RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 ZNF274Q96GC6 653 aaPredicted RBP12.82□□□□□ -0.36
CSDC2-202ENST00000460790 ZSCAN10Q96SZ4 725 aaPredicted RBP12.82□□□□□ -0.36
CSDC2-202ENST00000460790 LY9Q9HBG7 655 aa12.82□□□□□ -0.36
CSDC2-202ENST00000460790 TCP11L1Q9NUJ3 509 aa12.82□□□□□ -0.36
CSDC2-202ENST00000460790 ASTN2O75129 1339 aaPredicted RBP12.82□□□□□ -0.36
CSDC2-202ENST00000460790 ERICH2A1L162 156 aa12.81□□□□□ -0.36
CSDC2-202ENST00000460790 DCAF8L1A6NGE4 600 aa12.81□□□□□ -0.36
CSDC2-202ENST00000460790 TBC1D12O60347 775 aa12.81□□□□□ -0.36
CSDC2-202ENST00000460790 MAP3K10Q02779 954 aa12.81□□□□□ -0.36
CSDC2-202ENST00000460790 RASA3Q14644 834 aa12.81□□□□□ -0.36
CSDC2-202ENST00000460790 SEC23AQ15436 765 aa12.81□□□□□ -0.36
CSDC2-202ENST00000460790 CCDC178Q5BJE1 867 aa12.81□□□□□ -0.36
CSDC2-202ENST00000460790 TATDN1Q6P1N9 297 aa12.81□□□□□ -0.36
CSDC2-202ENST00000460790 CRACR2BQ8N4Y2 399 aaPredicted RBP12.81□□□□□ -0.36
CSDC2-202ENST00000460790 NEDD1Q8NHV4 660 aa12.81□□□□□ -0.36
CSDC2-202ENST00000460790 CCDC17Q96LX7 622 aa12.81□□□□□ -0.36
CSDC2-202ENST00000460790 CSRNP1Q96S65 589 aa12.81□□□□□ -0.36
CSDC2-202ENST00000460790 ZKSCAN3Q9BRR0 538 aa12.81□□□□□ -0.36
CSDC2-202ENST00000460790 UBAC1Q9BSL1 405 aa12.81□□□□□ -0.36
CSDC2-202ENST00000460790 TMEM39BQ9GZU3 492 aa12.81□□□□□ -0.36
CSDC2-202ENST00000460790 DNAJC18Q9H819 358 aa12.81□□□□□ -0.36
CSDC2-202ENST00000460790 IL17RBQ9NRM6 502 aa12.81□□□□□ -0.36
CSDC2-202ENST00000460790 HERC5Q9UII4 1024 aaKnown RBP12.81□□□□□ -0.36
CSDC2-202ENST00000460790 BRPF3Q9ULD4 1205 aa12.81□□□□□ -0.36
CSDC2-202ENST00000460790 PFKFB2O60825 505 aa12.8□□□□□ -0.36
CSDC2-202ENST00000460790 LARGE1O95461 756 aa12.8□□□□□ -0.36
CSDC2-202ENST00000460790 TSPY3P0CV98 308 aa12.8□□□□□ -0.36
CSDC2-202ENST00000460790 TSPY8P0CW00 308 aa12.8□□□□□ -0.36
CSDC2-202ENST00000460790 SLURP2P0DP57 97 aa12.8□□□□□ -0.36
CSDC2-202ENST00000460790 PDIA3P30101 505 aaKnown RBP12.8□□□□□ -0.36
CSDC2-202ENST00000460790 WTAPQ15007 396 aa12.8□□□□□ -0.36
CSDC2-202ENST00000460790 ANGEL2Q5VTE6 544 aaKnown RBP12.8□□□□□ -0.36
CSDC2-202ENST00000460790 USP50Q70EL3 339 aaPredicted RBP12.8□□□□□ -0.36
CSDC2-202ENST00000460790 DGKHQ86XP1 1220 aa12.8□□□□□ -0.36
CSDC2-202ENST00000460790 APOBEC3FQ8IUX4 373 aaKnown RBP12.8□□□□□ -0.36
CSDC2-202ENST00000460790 ENAHQ8N8S7 591 aaPredicted RBP12.8□□□□□ -0.36
CSDC2-202ENST00000460790 ANKS1AQ92625 1134 aa12.8□□□□□ -0.36
CSDC2-202ENST00000460790 INTS4Q96HW7 963 aaKnown RBP12.8□□□□□ -0.36
CSDC2-202ENST00000460790 TEPSINQ96N21 525 aa12.8□□□□□ -0.36
CSDC2-202ENST00000460790 TRIM34Q9BYJ4 488 aa12.8□□□□□ -0.36
CSDC2-202ENST00000460790 DEFB129Q9H1M3 183 aa12.8□□□□□ -0.36
CSDC2-202ENST00000460790 SENP2Q9HC62 589 aa12.8□□□□□ -0.36
CSDC2-202ENST00000460790 TNKSO95271 1327 aa12.8□□□□□ -0.36
CSDC2-202ENST00000460790 PITPNM2Q9BZ72 1349 aa12.8□□□□□ -0.36
CSDC2-202ENST00000460790 WDR90Q96KV7 1748 aa12.79□□□□□ -0.36
CSDC2-202ENST00000460790 KLF18A0A0U1RQI7 1052 aa12.79□□□□□ -0.36
CSDC2-202ENST00000460790 POTECB2RU33 542 aa12.79□□□□□ -0.36
CSDC2-202ENST00000460790 NMT2O60551 498 aa12.79□□□□□ -0.36
CSDC2-202ENST00000460790 EPHX2P34913 555 aa12.79□□□□□ -0.36
CSDC2-202ENST00000460790 CERKLQ49MI3 558 aaPredicted RBP12.79□□□□□ -0.36
CSDC2-202ENST00000460790 SPRYD3Q8NCJ5 442 aa12.79□□□□□ -0.36
CSDC2-202ENST00000460790 SLKQ9H2G2 1235 aaPredicted RBP12.79□□□□□ -0.36
CSDC2-202ENST00000460790 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.79□□□□□ -0.36
CSDC2-202ENST00000460790 SCAF8Q9UPN6 1271 aaKnown RBP12.79□□□□□ -0.36
CSDC2-202ENST00000460790 GREB1LQ9C091 1923 aaPredicted RBP12.79□□□□□ -0.36
CSDC2-202ENST00000460790 UTRNP46939 3433 aa12.79□□□□□ -0.36
CSDC2-202ENST00000460790 IQCA1LA6NCM1 817 aa12.78□□□□□ -0.36
CSDC2-202ENST00000460790 CCDC69A6NI79 296 aa12.78□□□□□ -0.36
CSDC2-202ENST00000460790 FAM196BA6NMK8 535 aa12.78□□□□□ -0.36
CSDC2-202ENST00000460790 HSP90AA1P07900 732 aaKnown RBP12.78□□□□□ -0.36
CSDC2-202ENST00000460790 AKR1B1P15121 316 aa12.78□□□□□ -0.36
CSDC2-202ENST00000460790 NOVP48745 357 aa12.78□□□□□ -0.36
CSDC2-202ENST00000460790 ST3GAL1Q11201 340 aa12.78□□□□□ -0.36
CSDC2-202ENST00000460790 IFIT1BQ5T764 474 aaKnown RBP12.78□□□□□ -0.36
CSDC2-202ENST00000460790 RCSD1Q6JBY9 416 aa12.78□□□□□ -0.36
CSDC2-202ENST00000460790 NFXL1Q6ZNB6 911 aa12.78□□□□□ -0.36
CSDC2-202ENST00000460790 CDAN1Q8IWY9 1227 aa12.78□□□□□ -0.36
CSDC2-202ENST00000460790 NECAB1Q8N987 351 aa12.78□□□□□ -0.36
CSDC2-202ENST00000460790 ZC3H15Q8WU90 426 aaKnown RBP12.78□□□□□ -0.36
CSDC2-202ENST00000460790 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.78□□□□□ -0.36
CSDC2-202ENST00000460790 TAF1DQ9H5J8 278 aaPredicted RBP12.78□□□□□ -0.36
CSDC2-202ENST00000460790 GGA3Q9NZ52 723 aa12.78□□□□□ -0.36
CSDC2-202ENST00000460790 HPS5Q9UPZ3 1129 aa12.78□□□□□ -0.36
CSDC2-202ENST00000460790 PPP2R3BQ9Y5P8 575 aa12.78□□□□□ -0.36
CSDC2-202ENST00000460790 SLC12A7Q9Y666 1083 aa12.78□□□□□ -0.36
CSDC2-202ENST00000460790 PLIN4Q96Q06 1357 aa12.78□□□□□ -0.36
CSDC2-202ENST00000460790 IGKV6D-41A0A0C4DH26 115 aa12.77□□□□□ -0.37
CSDC2-202ENST00000460790 RCAN1P53805 252 aa12.77□□□□□ -0.37
CSDC2-202ENST00000460790 SCRN1Q12765 414 aa12.77□□□□□ -0.37
CSDC2-202ENST00000460790 STK3Q13188 491 aa12.77□□□□□ -0.37
CSDC2-202ENST00000460790 APOA5Q6Q788 366 aa12.77□□□□□ -0.37
CSDC2-202ENST00000460790 SYNE3Q6ZMZ3 975 aa12.77□□□□□ -0.37
CSDC2-202ENST00000460790 CCDC83Q8IWF9 413 aa12.77□□□□□ -0.37
CSDC2-202ENST00000460790 GTF3C6Q969F1 213 aa12.77□□□□□ -0.37
CSDC2-202ENST00000460790 CHMP4CQ96CF2 233 aa12.77□□□□□ -0.37
CSDC2-202ENST00000460790 FOXD4L1Q9NU39 408 aa12.77□□□□□ -0.37
CSDC2-202ENST00000460790 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.77□□□□□ -0.37
CSDC2-202ENST00000460790 MYH4Q9Y623 1939 aa12.77□□□□□ -0.37
CSDC2-202ENST00000460790 ZBTB43O43298 467 aa12.76□□□□□ -0.37
CSDC2-202ENST00000460790 CCT2P78371 535 aaKnown RBP12.76□□□□□ -0.37
CSDC2-202ENST00000460790 RRP1BQ14684 758 aaKnown RBP12.76□□□□□ -0.37
CSDC2-202ENST00000460790 NBPF12Q5TAG4 269 aaPredicted RBP12.76□□□□□ -0.37
CSDC2-202ENST00000460790 MIGA2Q7L4E1 593 aa12.76□□□□□ -0.37
CSDC2-202ENST00000460790 DCPSQ96C86 337 aaKnown RBP12.76□□□□□ -0.37
CSDC2-202ENST00000460790 HOOK2Q96ED9 719 aa12.76□□□□□ -0.37
CSDC2-202ENST00000460790 CEP95Q96GE4 821 aa12.76□□□□□ -0.37
CSDC2-202ENST00000460790 CWC22Q9HCG8 908 aaKnown RBP12.76□□□□□ -0.37
CSDC2-202ENST00000460790 MTMR4Q9NYA4 1195 aa12.76□□□□□ -0.37
CSDC2-202ENST00000460790 NAP1L2Q9ULW6 460 aaPredicted RBP12.76□□□□□ -0.37
CSDC2-202ENST00000460790 GOLGA8BA8MQT2 603 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms