RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 MX1P20591 662 aa18.55■□□□□ 0.56
VARS-219ENST00000461328 PSMC4P43686 418 aa18.55■□□□□ 0.56
VARS-219ENST00000461328 SLFNL1Q499Z3 407 aa18.55■□□□□ 0.56
VARS-219ENST00000461328 TREML2Q5T2D2 321 aa18.55■□□□□ 0.56
VARS-219ENST00000461328 LCORLQ8N3X6 602 aa18.55■□□□□ 0.56
VARS-219ENST00000461328 OTUD7AQ8TE49 926 aaPredicted RBP18.55■□□□□ 0.56
VARS-219ENST00000461328 WDR18Q9BV38 432 aa18.55■□□□□ 0.56
VARS-219ENST00000461328 EHD4Q9H223 541 aa18.55■□□□□ 0.56
VARS-219ENST00000461328 ARMT1Q9H993 441 aa18.55■□□□□ 0.56
VARS-219ENST00000461328 ZBTB21Q9ULJ3 1066 aa18.55■□□□□ 0.56
VARS-219ENST00000461328 ZSWIM8A7E2V4 1837 aa18.55■□□□□ 0.56
VARS-219ENST00000461328 GLRX3O76003 335 aaKnown RBP18.54■□□□□ 0.56
VARS-219ENST00000461328 POLR3DP05423 398 aaPredicted RBP18.54■□□□□ 0.56
VARS-219ENST00000461328 BCRP11274 1271 aa18.54■□□□□ 0.56
VARS-219ENST00000461328 PRMT2P55345 433 aa18.54■□□□□ 0.56
VARS-219ENST00000461328 IRX6P78412 446 aaPredicted RBP18.54■□□□□ 0.56
VARS-219ENST00000461328 JAG1P78504 1218 aa18.54■□□□□ 0.56
VARS-219ENST00000461328 PABPC4Q13310 644 aaKnown RBP eCLIP18.54■□□□□ 0.56
VARS-219ENST00000461328 MTMR2Q13614 643 aa18.54■□□□□ 0.56
VARS-219ENST00000461328 UBE3CQ15386 1083 aa18.54■□□□□ 0.56
VARS-219ENST00000461328 SHROOM1Q2M3G4 852 aaPredicted RBP18.54■□□□□ 0.56
VARS-219ENST00000461328 SLC9C1Q4G0N8 1177 aa18.54■□□□□ 0.56
VARS-219ENST00000461328 ARMC5Q96C12 935 aa18.54■□□□□ 0.56
VARS-219ENST00000461328 HOXD10P28358 340 aa18.53■□□□□ 0.56
VARS-219ENST00000461328 CTGFP29279 349 aa18.53■□□□□ 0.56
VARS-219ENST00000461328 FCGRTP55899 365 aa18.53■□□□□ 0.56
VARS-219ENST00000461328 SH3D19Q5HYK7 790 aa18.53■□□□□ 0.56
VARS-219ENST00000461328 KBTBD3Q8NAB2 608 aa18.53■□□□□ 0.56
VARS-219ENST00000461328 NAV1Q8NEY1 1877 aa18.53■□□□□ 0.56
VARS-219ENST00000461328 SDR42E1Q8WUS8 393 aa18.53■□□□□ 0.56
VARS-219ENST00000461328 TRIM47Q96LD4 638 aa18.53■□□□□ 0.56
VARS-219ENST00000461328 MCM9Q9NXL9 1143 aa18.53■□□□□ 0.56
VARS-219ENST00000461328 TMOD4Q9NZQ9 345 aa18.53■□□□□ 0.56
VARS-219ENST00000461328 HTTP42858 3142 aa18.53■□□□□ 0.56
VARS-219ENST00000461328 LOC285556D6RIA3 1793 aa18.53■□□□□ 0.56
VARS-219ENST00000461328 GH2P01242 217 aa18.52■□□□□ 0.56
VARS-219ENST00000461328 CHGBP05060 677 aa18.52■□□□□ 0.56
VARS-219ENST00000461328 OSBPP22059 807 aa18.52■□□□□ 0.56
VARS-219ENST00000461328 PLCD1P51178 756 aa18.52■□□□□ 0.56
VARS-219ENST00000461328 BACE1P56817 501 aa18.52■□□□□ 0.56
VARS-219ENST00000461328 LRRFIP1Q32MZ4 808 aaKnown RBP18.52■□□□□ 0.56
VARS-219ENST00000461328 TATDN1Q6P1N9 297 aa18.52■□□□□ 0.56
VARS-219ENST00000461328 NBPF11Q86T75 865 aa18.52■□□□□ 0.56
VARS-219ENST00000461328 DDRGK1Q96HY6 314 aa18.52■□□□□ 0.56
VARS-219ENST00000461328 DDX60LQ5H9U9 1706 aaKnown RBP18.52■□□□□ 0.55
VARS-219ENST00000461328 USP17L10C9JJH3 530 aa18.51■□□□□ 0.55
VARS-219ENST00000461328 CERKLQ49MI3 558 aaPredicted RBP18.51■□□□□ 0.55
VARS-219ENST00000461328 B4GALNT3Q6L9W6 998 aa18.51■□□□□ 0.55
VARS-219ENST00000461328 PI4K2BQ8TCG2 481 aa18.51■□□□□ 0.55
VARS-219ENST00000461328 FSD1Q9BTV5 496 aa18.51■□□□□ 0.55
VARS-219ENST00000461328 LNPKQ9C0E8 428 aa18.51■□□□□ 0.55
VARS-219ENST00000461328 DCP1AQ9NPI6 582 aaPredicted RBP18.51■□□□□ 0.55
VARS-219ENST00000461328 SRRDQ9UH36 339 aa18.51■□□□□ 0.55
VARS-219ENST00000461328 MYH7P12883 1935 aa18.51■□□□□ 0.55
VARS-219ENST00000461328 MYPNQ86TC9 1320 aa18.5■□□□□ 0.55
VARS-219ENST00000461328 C19orf81C9J6K1 198 aa18.5■□□□□ 0.55
VARS-219ENST00000461328 ABCB5Q2M3G0 1257 aa18.5■□□□□ 0.55
VARS-219ENST00000461328 AMOTL1Q8IY63 956 aa18.5■□□□□ 0.55
VARS-219ENST00000461328 ANKRD13CQ8N6S4 541 aa18.5■□□□□ 0.55
VARS-219ENST00000461328 RAET1EQ8TD07 263 aa18.5■□□□□ 0.55
VARS-219ENST00000461328 ZNF333Q96JL9 665 aa18.5■□□□□ 0.55
VARS-219ENST00000461328 FEZ1Q99689 392 aa18.5■□□□□ 0.55
VARS-219ENST00000461328 ASCC2Q9H1I8 757 aaPredicted RBP18.5■□□□□ 0.55
VARS-219ENST00000461328 CABP5Q9NP86 173 aa18.5■□□□□ 0.55
VARS-219ENST00000461328 PRKAB2O43741 272 aa18.49■□□□□ 0.55
VARS-219ENST00000461328 ZFYP08048 801 aaPredicted RBP18.49■□□□□ 0.55
VARS-219ENST00000461328 SHMT1P34896 483 aa18.49■□□□□ 0.55
VARS-219ENST00000461328 IRX3P78415 501 aaPredicted RBP18.49■□□□□ 0.55
VARS-219ENST00000461328 RAB3GAP1Q15042 981 aa18.49■□□□□ 0.55
VARS-219ENST00000461328 SH3TC2Q8TF17 1288 aa18.49■□□□□ 0.55
VARS-219ENST00000461328 APPBP2Q92624 585 aa18.49■□□□□ 0.55
VARS-219ENST00000461328 PUS7LQ9H0K6 701 aaKnown RBP18.49■□□□□ 0.55
VARS-219ENST00000461328 ATP8A2Q9NTI2 1148 aa18.49■□□□□ 0.55
VARS-219ENST00000461328 SLC4A4Q9Y6R1 1079 aa18.49■□□□□ 0.55
VARS-219ENST00000461328 POTEFA5A3E0 1075 aa18.48■□□□□ 0.55
VARS-219ENST00000461328 RNF113AO15541 343 aaKnown RBP18.48■□□□□ 0.55
VARS-219ENST00000461328 MYCP01106 439 aaPredicted RBP18.48■□□□□ 0.55
VARS-219ENST00000461328 IGHDP01880 384 aa18.48■□□□□ 0.55
VARS-219ENST00000461328 CYP2D6P10635 497 aa18.48■□□□□ 0.55
VARS-219ENST00000461328 GCLCP48506 637 aaPredicted RBP18.48■□□□□ 0.55
VARS-219ENST00000461328 GABPAQ06546 454 aa18.48■□□□□ 0.55
VARS-219ENST00000461328 FAM110CQ1W6H9 321 aa18.48■□□□□ 0.55
VARS-219ENST00000461328 USP17L2Q6R6M4 530 aa18.48■□□□□ 0.55
VARS-219ENST00000461328 SMC5Q8IY18 1101 aa18.48■□□□□ 0.55
VARS-219ENST00000461328 TMEM106CQ9BVX2 250 aa18.48■□□□□ 0.55
VARS-219ENST00000461328 TNPO2O14787 897 aaKnown RBP18.47■□□□□ 0.55
VARS-219ENST00000461328 EVX2Q03828 476 aa18.47■□□□□ 0.55
VARS-219ENST00000461328 PRKCZQ05513 592 aa18.47■□□□□ 0.55
VARS-219ENST00000461328 SALL3Q9BXA9 1300 aa18.47■□□□□ 0.55
VARS-219ENST00000461328 MPHOSPH10O00566 681 aaKnown RBP18.46■□□□□ 0.55
VARS-219ENST00000461328 HOXA7P31268 230 aaPredicted RBP18.46■□□□□ 0.55
VARS-219ENST00000461328 PDE1AP54750 535 aa18.46■□□□□ 0.55
VARS-219ENST00000461328 ZYXQ15942 572 aaKnown RBP18.46■□□□□ 0.55
VARS-219ENST00000461328 SWAP70Q9UH65 585 aa18.46■□□□□ 0.55
VARS-219ENST00000461328 MGAMO43451 1857 aa18.46■□□□□ 0.54
VARS-219ENST00000461328 GRK4P32298 578 aa18.45■□□□□ 0.54
VARS-219ENST00000461328 CHD1LQ86WJ1 897 aa18.45■□□□□ 0.54
VARS-219ENST00000461328 SLC44A5Q8NCS7 719 aa18.45■□□□□ 0.54
VARS-219ENST00000461328 OSBP2Q969R2 916 aa18.45■□□□□ 0.54
VARS-219ENST00000461328 COA7Q96BR5 231 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms