RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 USP17L3A6NCW0 530 aa7.3□□□□□ -1.24
PTPN12-209ENST00000460731 USP17L4A6NCW7 530 aa7.3□□□□□ -1.24
PTPN12-209ENST00000460731 PALM3A6NDB9 673 aaPredicted RBP7.3□□□□□ -1.24
PTPN12-209ENST00000460731 CT47B1P0C2W7 299 aaPredicted RBP7.3□□□□□ -1.24
PTPN12-209ENST00000460731 SIK1P57059 783 aa7.3□□□□□ -1.24
PTPN12-209ENST00000460731 SLC39A6Q13433 755 aa7.3□□□□□ -1.24
PTPN12-209ENST00000460731 USP17L2Q6R6M4 530 aa7.3□□□□□ -1.24
PTPN12-209ENST00000460731 Q6ZS46 218 aa7.3□□□□□ -1.24
PTPN12-209ENST00000460731 USP17L1Q7RTZ2 530 aa7.3□□□□□ -1.24
PTPN12-209ENST00000460731 TMEM130Q8N3G9 435 aa7.3□□□□□ -1.24
PTPN12-209ENST00000460731 TEX13AQ9BXU3 409 aaPredicted RBP7.3□□□□□ -1.24
PTPN12-209ENST00000460731 KRTAP4-7Q9BYR0 210 aa7.3□□□□□ -1.24
PTPN12-209ENST00000460731 MYH16Q9H6N6 1097 aa7.3□□□□□ -1.24
PTPN12-209ENST00000460731 C11orf16Q9NQ32 467 aa7.3□□□□□ -1.24
PTPN12-209ENST00000460731 MIS18AQ9NYP9 233 aa7.3□□□□□ -1.24
PTPN12-209ENST00000460731 PALLDQ8WX93 1383 aa7.3□□□□□ -1.24
PTPN12-209ENST00000460731 LY75O60449 1722 aa7.3□□□□□ -1.24
PTPN12-209ENST00000460731 FANCIQ9NVI1 1328 aa7.29□□□□□ -1.24
PTPN12-209ENST00000460731 KIAA1324LA8MWY0 1029 aaPredicted RBP7.29□□□□□ -1.24
PTPN12-209ENST00000460731 VAMP4O75379 141 aa7.29□□□□□ -1.24
PTPN12-209ENST00000460731 SNRPA1P09661 255 aaKnown RBP7.29□□□□□ -1.24
PTPN12-209ENST00000460731 SSTR4P31391 388 aa7.29□□□□□ -1.24
PTPN12-209ENST00000460731 INPP5BP32019 993 aa7.29□□□□□ -1.24
PTPN12-209ENST00000460731 RTN1Q16799 776 aa7.29□□□□□ -1.24
PTPN12-209ENST00000460731 TXNRD1Q16881 649 aa7.29□□□□□ -1.24
PTPN12-209ENST00000460731 LCE1DQ5T752 114 aa7.29□□□□□ -1.24
PTPN12-209ENST00000460731 OGFOD1Q8N543 542 aa7.29□□□□□ -1.24
PTPN12-209ENST00000460731 C8orf58Q8NAV2 365 aa7.29□□□□□ -1.24
PTPN12-209ENST00000460731 ADAMTS19Q8TE59 1207 aa7.29□□□□□ -1.24
PTPN12-209ENST00000460731 ZNF428Q96B54 188 aa7.29□□□□□ -1.24
PTPN12-209ENST00000460731 TSPYL4Q9UJ04 414 aa7.29□□□□□ -1.24
PTPN12-209ENST00000460731 MED26O95402 600 aa7.28□□□□□ -1.24
PTPN12-209ENST00000460731 CYP19A1P11511 503 aaPredicted RBP7.28□□□□□ -1.24
PTPN12-209ENST00000460731 YBX3P16989 372 aaKnown RBP eCLIP7.28□□□□□ -1.24
PTPN12-209ENST00000460731 GPLD1P80108 840 aa7.28□□□□□ -1.24
PTPN12-209ENST00000460731 ITPK1Q13572 414 aa7.28□□□□□ -1.24
PTPN12-209ENST00000460731 DHX32Q7L7V1 743 aaKnown RBP7.28□□□□□ -1.24
PTPN12-209ENST00000460731 LRP10Q7Z4F1 713 aa7.28□□□□□ -1.24
PTPN12-209ENST00000460731 SYTL4Q96C24 671 aaPredicted RBP7.28□□□□□ -1.24
PTPN12-209ENST00000460731 UCN2Q96RP3 112 aa7.28□□□□□ -1.24
PTPN12-209ENST00000460731 CHMP4AQ9BY43 222 aa7.28□□□□□ -1.24
PTPN12-209ENST00000460731 AKTIPQ9H8T0 292 aa7.28□□□□□ -1.24
PTPN12-209ENST00000460731 USP16Q9Y5T5 823 aa7.28□□□□□ -1.24
PTPN12-209ENST00000460731 PTCD1O75127 700 aaKnown RBP7.27□□□□□ -1.25
PTPN12-209ENST00000460731 INTS5Q6P9B9 1019 aaKnown RBP7.27□□□□□ -1.25
PTPN12-209ENST00000460731 ELMSAN1Q6PJG2 1045 aa7.27□□□□□ -1.25
PTPN12-209ENST00000460731 TTC5Q8N0Z6 440 aa7.27□□□□□ -1.25
PTPN12-209ENST00000460731 TSPYL6Q8N831 410 aa7.27□□□□□ -1.25
PTPN12-209ENST00000460731 TSR2Q969E8 191 aaKnown RBP7.27□□□□□ -1.25
PTPN12-209ENST00000460731 MYH14Q7Z406 1995 aaKnown RBP7.27□□□□□ -1.25
PTPN12-209ENST00000460731 CNTNAP4Q9C0A0 1308 aa7.27□□□□□ -1.25
PTPN12-209ENST00000460731 CACNA1FO60840 1977 aa7.26□□□□□ -1.25
PTPN12-209ENST00000460731 F8W735 103 aaPredicted RBP7.26□□□□□ -1.25
PTPN12-209ENST00000460731 STARD3NLO95772 234 aa7.26□□□□□ -1.25
PTPN12-209ENST00000460731 EIF5P55010 431 aaKnown RBP7.26□□□□□ -1.25
PTPN12-209ENST00000460731 EXOSC9Q06265 439 aaKnown RBP7.26□□□□□ -1.25
PTPN12-209ENST00000460731 KRT24Q2M2I5 525 aa7.26□□□□□ -1.25
PTPN12-209ENST00000460731 DEFB132Q7Z7B7 95 aa7.26□□□□□ -1.25
PTPN12-209ENST00000460731 DNAJC10Q8IXB1 793 aa7.26□□□□□ -1.25
PTPN12-209ENST00000460731 IFT43Q96FT9 208 aa7.26□□□□□ -1.25
PTPN12-209ENST00000460731 CCNL1Q9UK58 526 aaPredicted RBP7.26□□□□□ -1.25
PTPN12-209ENST00000460731 OAS3Q9Y6K5 1087 aaKnown RBP7.26□□□□□ -1.25
PTPN12-209ENST00000460731 C5P01031 1676 aa7.25□□□□□ -1.25
PTPN12-209ENST00000460731 RREB1Q92766 1687 aa7.25□□□□□ -1.25
PTPN12-209ENST00000460731 TAF1LQ8IZX4 1826 aa7.25□□□□□ -1.25
PTPN12-209ENST00000460731 PRAMEF22A3QJZ6 481 aa7.25□□□□□ -1.25
PTPN12-209ENST00000460731 RPS6KA4O75676 772 aa7.25□□□□□ -1.25
PTPN12-209ENST00000460731 ALX3O95076 343 aa7.25□□□□□ -1.25
PTPN12-209ENST00000460731 IRAK1P51617 712 aa7.25□□□□□ -1.25
PTPN12-209ENST00000460731 SF3B2Q13435 895 aaKnown RBP7.25□□□□□ -1.25
PTPN12-209ENST00000460731 EZH2Q15910 746 aaKnown RBP7.25□□□□□ -1.25
PTPN12-209ENST00000460731 TWISTNBQ3B726 338 aaPredicted RBP7.25□□□□□ -1.25
PTPN12-209ENST00000460731 ALDH1L2Q3SY69 923 aa7.25□□□□□ -1.25
PTPN12-209ENST00000460731 LINC00116Q8NCU8 138 aa7.25□□□□□ -1.25
PTPN12-209ENST00000460731 SCG3Q8WXD2 468 aaKnown RBP7.25□□□□□ -1.25
PTPN12-209ENST00000460731 MRPL18Q9H0U6 180 aaKnown RBP7.25□□□□□ -1.25
PTPN12-209ENST00000460731 MKRN1Q9UHC7 482 aaKnown RBP7.25□□□□□ -1.25
PTPN12-209ENST00000460731 LAS1LQ9Y4W2 734 aaKnown RBP7.25□□□□□ -1.25
PTPN12-209ENST00000460731 ARID1BQ8NFD5 2236 aaPredicted RBP7.25□□□□□ -1.25
PTPN12-209ENST00000460731 COL5A3P25940 1745 aaPredicted RBP7.24□□□□□ -1.25
PTPN12-209ENST00000460731 TJP1Q07157 1748 aa7.24□□□□□ -1.25
PTPN12-209ENST00000460731 ATP9BO43861 1147 aa7.24□□□□□ -1.25
PTPN12-209ENST00000460731 EPB42P16452 691 aa7.24□□□□□ -1.25
PTPN12-209ENST00000460731 TARSP26639 723 aaKnown RBP7.24□□□□□ -1.25
PTPN12-209ENST00000460731 IL6STP40189 918 aaPredicted RBP7.24□□□□□ -1.25
PTPN12-209ENST00000460731 CRKLP46109 303 aaKnown RBP7.24□□□□□ -1.25
PTPN12-209ENST00000460731 SMG9Q9H0W8 520 aaKnown RBP7.24□□□□□ -1.25
PTPN12-209ENST00000460731 DDX21Q9NR30 783 aaKnown RBP eCLIP7.24□□□□□ -1.25
PTPN12-209ENST00000460731 CCDC87Q9NVE4 849 aa7.24□□□□□ -1.25
PTPN12-209ENST00000460731 A1BGP04217 495 aa7.23□□□□□ -1.25
PTPN12-209ENST00000460731 TAL1P17542 331 aaPredicted RBP7.23□□□□□ -1.25
PTPN12-209ENST00000460731 IDH3AP50213 366 aa7.23□□□□□ -1.25
PTPN12-209ENST00000460731 RARSP54136 660 aaKnown RBP7.23□□□□□ -1.25
PTPN12-209ENST00000460731 NRLP54845 237 aa7.23□□□□□ -1.25
PTPN12-209ENST00000460731 MLLT1Q03111 559 aaPredicted RBP7.23□□□□□ -1.25
PTPN12-209ENST00000460731 CCDC30Q5VVM6 783 aa7.23□□□□□ -1.25
PTPN12-209ENST00000460731 AMIGO3Q86WK7 504 aa7.23□□□□□ -1.25
PTPN12-209ENST00000460731 ZNF594Q96JF6 807 aaPredicted RBP7.23□□□□□ -1.25
PTPN12-209ENST00000460731 DBF4Q9UBU7 674 aaPredicted RBP7.23□□□□□ -1.25
PTPN12-209ENST00000460731 IBTKQ9P2D0 1353 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms