907 aa12.67□□□□□ -0.38
TRAPPC12-213ENST00000461577 CYP2D7A0A087X1C5 515 aa12.67□□□□□ -0.38
TRAPPC12-213ENST00000461577 A0A0G2JLL6 359 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC12-213ENST00000461577 MINDY4BA8MYZ0 360 aa12.67□□□□□ -0.38
TRAPPC12-213ENST00000461577 GPR25O00155 361 aa12.67□□□□□ -0.38
TRAPPC12-213ENST00000461577 GH2P01242 217 aa12.67□□□□□ -0.38
TRAPPC12-213ENST00000461577 SHMT1P34896 483 aa12.67□□□□□ -0.38
TRAPPC12-213ENST00000461577 EVX2Q03828 476 aa12.67□□□□□ -0.38
TRAPPC12-213ENST00000461577 GABPAQ06546 454 aa12.67□□□□□ -0.38
TRAPPC12-213ENST00000461577 SPP2Q13103 211 aa12.67□□□□□ -0.38
TRAPPC12-213ENST00000461577 CRHR2Q13324 411 aa12.67□□□□□ -0.38
TRAPPC12-213ENST00000461577 ABCB5Q2M3G0 1257 aa12.67□□□□□ -0.38
TRAPPC12-213ENST00000461577 CTR9Q6PD62 1173 aa12.67□□□□□ -0.38
TRAPPC12-213ENST00000461577 CCDC129Q6ZRS4 1044 aa12.67□□□□□ -0.38
TRAPPC12-213ENST00000461577 CENPQQ7L2Z9 268 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC12-213ENST00000461577 PRRT2Q7Z6L0 340 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC12-213ENST00000461577 ANKRD23Q86SG2 305 aa12.67□□□□□ -0.38
TRAPPC12-213ENST00000461577 PDHXO00330 501 aa12.66□□□□□ -0.38
TRAPPC12-213ENST00000461577 MPHOSPH10O00566 681 aaKnown RBP12.66□□□□□ -0.38
TRAPPC12-213ENST00000461577 FKTNO75072 461 aa12.66□□□□□ -0.38
TRAPPC12-213ENST00000461577 RAB3GAP1Q15042 981 aa12.66□□□□□ -0.38
TRAPPC12-213ENST00000461577 MCMDC2Q4G0Z9 681 aa12.66□□□□□ -0.38
TRAPPC12-213ENST00000461577 SBK1Q52WX2 424 aa12.66□□□□□ -0.38
TRAPPC12-213ENST00000461577 NOM1Q5C9Z4 860 aaKnown RBP12.66□□□□□ -0.38
TRAPPC12-213ENST00000461577 IFNL3Q8IZI9 196 aa12.66□□□□□ -0.38
TRAPPC12-213ENST00000461577 DYNLL2Q96FJ2 89 aa12.66□□□□□ -0.38
TRAPPC12-213ENST00000461577 WDR18Q9BV38 432 aa12.66□□□□□ -0.38
TRAPPC12-213ENST00000461577 R3HDMLQ9H3Y0 253 aa12.66□□□□□ -0.38
TRAPPC12-213ENST00000461577 HIP1O00291 1037 aa12.65□□□□□ -0.38
TRAPPC12-213ENST00000461577 SDSP20132 328 aa12.65□□□□□ -0.38
TRAPPC12-213ENST00000461577 CDK8P49336 464 aa12.65□□□□□ -0.38
TRAPPC12-213ENST00000461577 JAG1P78504 1218 aa12.65□□□□□ -0.38
TRAPPC12-213ENST00000461577 NMIQ13287 307 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC12-213ENST00000461577 MOGSQ13724 837 aa12.65□□□□□ -0.38
TRAPPC12-213ENST00000461577 SHROOM1Q2M3G4 852 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC12-213ENST00000461577 TTC22Q5TAA0 569 aa12.65□□□□□ -0.38
TRAPPC12-213ENST00000461577 C16orf86Q6ZW13 317 aa12.65□□□□□ -0.38
TRAPPC12-213ENST00000461577 TNS4Q8IZW8 715 aa12.65□□□□□ -0.38
TRAPPC12-213ENST00000461577 STK11IPQ8N1F8 1099 aa12.65□□□□□ -0.38
TRAPPC12-213ENST00000461577 SLC44A5Q8NCS7 719 aa12.65□□□□□ -0.38
TRAPPC12-213ENST00000461577 ZNF296Q8WUU4 475 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC12-213ENST00000461577 CCDC136Q96JN2 1154 aa12.65□□□□□ -0.38
TRAPPC12-213ENST00000461577 FAM227BQ96M60 508 aa12.65□□□□□ -0.38
TRAPPC12-213ENST00000461577 NAPBQ9H115 298 aa12.65□□□□□ -0.38
TRAPPC12-213ENST00000461577 EPB41L4AQ9HCS5 686 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC12-213ENST00000461577 DIAPH3Q9NSV4 1193 aa12.65□□□□□ -0.38
TRAPPC12-213ENST00000461577 TMOD4Q9NZQ9 345 aa12.65□□□□□ -0.38
TRAPPC12-213ENST00000461577 A0A0D9SFI3 127 aa12.64□□□□□ -0.39
TRAPPC12-213ENST00000461577 C19orf81C9J6K1 198 aa12.64□□□□□ -0.39
TRAPPC12-213ENST00000461577 USP17L10C9JJH3 530 aa12.64□□□□□ -0.39
TRAPPC12-213ENST00000461577 HMGCS2P54868 508 aa12.64□□□□□ -0.39
TRAPPC12-213ENST00000461577 MFAP1P55081 439 aaKnown RBP12.64□□□□□ -0.39
TRAPPC12-213ENST00000461577 BACE1P56817 501 aa12.64□□□□□ -0.39
TRAPPC12-213ENST00000461577 MTMR2Q13614 643 aa12.64□□□□□ -0.39
TRAPPC12-213ENST00000461577 GPAT2Q6NUI2 795 aa12.64□□□□□ -0.39
TRAPPC12-213ENST00000461577 PROCA1Q8NCQ7 364 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC12-213ENST00000461577 CCDC17Q96LX7 622 aa12.64□□□□□ -0.39
TRAPPC12-213ENST00000461577 PARK7Q99497 189 aaKnown RBP12.64□□□□□ -0.39
TRAPPC12-213ENST00000461577 FEZ1Q99689 392 aa12.64□□□□□ -0.39
TRAPPC12-213ENST00000461577 MKNK2Q9HBH9 465 aa12.64□□□□□ -0.39
TRAPPC12-213ENST00000461577 AGTPBP1Q9UPW5 1226 aa12.64□□□□□ -0.39
TRAPPC12-213ENST00000461577 SMIM22K7EJ46 135 aa12.63□□□□□ -0.39
TRAPPC12-213ENST00000461577 SLC3A2P08195 630 aaKnown RBP12.63□□□□□ -0.39
TRAPPC12-213ENST00000461577 PABPC4Q13310 644 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRAPPC12-213ENST00000461577 DGKZQ13574 1117 aa12.63□□□□□ -0.39
TRAPPC12-213ENST00000461577 SEPT2Q15019 361 aa12.63□□□□□ -0.39
TRAPPC12-213ENST00000461577 SH3D19Q5HYK7 790 aa12.63□□□□□ -0.39
TRAPPC12-213ENST00000461577 TMEM179Q6ZVK1 233 aa12.63□□□□□ -0.39
TRAPPC12-213ENST00000461577 ERO1AQ96HE7 468 aa12.63□□□□□ -0.39
TRAPPC12-213ENST00000461577 ZNF287Q9HBT7 754 aa12.63□□□□□ -0.39
TRAPPC12-213ENST00000461577 PNMA3Q9UL41 463 aa12.63□□□□□ -0.39
TRAPPC12-213ENST00000461577 SLC45A1Q9Y2W3 748 aa12.63□□□□□ -0.39
TRAPPC12-213ENST00000461577 LOC285556D6RIA3 1793 aa12.63□□□□□ -0.39
TRAPPC12-213ENST00000461577 CCDC171Q6TFL3 1326 aa12.62□□□□□ -0.39
TRAPPC12-213ENST00000461577 TLR2O60603 784 aa12.62□□□□□ -0.39
TRAPPC12-213ENST00000461577 AKR1B1P15121 316 aa12.62□□□□□ -0.39
TRAPPC12-213ENST00000461577 GSPT1P15170 499 aaKnown RBP12.62□□□□□ -0.39
TRAPPC12-213ENST00000461577 OSBPP22059 807 aa12.62□□□□□ -0.39
TRAPPC12-213ENST00000461577 USP14P54578 494 aa12.62□□□□□ -0.39
TRAPPC12-213ENST00000461577 SP3Q02447 781 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms