RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 CHMP4BP1P59074 171 aa4.63□□□□□ -1.67
VCL-203ENST00000461383 PPM1JQ5JR12 505 aa4.63□□□□□ -1.67
VCL-203ENST00000461383 OVOS1Q6IE37 1185 aa4.63□□□□□ -1.67
VCL-203ENST00000461383 PRR23CQ6ZRP0 262 aa4.63□□□□□ -1.67
VCL-203ENST00000461383 ACAD11Q709F0 780 aa4.63□□□□□ -1.67
VCL-203ENST00000461383 CDC37L1Q7L3B6 337 aa4.63□□□□□ -1.67
VCL-203ENST00000461383 CYFIP1Q7L576 1253 aa4.63□□□□□ -1.67
VCL-203ENST00000461383 TMEM130Q8N3G9 435 aa4.63□□□□□ -1.67
VCL-203ENST00000461383 CELF2-AS1Q8N7Q2 184 aa4.63□□□□□ -1.67
VCL-203ENST00000461383 MEGF10Q96KG7 1140 aa4.63□□□□□ -1.67
VCL-203ENST00000461383 PUS7Q96PZ0 661 aaKnown RBP4.63□□□□□ -1.67
VCL-203ENST00000461383 RNF208Q9H0X6 261 aa4.63□□□□□ -1.67
VCL-203ENST00000461383 TNKS2Q9H2K2 1166 aa4.63□□□□□ -1.67
VCL-203ENST00000461383 ANTXR1Q9H6X2 564 aa4.63□□□□□ -1.67
VCL-203ENST00000461383 PIDD1Q9HB75 910 aa4.63□□□□□ -1.67
VCL-203ENST00000461383 SSU72Q9NP77 194 aaKnown RBP4.63□□□□□ -1.67
VCL-203ENST00000461383 KCNK4Q9NYG8 393 aa4.63□□□□□ -1.67
VCL-203ENST00000461383 HIF3AQ9Y2N7 669 aa4.63□□□□□ -1.67
VCL-203ENST00000461383 MRPL42Q9Y6G3 142 aaKnown RBP4.63□□□□□ -1.67
VCL-203ENST00000461383 ANKRD62A6NC57 917 aa4.62□□□□□ -1.67
VCL-203ENST00000461383 RAG1P15918 1043 aa4.62□□□□□ -1.67
VCL-203ENST00000461383 IREB2P48200 963 aaKnown RBP4.62□□□□□ -1.67
VCL-203ENST00000461383 YARSP54577 528 aaKnown RBP4.62□□□□□ -1.67
VCL-203ENST00000461383 CASP7P55210 303 aa4.62□□□□□ -1.67
VCL-203ENST00000461383 ERVK-24P63145 666 aa4.62□□□□□ -1.67
VCL-203ENST00000461383 ZC3H12AQ5D1E8 599 aaKnown RBP4.62□□□□□ -1.67
VCL-203ENST00000461383 FDX2Q6P4F2 183 aa4.62□□□□□ -1.67
VCL-203ENST00000461383 NLRC3Q7RTR2 1065 aa4.62□□□□□ -1.67
VCL-203ENST00000461383 LRP10Q7Z4F1 713 aa4.62□□□□□ -1.67
VCL-203ENST00000461383 NBPF11Q86T75 865 aa4.62□□□□□ -1.67
VCL-203ENST00000461383 TTC6Q86TZ1 520 aa4.62□□□□□ -1.67
VCL-203ENST00000461383 JAZF1Q86VZ6 243 aa4.62□□□□□ -1.67
VCL-203ENST00000461383 PHACTR4Q8IZ21 702 aa4.62□□□□□ -1.67
VCL-203ENST00000461383 C19orf47Q8N9M1 422 aaKnown RBP4.62□□□□□ -1.67
VCL-203ENST00000461383 C12orf50Q8NA57 414 aaPredicted RBP4.62□□□□□ -1.67
VCL-203ENST00000461383 FAM13CQ8NE31 585 aa4.62□□□□□ -1.67
VCL-203ENST00000461383 ZNF507Q8TCN5 953 aa4.62□□□□□ -1.67
VCL-203ENST00000461383 WNT10AQ9GZT5 417 aa4.62□□□□□ -1.67
VCL-203ENST00000461383 CCDC113Q9H0I3 377 aa4.62□□□□□ -1.67
VCL-203ENST00000461383 ATXN3LQ9H3M9 355 aa4.62□□□□□ -1.67
VCL-203ENST00000461383 ADAM30Q9UKF2 790 aa4.62□□□□□ -1.67
VCL-203ENST00000461383 TBX22Q9Y458 520 aa4.62□□□□□ -1.67
VCL-203ENST00000461383 PRR36Q9H6K5 1346 aa4.62□□□□□ -1.67
VCL-203ENST00000461383 A0A1W2PQH9 124 aa4.61□□□□□ -1.67
VCL-203ENST00000461383 FAM221BA6H8Z2 402 aa4.61□□□□□ -1.67
VCL-203ENST00000461383 SLC22A31A6NKX4 558 aa4.61□□□□□ -1.67
VCL-203ENST00000461383 MEIS3P2A8K0S8 358 aa4.61□□□□□ -1.67
VCL-203ENST00000461383 FANCGO15287 622 aa4.61□□□□□ -1.67
VCL-203ENST00000461383 PDPK1O15530 556 aa4.61□□□□□ -1.67
VCL-203ENST00000461383 RNGTTO60942 597 aaKnown RBP4.61□□□□□ -1.67
VCL-203ENST00000461383 GJB6O95452 261 aa4.61□□□□□ -1.67
VCL-203ENST00000461383 DLGAP3O95886 979 aa4.61□□□□□ -1.67
VCL-203ENST00000461383 RASA3Q14644 834 aa4.61□□□□□ -1.67
VCL-203ENST00000461383 MTERF2Q49AM1 385 aa4.61□□□□□ -1.67
VCL-203ENST00000461383 ARSHQ5FYA8 562 aa4.61□□□□□ -1.67
VCL-203ENST00000461383 TMEM201Q5SNT2 666 aa4.61□□□□□ -1.67
VCL-203ENST00000461383 VHLLQ6RSH7 139 aa4.61□□□□□ -1.67
VCL-203ENST00000461383 C6orf15Q6UXA7 325 aaPredicted RBP4.61□□□□□ -1.67
VCL-203ENST00000461383 DYMQ7RTS9 669 aa4.61□□□□□ -1.67
VCL-203ENST00000461383 KRTAP1-3Q8IUG1 177 aa4.61□□□□□ -1.67
VCL-203ENST00000461383 KCT2Q8NC54 265 aa4.61□□□□□ -1.67
VCL-203ENST00000461383 ATG4CQ96DT6 458 aa4.61□□□□□ -1.67
VCL-203ENST00000461383 MRPL18Q9H0U6 180 aaKnown RBP4.61□□□□□ -1.67
VCL-203ENST00000461383 PPP1R9AQ9ULJ8 1098 aa4.61□□□□□ -1.67
VCL-203ENST00000461383 CHURC1-FNTBB4DL54 471 aa4.6□□□□□ -1.67
VCL-203ENST00000461383 F8W735 103 aaPredicted RBP4.6□□□□□ -1.67
VCL-203ENST00000461383 PPM1GO15355 546 aaPredicted RBP4.6□□□□□ -1.67
VCL-203ENST00000461383 TMPRSS2O15393 492 aa4.6□□□□□ -1.67
VCL-203ENST00000461383 SART1O43290 800 aaKnown RBP4.6□□□□□ -1.67
VCL-203ENST00000461383 ADH5P11766 374 aa4.6□□□□□ -1.67
VCL-203ENST00000461383 HCLS1P14317 486 aaPredicted RBP4.6□□□□□ -1.67
VCL-203ENST00000461383 NME1P15531 152 aaKnown RBP4.6□□□□□ -1.67
VCL-203ENST00000461383 ZBTB37Q5TC79 503 aa4.6□□□□□ -1.67
VCL-203ENST00000461383 UNC5AQ6ZN44 842 aa4.6□□□□□ -1.67
VCL-203ENST00000461383 HID1Q8IV36 788 aa4.6□□□□□ -1.67
VCL-203ENST00000461383 FAM178BQ8IXR5 827 aa4.6□□□□□ -1.67
VCL-203ENST00000461383 ACSF2Q96CM8 615 aaPredicted RBP4.6□□□□□ -1.67
VCL-203ENST00000461383 FANCD2OSQ96PS1 177 aa4.6□□□□□ -1.67
VCL-203ENST00000461383 DNAJC7Q99615 494 aa4.6□□□□□ -1.67
VCL-203ENST00000461383 TMPRSS13Q9BYE2 586 aa4.6□□□□□ -1.67
VCL-203ENST00000461383 PHAXQ9H814 394 aaKnown RBP4.6□□□□□ -1.67
VCL-203ENST00000461383 AKTIPQ9H8T0 292 aa4.6□□□□□ -1.67
VCL-203ENST00000461383 CWC22Q9HCG8 908 aaKnown RBP4.6□□□□□ -1.67
VCL-203ENST00000461383 CRIM1Q9NZV1 1036 aa4.6□□□□□ -1.67
VCL-203ENST00000461383 SYNGAP1Q96PV0 1343 aa4.6□□□□□ -1.67
VCL-203ENST00000461383 B2RBV5 119 aa4.59□□□□□ -1.67
VCL-203ENST00000461383 TM4SF5O14894 197 aa4.59□□□□□ -1.67
VCL-203ENST00000461383 GAS2O43903 313 aaKnown RBP4.59□□□□□ -1.67
VCL-203ENST00000461383 WISP1O95388 367 aa4.59□□□□□ -1.67
VCL-203ENST00000461383 HSD3B2P26439 372 aa4.59□□□□□ -1.67
VCL-203ENST00000461383 GBP1P32455 592 aa4.59□□□□□ -1.67
VCL-203ENST00000461383 ASPAP45381 313 aa4.59□□□□□ -1.67
VCL-203ENST00000461383 RASGRF1Q13972 1273 aa4.59□□□□□ -1.67
VCL-203ENST00000461383 TTLL4Q14679 1199 aa4.59□□□□□ -1.67
VCL-203ENST00000461383 NCAPHQ15003 741 aa4.59□□□□□ -1.67
VCL-203ENST00000461383 GNPTABQ3T906 1256 aa4.59□□□□□ -1.67
VCL-203ENST00000461383 CDCP2Q5VXM1 449 aa4.59□□□□□ -1.67
VCL-203ENST00000461383 INTS3Q68E01 1043 aaKnown RBP4.59□□□□□ -1.67
VCL-203ENST00000461383 SLC6A19Q695T7 634 aa4.59□□□□□ -1.67
VCL-203ENST00000461383 KIAA1211Q6ZU35 1233 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms