RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 CREB3L3Q68CJ9 461 aa9.73□□□□□ -0.85
HDAC9-219ENST00000461159 DRC7Q8IY82 874 aa9.73□□□□□ -0.85
HDAC9-219ENST00000461159 JAKMIP1Q96N16 626 aaKnown RBP9.73□□□□□ -0.85
HDAC9-219ENST00000461159 IRAK4Q9NWZ3 460 aa9.73□□□□□ -0.85
HDAC9-219ENST00000461159 FAM53CQ9NYF3 392 aa9.73□□□□□ -0.85
HDAC9-219ENST00000461159 XDHP47989 1333 aa9.73□□□□□ -0.85
HDAC9-219ENST00000461159 SMTNL1A8MU46 457 aa9.73□□□□□ -0.85
HDAC9-219ENST00000461159 SLC27A2O14975 620 aa9.73□□□□□ -0.85
HDAC9-219ENST00000461159 NPR1P16066 1061 aa9.73□□□□□ -0.85
HDAC9-219ENST00000461159 PDE6AP16499 860 aa9.73□□□□□ -0.85
HDAC9-219ENST00000461159 PTGS1P23219 599 aa9.73□□□□□ -0.85
HDAC9-219ENST00000461159 TYRO3Q06418 890 aa9.73□□□□□ -0.85
HDAC9-219ENST00000461159 TRAF1Q13077 416 aa9.73□□□□□ -0.85
HDAC9-219ENST00000461159 GRIK5Q16478 980 aa9.73□□□□□ -0.85
HDAC9-219ENST00000461159 DOK7Q18PE1 504 aa9.73□□□□□ -0.85
HDAC9-219ENST00000461159 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.73□□□□□ -0.85
HDAC9-219ENST00000461159 FBXO33Q7Z6M2 555 aa9.73□□□□□ -0.85
HDAC9-219ENST00000461159 ADGRA1Q86SQ6 560 aa9.73□□□□□ -0.85
HDAC9-219ENST00000461159 TBC1D16Q8TBP0 767 aa9.73□□□□□ -0.85
HDAC9-219ENST00000461159 FBXW7Q969H0 707 aa9.73□□□□□ -0.85
HDAC9-219ENST00000461159 MASTLQ96GX5 879 aa9.73□□□□□ -0.85
HDAC9-219ENST00000461159 GGA1Q9UJY5 639 aa9.73□□□□□ -0.85
HDAC9-219ENST00000461159 ELP1O95163 1332 aa9.73□□□□□ -0.85
HDAC9-219ENST00000461159 GOLGA6L4A6NEF3 574 aa9.72□□□□□ -0.85
HDAC9-219ENST00000461159 LARGE1O95461 756 aa9.72□□□□□ -0.85
HDAC9-219ENST00000461159 ZKSCAN1P17029 563 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-219ENST00000461159 GET4Q7L5D6 327 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-219ENST00000461159 C10orf67Q8IYJ2 551 aa9.72□□□□□ -0.85
HDAC9-219ENST00000461159 CXorf38Q8TB03 319 aa9.72□□□□□ -0.85
HDAC9-219ENST00000461159 CRAMP1Q96RY5 1269 aa9.72□□□□□ -0.85
HDAC9-219ENST00000461159 ZSWIM6Q9HCJ5 1215 aa9.72□□□□□ -0.85
HDAC9-219ENST00000461159 ARAP2Q8WZ64 1704 aa9.72□□□□□ -0.85
HDAC9-219ENST00000461159 CACNA1SQ13698 1873 aa9.72□□□□□ -0.85
HDAC9-219ENST00000461159 GPAA1O43292 621 aa9.72□□□□□ -0.85
HDAC9-219ENST00000461159 C21orf2O43822 256 aa9.72□□□□□ -0.85
HDAC9-219ENST00000461159 KINO60870 393 aaKnown RBP9.72□□□□□ -0.85
HDAC9-219ENST00000461159 CYP21A2P08686 494 aa9.72□□□□□ -0.85
HDAC9-219ENST00000461159 HSPD1P10809 573 aaKnown RBP9.72□□□□□ -0.85
HDAC9-219ENST00000461159 ADD2P35612 726 aa9.72□□□□□ -0.85
HDAC9-219ENST00000461159 SLC4A8Q2Y0W8 1093 aa9.72□□□□□ -0.85
HDAC9-219ENST00000461159 LARP1BQ659C4 914 aaKnown RBP9.72□□□□□ -0.85
HDAC9-219ENST00000461159 TXLNBQ8N3L3 684 aa9.72□□□□□ -0.85
HDAC9-219ENST00000461159 ZNF512BQ96KM6 892 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-219ENST00000461159 MXD3Q9BW11 206 aa9.72□□□□□ -0.85
HDAC9-219ENST00000461159 TNMDQ9H2S6 317 aa9.72□□□□□ -0.85
HDAC9-219ENST00000461159 KCNQ5Q9NR82 932 aa9.72□□□□□ -0.85
HDAC9-219ENST00000461159 DDX19AQ9NUU7 478 aaKnown RBP9.72□□□□□ -0.85
HDAC9-219ENST00000461159 ZNF446Q9NWS9 450 aa9.72□□□□□ -0.85
HDAC9-219ENST00000461159 PRKAB2O43741 272 aa9.71□□□□□ -0.85
HDAC9-219ENST00000461159 AP1ARQ63HQ0 302 aa9.71□□□□□ -0.85
HDAC9-219ENST00000461159 CCDC186Q7Z3E2 898 aa9.71□□□□□ -0.85
HDAC9-219ENST00000461159 NKX2-3Q8TAU0 364 aa9.71□□□□□ -0.85
HDAC9-219ENST00000461159 ZNF384Q8TF68 577 aa9.71□□□□□ -0.85
HDAC9-219ENST00000461159 SCAND2PQ9GZW5 306 aaPredicted RBP9.71□□□□□ -0.85
HDAC9-219ENST00000461159 ARMT1Q9H993 441 aa9.71□□□□□ -0.85
HDAC9-219ENST00000461159 GNL3LQ9NVN8 582 aaKnown RBP9.71□□□□□ -0.85
HDAC9-219ENST00000461159 CHCHD3Q9NX63 227 aaKnown RBP9.71□□□□□ -0.85
HDAC9-219ENST00000461159 ATP6V0A2Q9Y487 856 aa9.71□□□□□ -0.85
HDAC9-219ENST00000461159 MYH7P12883 1935 aa9.71□□□□□ -0.85
HDAC9-219ENST00000461159 TCRBV5S4A2TA0A5A2 114 aa9.71□□□□□ -0.86
HDAC9-219ENST00000461159 SMIM22K7EJ46 135 aa9.71□□□□□ -0.86
HDAC9-219ENST00000461159 PSMA5P28066 241 aa9.71□□□□□ -0.86
HDAC9-219ENST00000461159 ALDH1B1P30837 517 aa9.71□□□□□ -0.86
HDAC9-219ENST00000461159 MAP3K12Q12852 859 aa9.71□□□□□ -0.86
HDAC9-219ENST00000461159 DPP8Q6V1X1 898 aaPredicted RBP9.71□□□□□ -0.86
HDAC9-219ENST00000461159 STOX1Q6ZVD7 989 aa9.71□□□□□ -0.86
HDAC9-219ENST00000461159 TRIM74Q86UV6 250 aa9.71□□□□□ -0.86
HDAC9-219ENST00000461159 TRIM73Q86UV7 250 aa9.71□□□□□ -0.86
HDAC9-219ENST00000461159 KIF18AQ8NI77 898 aa9.71□□□□□ -0.86
HDAC9-219ENST00000461159 KCNB2Q92953 911 aa9.71□□□□□ -0.86
HDAC9-219ENST00000461159 TRIM5Q9C035 493 aa9.71□□□□□ -0.86
HDAC9-219ENST00000461159 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.71□□□□□ -0.86
HDAC9-219ENST00000461159 SYNPO2Q9UMS6 1093 aa9.71□□□□□ -0.86
HDAC9-219ENST00000461159 ZNF232Q9UNY5 417 aa9.71□□□□□ -0.86
HDAC9-219ENST00000461159 IRS2Q9Y4H2 1338 aa9.71□□□□□ -0.86
HDAC9-219ENST00000461159 F8W031 263 aaPredicted RBP9.7□□□□□ -0.86
HDAC9-219ENST00000461159 MBD4O95243 580 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 DPEP1P16444 411 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 CYP7A1P22680 504 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 TTF1Q15361 905 aaPredicted RBP9.7□□□□□ -0.86
HDAC9-219ENST00000461159 DIXDC1Q155Q3 683 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 WWC2Q6AWC2 1192 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 CHST3Q7LGC8 479 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 TTC6Q86TZ1 520 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 LUZP1Q86V48 1076 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 CCDC125Q86Z20 511 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 SNRNP27Q8WVK2 155 aaKnown RBP9.7□□□□□ -0.86
HDAC9-219ENST00000461159 APPBP2Q92624 585 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 LRRC2Q9BYS8 371 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 DBNDD1Q9H9R9 158 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 HELLSQ9NRZ9 838 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 DENND2AQ9ULE3 1009 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 FRMD4BQ9Y2L6 1034 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 LEMD3Q9Y2U8 911 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 COL11A2P13942 1736 aaPredicted RBP9.7□□□□□ -0.86
HDAC9-219ENST00000461159 CAVIN2O95810 425 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 PAX3P23760 479 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 ZNF75DP51815 510 aa9.7□□□□□ -0.86
HDAC9-219ENST00000461159 DYNLL1P63167 89 aaKnown RBP9.7□□□□□ -0.86
HDAC9-219ENST00000461159 NCBP1Q09161 790 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms