RNA–Protein interactions for RNA: ENST00000461074.1

MCF2L2-205, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 7,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-205ENST00000461074 KIF22Q14807 665 aa9.4□□□□□ -0.91
MCF2L2-205ENST00000461074 CUEDC2Q9H467 287 aa9.4□□□□□ -0.91
MCF2L2-205ENST00000461074 NOC2LQ9Y3T9 749 aaKnown RBP9.4□□□□□ -0.91
MCF2L2-205ENST00000461074 GOLGA8CPA6NN73 597 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 SLC27A2O14975 620 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 ZBTB7BO15156 539 aaPredicted RBP9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 GPAA1O43292 621 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 DDAH1O94760 285 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 CDC37L1Q7L3B6 337 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 ZNF277Q9NRM2 450 aaPredicted RBP9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 PCDHB13Q9Y5F0 798 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 ERICH4A6NGS2 130 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 E7EVH7 732 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 ANXA1P04083 346 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 LETM2Q2VYF4 491 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 NAPGQ99747 312 aaPredicted RBP9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 CSADQ9Y600 493 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 SPOPO43791 374 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 CALCRLQ16602 461 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 REXO1Q8N1G1 1221 aaKnown RBP9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 SMC1BQ8NDV3 1235 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 ZNF274Q96GC6 653 aaPredicted RBP9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 CLSTN2Q9H4D0 955 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 IFT122Q9HBG6 1241 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 GDPD2Q9HCC8 539 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 EFCAB6Q5THR3 1501 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 MYOM2P54296 1465 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 WDR17Q8IZU2 1322 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 SGSM2O43147 1006 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 CIB2O75838 187 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 SARNPP82979 210 aaKnown RBP9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 DLGAP5Q15398 846 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 OTUD7BQ6GQQ9 843 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 ZNF365Q70YC5 407 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 MIGA1Q8NAN2 632 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 P3H4Q92791 437 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 CARD10Q9BWT7 1032 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 TRPC6Q9Y210 931 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 PSDA5PKW4 1024 aaPredicted RBP9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 ARL1P40616 181 aaPredicted RBP9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 CCDC122Q5T0U0 273 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 CC2D2BQ6DHV5 1058 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 MPNDQ8N594 471 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 CCDC17Q96LX7 622 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 ZRANB1Q9UGI0 708 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 MLH3Q9UHC1 1453 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 PHLPP2Q6ZVD8 1323 aa9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 IRX3P78415 501 aaPredicted RBP9.39□□□□□ -0.91
MCF2L2-205ENST00000461074 VWA3AA6NCI4 1184 aa9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 EIF3CLB5ME19 914 aaKnown RBP9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 CWF19L2Q2TBE0 894 aaKnown RBP9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 TIGD1Q96MW7 591 aa9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 EIF3CQ99613 913 aaKnown RBP9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 LRWD1Q9UFC0 647 aa9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 SYNMO15061 1565 aa9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 PTPRKQ15262 1439 aa9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 XPOTO43592 962 aaKnown RBP9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 CCNT1O60563 726 aaKnown RBP9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 FAM76AQ8TAV0 307 aa9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 IPO4Q8TEX9 1081 aaKnown RBP9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 ERO1AQ96HE7 468 aa9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 CACYBPQ9HB71 228 aaKnown RBP9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 METTL14Q9HCE5 456 aaKnown RBP9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 NCKAP5LQ9HCH0 1330 aa9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 AOC3Q16853 763 aa9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 DCAF17Q5H9S7 520 aaPredicted RBP9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 ZBTB8OSQ8IWT0 167 aa9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 RAB3IPQ96QF0 476 aaPredicted RBP9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 PPFIBP2Q8ND30 876 aa9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 PA2G4Q9UQ80 394 aaKnown RBP9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 RNF123Q5XPI4 1314 aa9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 DISP1Q96F81 1524 aa9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 ARHGAP6O43182 974 aa9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 CIAO1O76071 339 aa9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 KRT5P13647 590 aa9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 NLRP12P59046 1061 aa9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 LACTBP83111 547 aaPredicted RBP9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 CSGALNACT2Q8N6G5 542 aa9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 KDM2BQ8NHM5 1336 aa9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 RPAP1Q9BWH6 1393 aaPredicted RBP9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 SH2D4BQ5SQS7 431 aa9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 ATP2A3Q93084 1043 aa9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 RAB17Q9H0T7 212 aa9.38□□□□□ -0.91
MCF2L2-205ENST00000461074 ITIH3Q06033 890 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 DPY19L2Q6NUT2 758 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 NLGN1Q8N2Q7 840 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 GRK7Q8WTQ7 553 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 LEO1Q8WVC0 666 aaPredicted RBP9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 CCDC114Q96M63 670 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 SH3BGRP55822 239 aaPredicted RBP9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 EVCP57679 992 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 ADGRL3Q9HAR2 1447 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 IGSF3O75054 1194 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 ZWINTO95229 277 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 POLR2BP30876 1174 aaKnown RBP9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 CTSWP56202 376 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 IGSF22Q8N9C0 903 aa9.37□□□□□ -0.91
MCF2L2-205ENST00000461074 FAM212AQ96EL1 285 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms