RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 SYN1P17600 705 aa16.72■□□□□ 0.27
SCAMP4-206ENST00000460767 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.72■□□□□ 0.27
SCAMP4-206ENST00000460767 DBNDD2Q9BQY9 259 aa16.72■□□□□ 0.27
SCAMP4-206ENST00000460767 PCDHB15Q9Y5E8 787 aa16.72■□□□□ 0.27
SCAMP4-206ENST00000460767 MROH7-TTC4A0A0A0MT08 1334 aa16.71■□□□□ 0.27
SCAMP4-206ENST00000460767 MCAMP43121 646 aa16.71■□□□□ 0.27
SCAMP4-206ENST00000460767 BTDP43251 543 aa16.71■□□□□ 0.27
SCAMP4-206ENST00000460767 RHBDL3P58872 404 aa16.71■□□□□ 0.27
SCAMP4-206ENST00000460767 TRIM32Q13049 653 aa16.71■□□□□ 0.27
SCAMP4-206ENST00000460767 HSP90AB4PQ58FF6 505 aa16.71■□□□□ 0.27
SCAMP4-206ENST00000460767 DZIP1Q86YF9 867 aaKnown RBP16.71■□□□□ 0.27
SCAMP4-206ENST00000460767 ERC1Q8IUD2 1116 aa16.71■□□□□ 0.27
SCAMP4-206ENST00000460767 RHPN1Q8TCX5 695 aa16.71■□□□□ 0.27
SCAMP4-206ENST00000460767 ZNF384Q8TF68 577 aa16.71■□□□□ 0.27
SCAMP4-206ENST00000460767 ASCC2Q9H1I8 757 aaPredicted RBP16.71■□□□□ 0.27
SCAMP4-206ENST00000460767 TLR7Q9NYK1 1049 aaKnown RBP16.71■□□□□ 0.27
SCAMP4-206ENST00000460767 HMG20BQ9P0W2 317 aa16.71■□□□□ 0.27
SCAMP4-206ENST00000460767 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.71■□□□□ 0.27
SCAMP4-206ENST00000460767 MYO5AQ9Y4I1 1855 aaKnown RBP16.71■□□□□ 0.27
SCAMP4-206ENST00000460767 GPR75-ASB3A0A0A6YYF3 556 aa16.7■□□□□ 0.26
SCAMP4-206ENST00000460767 SPP2Q13103 211 aa16.7■□□□□ 0.26
SCAMP4-206ENST00000460767 SIPA1L1O43166 1804 aa16.69■□□□□ 0.26
SCAMP4-206ENST00000460767 LTBP2Q14767 1821 aa16.69■□□□□ 0.26
SCAMP4-206ENST00000460767 RAB11FIP3O75154 756 aa16.69■□□□□ 0.26
SCAMP4-206ENST00000460767 SLURP2P0DP57 97 aa16.69■□□□□ 0.26
SCAMP4-206ENST00000460767 PRKAR2AP13861 404 aaKnown RBP16.69■□□□□ 0.26
SCAMP4-206ENST00000460767 HOXA7P31268 230 aaPredicted RBP16.69■□□□□ 0.26
SCAMP4-206ENST00000460767 CAP2P40123 477 aa16.69■□□□□ 0.26
SCAMP4-206ENST00000460767 SPTY2D1Q68D10 685 aaPredicted RBP16.69■□□□□ 0.26
SCAMP4-206ENST00000460767 PI16Q6UXB8 463 aa16.69■□□□□ 0.26
SCAMP4-206ENST00000460767 CCDC84Q86UT8 332 aaPredicted RBP16.69■□□□□ 0.26
SCAMP4-206ENST00000460767 KIF1BPQ96EK5 621 aa16.69■□□□□ 0.26
SCAMP4-206ENST00000460767 NEUROD6Q96NK8 337 aa16.69■□□□□ 0.26
SCAMP4-206ENST00000460767 GUCD1Q96NT3 240 aa16.69■□□□□ 0.26
SCAMP4-206ENST00000460767 CRBNQ96SW2 442 aa16.69■□□□□ 0.26
SCAMP4-206ENST00000460767 NUDT12Q9BQG2 462 aa16.69■□□□□ 0.26
SCAMP4-206ENST00000460767 DCTPP1Q9H773 170 aa16.69■□□□□ 0.26
SCAMP4-206ENST00000460767 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.69■□□□□ 0.26
SCAMP4-206ENST00000460767 AS3MTQ9HBK9 375 aa16.69■□□□□ 0.26
SCAMP4-206ENST00000460767 USP17L5A8MUK1 530 aa16.68■□□□□ 0.26
SCAMP4-206ENST00000460767 HMGCS2P54868 508 aa16.68■□□□□ 0.26
SCAMP4-206ENST00000460767 PICALMQ13492 652 aa16.68■□□□□ 0.26
SCAMP4-206ENST00000460767 SPATA5Q8NB90 893 aa16.68■□□□□ 0.26
SCAMP4-206ENST00000460767 USP6NLQ92738 828 aa16.68■□□□□ 0.26
SCAMP4-206ENST00000460767 WDR18Q9BV38 432 aa16.68■□□□□ 0.26
SCAMP4-206ENST00000460767 HERC5Q9UII4 1024 aaKnown RBP16.68■□□□□ 0.26
SCAMP4-206ENST00000460767 UQCRFS1P1P0C7P4 283 aa16.67■□□□□ 0.26
SCAMP4-206ENST00000460767 OS9Q13438 667 aaPredicted RBP16.67■□□□□ 0.26
SCAMP4-206ENST00000460767 AAMPQ13685 434 aa16.67■□□□□ 0.26
SCAMP4-206ENST00000460767 LHX8Q68G74 356 aa16.67■□□□□ 0.26
SCAMP4-206ENST00000460767 GTF3C2Q8WUA4 911 aaPredicted RBP16.67■□□□□ 0.26
SCAMP4-206ENST00000460767 A0A0C4DFX4 3053 aa16.66■□□□□ 0.26
SCAMP4-206ENST00000460767 IGSF3O75054 1194 aa16.66■□□□□ 0.26
SCAMP4-206ENST00000460767 MAPK4P31152 587 aa16.66■□□□□ 0.26
SCAMP4-206ENST00000460767 LRRC26Q2I0M4 334 aa16.66■□□□□ 0.26
SCAMP4-206ENST00000460767 CCDC8Q9H0W5 538 aaPredicted RBP16.66■□□□□ 0.26
SCAMP4-206ENST00000460767 FOCADQ5VW36 1801 aa16.66■□□□□ 0.26
SCAMP4-206ENST00000460767 CYP2E1P05181 493 aaPredicted RBP16.65■□□□□ 0.26
SCAMP4-206ENST00000460767 ZKSCAN1P17029 563 aaPredicted RBP16.65■□□□□ 0.26
SCAMP4-206ENST00000460767 BACE1P56817 501 aa16.65■□□□□ 0.26
SCAMP4-206ENST00000460767 IRX3P78415 501 aaPredicted RBP16.65■□□□□ 0.26
SCAMP4-206ENST00000460767 MECOMQ03112 1051 aa16.65■□□□□ 0.26
SCAMP4-206ENST00000460767 CACNB2Q08289 660 aaPredicted RBP16.65■□□□□ 0.26
SCAMP4-206ENST00000460767 GPRC5AQ8NFJ5 357 aa16.65■□□□□ 0.26
SCAMP4-206ENST00000460767 APBA2Q99767 749 aa16.65■□□□□ 0.26
SCAMP4-206ENST00000460767 IL1RAPL2Q9NP60 686 aa16.65■□□□□ 0.26
SCAMP4-206ENST00000460767 GINM1Q9NU53 330 aa16.65■□□□□ 0.26
SCAMP4-206ENST00000460767 ABCF2Q9UG63 623 aa16.65■□□□□ 0.26
SCAMP4-206ENST00000460767 FAM196BA6NMK8 535 aa16.64■□□□□ 0.25
SCAMP4-206ENST00000460767 C19orf81C9J6K1 198 aa16.64■□□□□ 0.25
SCAMP4-206ENST00000460767 CYP2B6P20813 491 aa16.64■□□□□ 0.25
SCAMP4-206ENST00000460767 RGS2P41220 211 aa16.64■□□□□ 0.25
SCAMP4-206ENST00000460767 HERVK_113P62684 666 aa16.64■□□□□ 0.25
SCAMP4-206ENST00000460767 MORN1Q5T089 497 aa16.64■□□□□ 0.25
SCAMP4-206ENST00000460767 AACSQ86V21 672 aa16.64■□□□□ 0.25
SCAMP4-206ENST00000460767 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.64■□□□□ 0.25
SCAMP4-206ENST00000460767 NSUN4Q96CB9 384 aaKnown RBP16.64■□□□□ 0.25
SCAMP4-206ENST00000460767 TXNRD2Q9NNW7 524 aa16.64■□□□□ 0.25
SCAMP4-206ENST00000460767 LDHCP07864 332 aa16.63■□□□□ 0.25
SCAMP4-206ENST00000460767 ASNSP08243 561 aa16.63■□□□□ 0.25
SCAMP4-206ENST00000460767 GSTO1P78417 241 aa16.63■□□□□ 0.25
SCAMP4-206ENST00000460767 HDAC1Q13547 482 aaPredicted RBP16.63■□□□□ 0.25
SCAMP4-206ENST00000460767 RRP1BQ14684 758 aaKnown RBP16.63■□□□□ 0.25
SCAMP4-206ENST00000460767 CCDC158Q5M9N0 1113 aa16.63■□□□□ 0.25
SCAMP4-206ENST00000460767 ERICH6Q7L0X2 663 aa16.63■□□□□ 0.25
SCAMP4-206ENST00000460767 METTL16Q86W50 562 aaKnown RBP16.63■□□□□ 0.25
SCAMP4-206ENST00000460767 UNC80Q8N2C7 3258 aa16.63■□□□□ 0.25
SCAMP4-206ENST00000460767 MSCO60682 206 aa16.62■□□□□ 0.25
SCAMP4-206ENST00000460767 CCND3P30281 292 aaPredicted RBP16.62■□□□□ 0.25
SCAMP4-206ENST00000460767 ERVK-9P63128 1117 aa16.62■□□□□ 0.25
SCAMP4-206ENST00000460767 ERVK-24P63145 666 aa16.62■□□□□ 0.25
SCAMP4-206ENST00000460767 MDM2Q00987 491 aaPredicted RBP16.62■□□□□ 0.25
SCAMP4-206ENST00000460767 MTMR2Q13614 643 aa16.62■□□□□ 0.25
SCAMP4-206ENST00000460767 GORABQ5T7V8 394 aa16.62■□□□□ 0.25
SCAMP4-206ENST00000460767 ZNF697Q5TEC3 545 aa16.62■□□□□ 0.25
SCAMP4-206ENST00000460767 TBC1D9Q6ZT07 1266 aa16.62■□□□□ 0.25
SCAMP4-206ENST00000460767 GPR142Q7Z601 462 aa16.62■□□□□ 0.25
SCAMP4-206ENST00000460767 CLASRPQ8N2M8 674 aaKnown RBP16.62■□□□□ 0.25
SCAMP4-206ENST00000460767 DHX36Q9H2U1 1008 aaKnown RBP16.62■□□□□ 0.25
SCAMP4-206ENST00000460767 TMOD4Q9NZQ9 345 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms