RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 CELA3AP09093 270 aa8.2□□□□□ -1.1
CFHR3-204ENST00000461558 MAPK8P45983 427 aa8.2□□□□□ -1.1
CFHR3-204ENST00000461558 FMR1Q06787 632 aaKnown RBP eCLIP8.2□□□□□ -1.1
CFHR3-204ENST00000461558 SLBPQ14493 270 aaKnown RBP eCLIP8.2□□□□□ -1.1
CFHR3-204ENST00000461558 SFRP5Q5T4F7 317 aa8.2□□□□□ -1.1
CFHR3-204ENST00000461558 LRFN4Q6PJG9 635 aa8.2□□□□□ -1.1
CFHR3-204ENST00000461558 SETDB2Q96T68 719 aa8.2□□□□□ -1.1
CFHR3-204ENST00000461558 MIPEPQ99797 713 aa8.2□□□□□ -1.1
CFHR3-204ENST00000461558 ARID3AQ99856 593 aa8.2□□□□□ -1.1
CFHR3-204ENST00000461558 C19orf73Q9NVV2 129 aa8.2□□□□□ -1.1
CFHR3-204ENST00000461558 RAPGEFL1Q9UHV5 662 aa8.2□□□□□ -1.1
CFHR3-204ENST00000461558 CNTNAP4Q9C0A0 1308 aa8.2□□□□□ -1.1
CFHR3-204ENST00000461558 C1QTNF9P0C862 333 aa8.19□□□□□ -1.1
CFHR3-204ENST00000461558 GDNFP39905 211 aa8.19□□□□□ -1.1
CFHR3-204ENST00000461558 PTPN11Q06124 597 aaPredicted RBP8.19□□□□□ -1.1
CFHR3-204ENST00000461558 CDKAL1Q5VV42 579 aa8.19□□□□□ -1.1
CFHR3-204ENST00000461558 NPAS4Q8IUM7 802 aa8.19□□□□□ -1.1
CFHR3-204ENST00000461558 PLPPR2Q96GM1 343 aa8.19□□□□□ -1.1
CFHR3-204ENST00000461558 H3BS24 57 aa8.18□□□□□ -1.1
CFHR3-204ENST00000461558 FGD1P98174 961 aa8.18□□□□□ -1.1
CFHR3-204ENST00000461558 NKG7Q16617 165 aa8.18□□□□□ -1.1
CFHR3-204ENST00000461558 TMEM67Q5HYA8 995 aa8.18□□□□□ -1.1
CFHR3-204ENST00000461558 TTLL10Q6ZVT0 673 aa8.18□□□□□ -1.1
CFHR3-204ENST00000461558 HDXQ7Z353 690 aa8.18□□□□□ -1.1
CFHR3-204ENST00000461558 WNT10AQ9GZT5 417 aa8.18□□□□□ -1.1
CFHR3-204ENST00000461558 CAPN6Q9Y6Q1 641 aa8.18□□□□□ -1.1
CFHR3-204ENST00000461558 CAP2P40123 477 aa8.17□□□□□ -1.1
CFHR3-204ENST00000461558 ALG1LQ6GMV1 187 aa8.17□□□□□ -1.1
CFHR3-204ENST00000461558 MFSD2AQ8NA29 543 aa8.17□□□□□ -1.1
CFHR3-204ENST00000461558 FBXO15Q8NCQ5 510 aaPredicted RBP8.17□□□□□ -1.1
CFHR3-204ENST00000461558 ST14Q9Y5Y6 855 aa8.17□□□□□ -1.1
CFHR3-204ENST00000461558 KRT1P04264 644 aa8.16□□□□□ -1.1
CFHR3-204ENST00000461558 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.16□□□□□ -1.1
CFHR3-204ENST00000461558 GAL3ST3Q96A11 431 aa8.16□□□□□ -1.1
CFHR3-204ENST00000461558 C12orf49Q9H741 205 aa8.16□□□□□ -1.1
CFHR3-204ENST00000461558 WWC3Q9ULE0 1092 aa8.16□□□□□ -1.1
CFHR3-204ENST00000461558 BUD31P41223 144 aaPredicted RBP8.15□□□□□ -1.1
CFHR3-204ENST00000461558 ETF1P62495 437 aaKnown RBP8.15□□□□□ -1.1
CFHR3-204ENST00000461558 WIPI1Q5MNZ9 446 aaPredicted RBP8.15□□□□□ -1.1
CFHR3-204ENST00000461558 LETMD1Q6P1Q0 360 aa8.15□□□□□ -1.1
CFHR3-204ENST00000461558 THAP5Q7Z6K1 395 aa8.15□□□□□ -1.1
CFHR3-204ENST00000461558 HID1Q8IV36 788 aa8.15□□□□□ -1.1
CFHR3-204ENST00000461558 ZSCAN29Q8IWY8 852 aaPredicted RBP8.15□□□□□ -1.1
CFHR3-204ENST00000461558 RIN3Q8TB24 985 aa8.15□□□□□ -1.1
CFHR3-204ENST00000461558 FAM8A1Q9UBU6 413 aa8.15□□□□□ -1.1
CFHR3-204ENST00000461558 SPG7Q9UQ90 795 aa8.15□□□□□ -1.1
CFHR3-204ENST00000461558 BRD1O95696 1058 aa8.14□□□□□ -1.11
CFHR3-204ENST00000461558 USP17L7P0C7H9 530 aa8.14□□□□□ -1.11
CFHR3-204ENST00000461558 ZNF746Q6NUN9 644 aaPredicted RBP8.14□□□□□ -1.11
CFHR3-204ENST00000461558 CCDC120Q96HB5 630 aa8.14□□□□□ -1.11
CFHR3-204ENST00000461558 ALPK1Q96QP1 1244 aa8.14□□□□□ -1.11
CFHR3-204ENST00000461558 DIRC2Q96SL1 478 aa8.14□□□□□ -1.11
CFHR3-204ENST00000461558 NSUN3Q9H649 340 aaKnown RBP8.14□□□□□ -1.11
CFHR3-204ENST00000461558 SNCAIPQ9Y6H5 919 aa8.14□□□□□ -1.11
CFHR3-204ENST00000461558 CDK8P49336 464 aa8.13□□□□□ -1.11
CFHR3-204ENST00000461558 ATP2B2Q01814 1243 aa8.13□□□□□ -1.11
CFHR3-204ENST00000461558 PRAMEF13Q5VWM6 474 aa8.13□□□□□ -1.11
CFHR3-204ENST00000461558 SV2BQ7L1I2 683 aa8.13□□□□□ -1.11
CFHR3-204ENST00000461558 AMIGO3Q86WK7 504 aa8.13□□□□□ -1.11
CFHR3-204ENST00000461558 ASB16Q96NS5 453 aa8.13□□□□□ -1.11
CFHR3-204ENST00000461558 NPIPB6E9PJ23 425 aa8.12□□□□□ -1.11
CFHR3-204ENST00000461558 CBX7O95931 251 aa8.12□□□□□ -1.11
CFHR3-204ENST00000461558 CST3P01034 146 aaPredicted RBP8.12□□□□□ -1.11
CFHR3-204ENST00000461558 TMEM253P0C7T8 217 aa8.12□□□□□ -1.11
CFHR3-204ENST00000461558 UBE2FQ969M7 185 aa8.12□□□□□ -1.11
CFHR3-204ENST00000461558 KRTAP9-3Q9BYQ3 159 aa8.12□□□□□ -1.11
CFHR3-204ENST00000461558 INHBBP09529 407 aa8.11□□□□□ -1.11
CFHR3-204ENST00000461558 GRK4P32298 578 aa8.11□□□□□ -1.11
CFHR3-204ENST00000461558 TTBK2Q6IQ55 1244 aa8.11□□□□□ -1.11
CFHR3-204ENST00000461558 XAGE3Q8WTP9 111 aa8.11□□□□□ -1.11
CFHR3-204ENST00000461558 COX4I2Q96KJ9 171 aa8.11□□□□□ -1.11
CFHR3-204ENST00000461558 SLAMF8Q9P0V8 285 aa8.11□□□□□ -1.11
CFHR3-204ENST00000461558 ZSWIM5Q9P217 1185 aa8.11□□□□□ -1.11
CFHR3-204ENST00000461558 TTF2Q9UNY4 1162 aaKnown RBP8.11□□□□□ -1.11
CFHR3-204ENST00000461558 CYP7A1P22680 504 aa8.1□□□□□ -1.11
CFHR3-204ENST00000461558 KIR3DL1P43629 444 aa8.1□□□□□ -1.11
CFHR3-204ENST00000461558 TNK2Q07912 1038 aa8.1□□□□□ -1.11
CFHR3-204ENST00000461558 KCNA10Q16322 511 aa8.1□□□□□ -1.11
CFHR3-204ENST00000461558 CIAPIN1Q6FI81 312 aa8.1□□□□□ -1.11
CFHR3-204ENST00000461558 TTC6Q86TZ1 520 aa8.1□□□□□ -1.11
CFHR3-204ENST00000461558 RBAK-RBAKDNI3L0D1 243 aa8.09□□□□□ -1.11
CFHR3-204ENST00000461558 RAC2P15153 192 aa8.09□□□□□ -1.11
CFHR3-204ENST00000461558 CTSWP56202 376 aa8.09□□□□□ -1.11
CFHR3-204ENST00000461558 ABHD4Q8TB40 342 aa8.09□□□□□ -1.11
CFHR3-204ENST00000461558 EPB41L4BQ9H329 900 aa8.09□□□□□ -1.11
CFHR3-204ENST00000461558 CD320Q9NPF0 282 aa8.09□□□□□ -1.11
CFHR3-204ENST00000461558 TCAF2A6NFQ2 919 aa8.08□□□□□ -1.12
CFHR3-204ENST00000461558 ATG14Q6ZNE5 492 aa8.08□□□□□ -1.12
CFHR3-204ENST00000461558 CDH24Q86UP0 819 aa8.08□□□□□ -1.12
CFHR3-204ENST00000461558 DCP1AQ9NPI6 582 aaPredicted RBP8.08□□□□□ -1.12
CFHR3-204ENST00000461558 DNAJC25-GNG10A0A024R161 153 aa8.07□□□□□ -1.12
CFHR3-204ENST00000461558 GFRA2O00451 464 aa8.07□□□□□ -1.12
CFHR3-204ENST00000461558 ESR1P03372 595 aa8.07□□□□□ -1.12
CFHR3-204ENST00000461558 RPS26P62854 115 aaKnown RBP8.07□□□□□ -1.12
CFHR3-204ENST00000461558 SEPT6Q14141 434 aa8.07□□□□□ -1.12
CFHR3-204ENST00000461558 TMPRSS7Q7RTY8 843 aa8.07□□□□□ -1.12
CFHR3-204ENST00000461558 PIWIL2Q8TC59 973 aaKnown RBP8.07□□□□□ -1.12
CFHR3-204ENST00000461558 TACC3Q9Y6A5 838 aa8.07□□□□□ -1.12
CFHR3-204ENST00000461558 P4HBP07237 508 aaKnown RBP8.06□□□□□ -1.12
CFHR3-204ENST00000461558 MED14OSP0DP75 135 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms