RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 CCDC129Q6ZRS4 1044 aa19.42■□□□□ 0.7
SHANK1-205ENST00000461154 PTPN18Q99952 460 aa19.42■□□□□ 0.7
SHANK1-205ENST00000461154 DNAJC18Q9H819 358 aa19.42■□□□□ 0.7
SHANK1-205ENST00000461154 SWAP70Q9UH65 585 aa19.42■□□□□ 0.7
SHANK1-205ENST00000461154 CXCL11O14625 94 aa19.41■□□□□ 0.7
SHANK1-205ENST00000461154 PTPRAP18433 802 aa19.41■□□□□ 0.7
SHANK1-205ENST00000461154 SBK1Q52WX2 424 aa19.41■□□□□ 0.7
SHANK1-205ENST00000461154 CTR9Q6PD62 1173 aa19.41■□□□□ 0.7
SHANK1-205ENST00000461154 IFNL3Q8IZI9 196 aa19.41■□□□□ 0.7
SHANK1-205ENST00000461154 BRI3BPQ8WY22 251 aa19.41■□□□□ 0.7
SHANK1-205ENST00000461154 NAPBQ9H115 298 aa19.41■□□□□ 0.7
SHANK1-205ENST00000461154 GINM1Q9NU53 330 aa19.41■□□□□ 0.7
SHANK1-205ENST00000461154 KCNH4Q9UQ05 1017 aa19.41■□□□□ 0.7
SHANK1-205ENST00000461154 ZHX2Q9Y6X8 837 aa19.41■□□□□ 0.7
SHANK1-205ENST00000461154 CCDC171Q6TFL3 1326 aa19.41■□□□□ 0.7
SHANK1-205ENST00000461154 LAMB1P07942 1786 aa19.4■□□□□ 0.7
SHANK1-205ENST00000461154 ATAD5Q96QE3 1844 aa19.4■□□□□ 0.7
SHANK1-205ENST00000461154 GPR25O00155 361 aa19.4■□□□□ 0.7
SHANK1-205ENST00000461154 CYP2D6P10635 497 aa19.4■□□□□ 0.7
SHANK1-205ENST00000461154 CAP2P40123 477 aa19.4■□□□□ 0.7
SHANK1-205ENST00000461154 BMP2KLQ5H9B9 411 aa19.4■□□□□ 0.7
SHANK1-205ENST00000461154 TATDN1Q6P1N9 297 aa19.4■□□□□ 0.7
SHANK1-205ENST00000461154 RUFY2Q8WXA3 655 aa19.4■□□□□ 0.7
SHANK1-205ENST00000461154 EPB41L4AQ9HCS5 686 aaPredicted RBP19.4■□□□□ 0.7
SHANK1-205ENST00000461154 ASNSP08243 561 aa19.39■□□□□ 0.69
SHANK1-205ENST00000461154 GABPAQ06546 454 aa19.39■□□□□ 0.69
SHANK1-205ENST00000461154 ZNF589Q86UQ0 364 aaPredicted RBP19.39■□□□□ 0.69
SHANK1-205ENST00000461154 SKAP1Q86WV1 359 aa19.39■□□□□ 0.69
SHANK1-205ENST00000461154 TBC1D2Q9BYX2 928 aa19.39■□□□□ 0.69
SHANK1-205ENST00000461154 ZCCHC17Q9NP64 241 aaKnown RBP19.39■□□□□ 0.69
SHANK1-205ENST00000461154 RAD50Q92878 1312 aa19.39■□□□□ 0.69
SHANK1-205ENST00000461154 CYP2D7A0A087X1C5 515 aa19.38■□□□□ 0.69
SHANK1-205ENST00000461154 MINDY4BA8MYZ0 360 aa19.38■□□□□ 0.69
SHANK1-205ENST00000461154 SHMT1P34896 483 aa19.38■□□□□ 0.69
SHANK1-205ENST00000461154 CERKLQ49MI3 558 aaPredicted RBP19.38■□□□□ 0.69
SHANK1-205ENST00000461154 AFG3L2Q9Y4W6 797 aa19.38■□□□□ 0.69
SHANK1-205ENST00000461154 MYH8P13535 1937 aa19.37■□□□□ 0.69
SHANK1-205ENST00000461154 FKTNO75072 461 aa19.37■□□□□ 0.69
SHANK1-205ENST00000461154 SLC3A2P08195 630 aaKnown RBP19.37■□□□□ 0.69
SHANK1-205ENST00000461154 CHMLP26374 656 aa19.37■□□□□ 0.69
SHANK1-205ENST00000461154 ALX1Q15699 326 aa19.37■□□□□ 0.69
SHANK1-205ENST00000461154 C16orf86Q6ZW13 317 aa19.37■□□□□ 0.69
SHANK1-205ENST00000461154 FAM43AQ8N2R8 423 aa19.37■□□□□ 0.69
SHANK1-205ENST00000461154 ZNF296Q8WUU4 475 aaPredicted RBP19.37■□□□□ 0.69
SHANK1-205ENST00000461154 DYNLL2Q96FJ2 89 aa19.37■□□□□ 0.69
SHANK1-205ENST00000461154 R3HDMLQ9H3Y0 253 aa19.37■□□□□ 0.69
SHANK1-205ENST00000461154 ZNF287Q9HBT7 754 aa19.37■□□□□ 0.69
SHANK1-205ENST00000461154 ZFYVE28Q9HCC9 887 aa19.37■□□□□ 0.69
SHANK1-205ENST00000461154 CABP5Q9NP86 173 aa19.37■□□□□ 0.69
SHANK1-205ENST00000461154 ROBO3Q96MS0 1386 aa19.36■□□□□ 0.69
SHANK1-205ENST00000461154 ZMYM6O95789 1325 aa19.36■□□□□ 0.69
SHANK1-205ENST00000461154 BTBD19C9JJ37 291 aa19.36■□□□□ 0.69
SHANK1-205ENST00000461154 GDF11O95390 407 aa19.36■□□□□ 0.69
SHANK1-205ENST00000461154 HSPD1P10809 573 aaKnown RBP19.36■□□□□ 0.69
SHANK1-205ENST00000461154 EVX2Q03828 476 aa19.36■□□□□ 0.69
SHANK1-205ENST00000461154 CRHR2Q13324 411 aa19.36■□□□□ 0.69
SHANK1-205ENST00000461154 RRP1BQ14684 758 aaKnown RBP19.36■□□□□ 0.69
SHANK1-205ENST00000461154 TAF1CQ15572 869 aaPredicted RBP19.36■□□□□ 0.69
SHANK1-205ENST00000461154 ABCB5Q2M3G0 1257 aa19.36■□□□□ 0.69
SHANK1-205ENST00000461154 VPS53Q5VIR6 699 aa19.36■□□□□ 0.69
SHANK1-205ENST00000461154 FASTKD5Q7L8L6 764 aaKnown RBP19.36■□□□□ 0.69
SHANK1-205ENST00000461154 ANKRD23Q86SG2 305 aa19.36■□□□□ 0.69
SHANK1-205ENST00000461154 AS3MTQ9HBK9 375 aa19.36■□□□□ 0.69
SHANK1-205ENST00000461154 ZBTB21Q9ULJ3 1066 aa19.36■□□□□ 0.69
SHANK1-205ENST00000461154 CASP8AP2Q9UKL3 1982 aa19.35■□□□□ 0.69
SHANK1-205ENST00000461154 USP17L5A8MUK1 530 aa19.35■□□□□ 0.69
SHANK1-205ENST00000461154 FOXP2O15409 715 aa19.35■□□□□ 0.69
SHANK1-205ENST00000461154 CDK8P49336 464 aa19.35■□□□□ 0.69
SHANK1-205ENST00000461154 CCDC17Q96LX7 622 aa19.35■□□□□ 0.69
SHANK1-205ENST00000461154 A0A0G2JLL6 359 aaPredicted RBP19.34■□□□□ 0.69
SHANK1-205ENST00000461154 GH2P01242 217 aa19.34■□□□□ 0.69
SHANK1-205ENST00000461154 PPARAQ07869 468 aa19.34■□□□□ 0.69
SHANK1-205ENST00000461154 DGKZQ13574 1117 aa19.34■□□□□ 0.69
SHANK1-205ENST00000461154 PRRT2Q7Z6L0 340 aaPredicted RBP19.34■□□□□ 0.69
SHANK1-205ENST00000461154 CTU1Q7Z7A3 348 aaKnown RBP19.34■□□□□ 0.69
SHANK1-205ENST00000461154 SLC44A5Q8NCS7 719 aa19.34■□□□□ 0.69
SHANK1-205ENST00000461154 PHIPQ8WWQ0 1821 aa19.34■□□□□ 0.69
SHANK1-205ENST00000461154 MPHOSPH10O00566 681 aaKnown RBP19.33■□□□□ 0.68
SHANK1-205ENST00000461154 FGAP02671 866 aa19.33■□□□□ 0.68
SHANK1-205ENST00000461154 PDE4BQ07343 736 aa19.33■□□□□ 0.68
SHANK1-205ENST00000461154 CASC1Q6TDU7 716 aa19.33■□□□□ 0.68
SHANK1-205ENST00000461154 ZNF280CQ8ND82 737 aa19.33■□□□□ 0.68
SHANK1-205ENST00000461154 DSCC1Q9BVC3 393 aa19.33■□□□□ 0.68
SHANK1-205ENST00000461154 MKNK2Q9HBH9 465 aa19.33■□□□□ 0.68
SHANK1-205ENST00000461154 TRIM75PA6NK02 468 aa19.32■□□□□ 0.68
SHANK1-205ENST00000461154 SMIM22K7EJ46 135 aa19.32■□□□□ 0.68
SHANK1-205ENST00000461154 PDHXO00330 501 aa19.32■□□□□ 0.68
SHANK1-205ENST00000461154 SPP2Q13103 211 aa19.32■□□□□ 0.68
SHANK1-205ENST00000461154 MOGSQ13724 837 aa19.32■□□□□ 0.68
SHANK1-205ENST00000461154 TMEM179Q6ZVK1 233 aa19.32■□□□□ 0.68
SHANK1-205ENST00000461154 CCDC84Q86UT8 332 aaPredicted RBP19.32■□□□□ 0.68
SHANK1-205ENST00000461154 WDR18Q9BV38 432 aa19.32■□□□□ 0.68
SHANK1-205ENST00000461154 MCOLN1Q9GZU1 580 aa19.32■□□□□ 0.68
SHANK1-205ENST00000461154 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.32■□□□□ 0.68
SHANK1-205ENST00000461154 ANAPC4Q9UJX5 808 aa19.32■□□□□ 0.68
SHANK1-205ENST00000461154 SGSM2O43147 1006 aa19.31■□□□□ 0.68
SHANK1-205ENST00000461154 TLR2O60603 784 aa19.31■□□□□ 0.68
SHANK1-205ENST00000461154 CDC45O75419 566 aa19.31■□□□□ 0.68
SHANK1-205ENST00000461154 JAG1P78504 1218 aa19.31■□□□□ 0.68
SHANK1-205ENST00000461154 SP3Q02447 781 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms